Salmo trutta (river trout): 115177980
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Entry
115177980 CDS
T08542
Name
(RefSeq) zinc finger protein 180-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115177980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115177980
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115177980
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2HE
zf-C2H2_6
C2CH-3rd_BIRD-IDD
Zn-ribbon_8
zf_UBZ
Zn_ribbon_SprT
zf-C2H2_jaz
C1_1
XPA_N
zf-C2H2_11
DUF1016_N
Motif
Other DBs
NCBI-GeneID:
115177980
NCBI-ProteinID:
XP_029594853
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Position
38:24254788..24262630
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AA seq
387 aa
AA seq
DB search
MDCFTSFYEPEELRRHTCRPHPCSDCSGSFICPTHLKSKQTQKRRKVYPCGQCGKRFQTP
SKLKTHQRTHTGEKPYHCSVCGKGFSQSNQLKTHQRTHTGQKPYHCSQCGKSFSWLHSLK
THQITHTGEKPYHCSQCVKRFSLVGNLKRHQLTHTVEKPYLCSHCGKSFSQLHHLKTHQL
IHTGEKPYHCSQCGKSFSHPKDLKSHQRTHTGEKPFHCSQCGKSFSQLSTLKKHQLTHTG
EKPYHCSQCGKRFTRLYQLKAHQITHTEEKPYHCSQCGDSFTSSYFLKKHQLIHTGEKPF
HCSQCGKNFSHSSTLKTHQITHTGEKPHRCSQCGKSFGHSSTLKTHQITHTGEKPHRCSQ
CGKSFSQSSTLKKHQRTHSGGKLCHQS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggactgcttcactagtttctatgagccagaggagttgagaaggcacacttgtaggccc
cacccctgctcagattgcagtggcagctttatttgcccaactcacctcaaatcaaaacag
actcaaaaaaggaggaaggtgtacccatgtggtcaatgtgggaagagatttcaaacacca
agcaaactaaagacgcaccagagaactcacacaggagagaagccgtaccactgctctgtt
tgtgggaagggtttcagtcagtcgaaccaactaaagacacaccagagaactcacacagga
cagaagccttaccactgctctcagtgtggaaagagtttcagttggttacacagcctgaag
actcaccagataactcacacaggggagaagccttaccattgctcgcagtgtgtaaagcgt
ttcagtctggtaggaaacctaaagagacaccagctaacacacacagtagagaagccttac
ctctgctctcattgtgggaagagtttcagtcagttacaccatctaaagacacaccagtta
attcacacaggagagaagccatatcactgctctcaatgtgggaagagtttcagtcatcca
aaagacttaaagtcacaccagagaactcacacaggagagaagccattccactgctcccaa
tgtggaaagagtttcagtcagttatcaactctgaaaaaacaccagctaactcacacagga
gagaagccttaccactgctctcaatgtgggaagcgtttcaccaggttatatcaactgaag
gcacaccaaataacgcacacagaagagaaaccttaccactgctctcaatgtggtgatagt
ttcaccagttcatatttcctaaagaaacaccagctaattcacacgggagaaaagccattc
cactgctcccagtgtgggaagaatttcagtcattcatcaactttgaagacacatcagata
actcacacaggagagaagcctcaccgctgctctcagtgtgggaagagttttggtcattca
tcaactctcaagacacatcagataactcacacaggagagaagcctcaccgctgctctcag
tgtgggaagagtttcagccagtcatcaactttgaagaaacatcagagaactcactcagga
ggaaagctgtgtcatcagagctga
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