Salmo trutta (river trout): 115177964
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Entry
115177964 CDS
T08542
Name
(RefSeq) integrin alpha-L
KO
K05718
integrin alpha L
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecule (CAM) interaction
stru04517
IgSF CAM signaling
stru04518
Integrin signaling
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115177964
04517 IgSF CAM signaling
115177964
04518 Integrin signaling
115177964
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115177964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115177964
04515 Cell adhesion molecules [BR:
stru04515
]
115177964
04090 CD molecules [BR:
stru04090
]
115177964
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115177964
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115177964
CD molecules [BR:
stru04090
]
Proteins
115177964
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
ITGAX-like_Ig_3
VWA_2
FG-GAP_3
FG-GAP_2
Copine
GDU_TM
Mid2
vWA_Rv0959
Motif
Other DBs
NCBI-GeneID:
115177964
NCBI-ProteinID:
XP_029594827
LinkDB
All DBs
Position
38:complement(13932723..13959735)
Genome browser
AA seq
1187 aa
AA seq
DB search
MSRQGPLCLLTCMAAMAVSSMAFNIDEANPKIYKGAEQDFFGYKVLQFISGKEKGVMVSA
PHQKNGSGGICRCAQDRTNCTDCYTPEETDTIKYIGLSMAGQSTSPPTFTACSPGLAHEC
DGNSYLNSICYQFNSQLHITSNFTPAFQECTKKIVDLVFLFDGSGSMTVDEFDKNKGFIN
NIMTTLKNSSIKFAAVQFSTNTRTVFNFRDYQEERALDNLWKEKHMADLTNTHKAIDFVL
NNIFENQAAGATADATKVLVIITDGNPSDSDRRLNSIKRSDEKNIIRFVIGVKNVDLTKL
KSLASEPKENNTFLIEDYNGLKGILDNFQKKIFNIEGSKTALAGNLTKEMSQSGFSAVYV
DKDTLVLGSVGSNNWRGSLFETEGLRSEEREIQDPTLDKDSYMGYSVAVGKKNENLLYFT
GAPRSEHMGRILLFNKVNNNWIVAQRLPGEQMGSYFGAELCSVDIDSDGNTDFLLVGAPM
FHQPPREGRIYVYTLSDKLELRMEMNVSVLSQGRFGSSISSLTDLNGDGLKDVAVGAPLE
DDHRGAVYIYLGEKLKGIRPEFSQRISAVMMRSKLQFFGQSIDGKMDLGEDGLTDIVVGA
RGAVVVLRSRPVLSISAHLHFHPSEISTDRFDCLAKEIISPVVTLTACFNMAEATKSKAE
VLSAGMNVSYSLDVDPVRQRSRAFYSDTNKGARSLLSTVELRKERTCFNHSVYMTQCVID
TLSPIIIQLHFSQSESQQEGLTAMLNTASPTQAVVEVPFEKNCKENEICVAELEVDFNFI
TSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFSMMHLLKSTRRTVFSCGGLE
GEMDRTTCSVSIPVYRSKTTAVFTSKFHVLNTYDWNDTMEMTVIGLSDNGNSINSSLTRT
IPVQFAVDLVVKALPQDSTTYMNFTLEDTSPKRLVNVYEVQNLGFMPVPVTVTFTFPTKL
EHKFEMKDYQISVLQNHTQCGKIINSTTEYRSPEKSIECESFLLEKFSTITFVLSGNVSF
KDLDQHARSLSLPKKFTGDRETVHFISFVKLSYDKKRFVQTASDPRDNSSSFHQTQIDVQ
AEIIIPPHRDLIIGTGVGVGLFLLIIITMAMYMLGCFKRKRPVDNAQEDEKEGEQCEQEL
QPESGAKESNLLLDDSQTENNGFPTSEAVGEGPKEKQDASVRSRLME
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcagggacccctctgcctactcacctgcatggcagccatggctgtctcttca
atggctttcaacatcgatgaagcaaacccaaaaatctacaagggggcggaacaggatttc
tttggatacaaagtcctgcaattcatatctggcaaggagaaaggggtaatggtcagtgcg
ccacatcagaagaacggatctggtggaatctgtagatgtgctcaagaccgaacaaactgt
acagactgttacactcctgaagaaactgacacaatcaagtacattggactgtctatggct
ggacaatctacttctcctccaacgttcactgcctgcagccctggcctggcacacgagtgt
gatgggaactcctatctgaacagtatctgttatcagttcaacagccagctccacatcacc
tcgaacttcacacctgccttccaagaatgtactaagaaaatagtggacctcgttttcctc
tttgacggatcaggaagcatgacagtggatgaatttgataagaacaaaggtttcataaac
aatatcatgacaaccctaaaaaactcctcaattaagttcgcagcggttcagttctcaaca
aacaccaggacagttttcaacttcagagactaccaagaggagagagccttggataatctt
