Salmo trutta (river trout): 115178011
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Entry
115178011 CDS
T08542
Symbol
pex6
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
stru
Salmo trutta (river trout)
Pathway
stru04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115178011 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115178011 (pex6)
Membrane trafficking [BR:
stru04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
115178011 (pex6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_5
AAA_33
DUF815
RuvB_N
ABC_tran
AAA_19
TsaE
Vps4_C
RNA_helicase
nSTAND3
AAA_25
Mg_chelatase
AAA_14
NPHP3_N
AAA_2
TIP49
IstB_IS21
AAA_28
Motif
Other DBs
NCBI-GeneID:
115178011
NCBI-ProteinID:
XP_029594881
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Position
38:20404732..20412448
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AA seq
539 aa
AA seq
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MLTCLYQKNVLSSPALTSGCTILLLGPSGSGKFTSVRAACSRLHLHLVKVDCVTLCAATA
ATCEARIKSIFQRAEAHRPCILLLRNLQLLGQPRDGTEEDARVMAALRNGYLCNLRHCPL
FLSLSVVVVAAVSKPRELSSDVMAAFIHQVSIERPSEEQRWAMLASLSGSLPLGRDVNLA
RLAKHTAGFLLGDLSTLLTNAGXAAHRRILQSCFPEGASVQEEEDLCACEVTILVQDFTN
ALETLQDAHSQAIGAPKISSVCWQDVGGLQQVKREILDTVQLPLERPELLSLGLRRAGLL
LYGPPGMGKTLLTKAVATECSMTFLSVKGPELINMYVGQSEENVREVFSKARAAAPCIIF
FDELDSLAPNRGRSGDXGGVMDRVVSQLLAELDGLHSSRDVFLIGTTNRPDLLDQSLLRP
GRFDKLVYVGINEDKESQLQVLKAIVRKFKVDPSVSLQDVVERCPPHLTGADMYALCSDA
MMSAIKRKIARVTDDLDTEDTPLMLSAEDFNQALDCLKPSVSEQELLKYKLIQQKLTAK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgctcacttgtctgtatcaaaaaaatgttttaagctctcctgctctgacgagcggatgc
accatcctcctcctgggacctagtggcagtggcaaattcacctctgtcagagctgcgtgc
agtcgactccatctacacctagtgaaggtggactgtgtgaccctctgcgccgccacggcc
gccacctgcgaggccaggattaagtcaatcttccagcgagctgaggcccaccggccgtgc
atcctgctgctcaggaacctgcagctgctgggccagcccagggatgggaccgaggaggat
gccagggtcatggccgcgctacggaacggctacctctgtaacctccgtcactgtcctctc
tttctctctcttagcgtggtcgtggtggcggcggtgagtaaaccccgggagctgtcatcc
gacgtgatggcagcctttatccaccaggtttcgatagagagacccagtgaggagcagcgc
tgggccatgctggccagccttagcgggagcctgcccctggggagggacgttaacctggcc
aggctggcaaagcacactgcgggctttctcttgggggacctcagtacactgctgactaat
gctggttaagccgcccacagaaggatactccaatcctgtttcccagagggggccagtgtg
caggaggaagaggacctctgtgcctgtgaggtaaccatcctggtccaggacttcaccaat
gccttggagaccctccaagacgcccactctcaggccatcggagctccaaaaatctccagt
gtgtgctggcaggacgttggtggcctgcagcaggtgaagcgggagatcctggacacagtg
caattgcccctggagaggcccgagctgctgtccctaggcctgcgccgtgccggcctgctc
ctctacgggccccccggcatgggcaagaccctgctgaccaaggccgtggctaccgagtgc
tccatgaccttcctcagtgtcaaaggcccggaactcatcaacatgtacgtgggtcaaagc
gaggagaatgtgagagaggtgttctccaaagctcgagcggcggccccctgtatcatcttc
tttgatgagctggactctctagcacccaacagagggcgcagtggagacnntggtggcgtc
atggacagggtggtctctcagctcctggctgagcttgacggacttcactcctctagggat
gtgtttttgattgggaccaccaaccggccagacctgcttgatcaatcattgctcagacct
ggcaggtttgacaaattggtgtatgttgggatcaatgaagacaaagagtctcagctgcaa
gttctgaaggccatagtcagaaagttcaaggtggaccccagcgtcagtctccaggatgta
gtggaacgctgccctcctcatctcacaggggcggacatgtatgctctctgctccgacgcc
atgatgtctgccattaagaggaagattgcacgtgtcactgacgatctggacacagaggat
actcctcttatgctctctgccgaagacttcaaccaagcattggattgcctcaaaccgtcc
gtctctgaacaagagctgctcaaatataaactcattcagcagaaactcactgcaaaataa
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