tggaaagaaaagcacatggctgatctaaccaacacacataaggcgatagactttgtcttg
aacaacatttttgaaaaccaagctgccggcgccaccgcagatgcaactaaagtactggtc
ataataacagatggaaatcccagtgatagtgatagaaggttaaactctatcaaaagaagt
gatgagaaaaacatcatccgctttgtcatcggggtcaagaatgtcgatttgacgaaacta
aagtccctggcatcagagccaaaagagaacaacactttcctcatcgaggactacaacgga
ctaaaaggaatccttgacaactttcaaaaaaagatcttcaacattgaaggttccaagact
gctctggctggaaacttgactaaggagatgtctcagagtgggttcagtgctgtctacgtt
gataaggacaccttggttctgggctcagtgggatcaaacaactggcgtggatctctcttt
gagactgagggtctgagatcagaggaaagggaaattcaggaccccacattggacaaagat
tcctatatgggatactctgtagctgttgggaagaagaatgagaaccttctatattttacc
ggagcaccaagatctgaacacatgggacggatcctactttttaacaaggttaacaacaac
tggattgtggcacaaagattgcctggagaacagatgggctcctacttcggggcagagctg
tgttctgtggacatagactcagacggcaacacagacttcctactggtgggtgcaccaatg
tttcaccaacctccgagagagggcaggatctacgtctacacactgagtgataagctggaa
ctgaggatggagatgaatgtttcagtgctgtctcagggtagattcggctcctccatctcg
tctctcacagacctgaatggagatgggctgaaggatgtagctgtgggcgctccacttgag
gatgatcacaggggggccgtgtacatctacctgggtgaaaagctaaaggggatccgccct
gaattcagccagcgcatctcagctgtgatgatgagatctaagctccagttctttggccag
tcaattgatgggaagatggacctgggtgaggatggactgactgatatcgtagtaggagcg
cgtggcgcagttgttgtcttgaggtccagaccggtcctcagcatctctgctcatctccac
ttccatccctcggagatcagcactgatagatttgactgtctggcaaaagagatcatttcc
cccgtggtcactttaacagcctgctttaacatggcagaggcaacaaagagtaaagctgag
gtgctgagtgcagggatgaacgtctcctactcgctggatgtggatccagtgagacagagg
agccgagccttttacagtgacacgaacaaaggggccagaagtcttctctctacagtggag
ctgagaaaggagcggacttgcttcaaccactcagtctacatgacacaatgcgtgatcgac
acattatcgcccataatcatccaacttcatttttctcaatctgaaagccaacaagagggt
cttactgccatgctgaatactgccagtcctacacaggctgtggtcgaggtgccctttgaa
aagaactgcaaagaaaatgaaatatgtgtggcagagcttgaggtggacttcaactttatc
acatcaactttattagtggtggaccagagttacttcaacgtgactataagactgtccaat
cacggggatgactcctacaacaccagtctaactctcctctaccctcctggcctctcattc
tccatgatgcatcttctgaagtctacaaggagaacggtgttcagctgtggtggtctggaa
ggtgaaatggacagaactacatgcagtgtcagcataccggtctaccgtagtaaaactaca
gcagtgttcaccagtaaattccatgttttgaatacatacgactggaacgacacaatggag
atgaccgtcatcggactgagtgacaatggaaactcaatcaatagttcccttaccaggacc
atccctgttcaatttgcagttgacctggtagtaaaagcccttccccaagactccaccact
tacatgaactttactctggaggacacatcacctaaaagactggtgaatgtatatgaggtg
cagaacttaggctttatgcctgtacccgtcacagtcaccttcactttcccaactaagctt
gagcacaaatttgaaatgaaggactaccaaatatctgtcttacagaaccatactcaatgt
ggaaagattatcaattcaacaacagagtaccgctctccagaaaaatcgattgagtgtgaa
agtttccttttggagaagttttcgacaattacatttgtgctgtctggaaatgtttccttc
aaggacctcgatcaacatgcaaggagcttgtcattgccaaagaaattcactggggataga
gaaacagtccatttcatcagttttgtgaaactcagctatgacaaaaaacgatttgtccag
acagcgagtgacccaagggataactcttcaagcttccaccaaacacagattgatgttcag
gctgagatcatcattcctccccatagagacctgataatagggacaggagttggagtagga
ctcttcctcctgatcatcatcacaatggccatgtatatgctgggatgtttcaagagaaaa
aggcctgttgataatgcacaggaagatgagaaagaaggggaacagtgtgagcaagagcta
cagcctgagagtggagcaaaggagtcaaaccttctccttgacgacagtcaaacagaaaac
aatggcttccccactagtgaggcggtaggggagggaccaaaagagaagcaggatgcgtca
gtcagaagcaggctaatggagtag
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integrated database retrieval system
