Salmo trutta (river trout): 115178016
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Entry
115178016 CDS
T08542
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115178016
Peptidases and inhibitors [BR:
stru01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
115178016
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
DUF1194
Motif
Other DBs
NCBI-GeneID:
115178016
NCBI-ProteinID:
XP_029594888
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Position
3:52120630..52133402
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AA seq
1192 aa
AA seq
DB search
MLRKDSMGKGVALFLLLLALLHEAIGQKRRKGKYSVLRDGANDMTTCSMEVAFILDSSES
AKTFLFEKQKSFVLHFSTRLTMLQLSGWTLKLRMAALQYSSSVSVEHSFTAWQDLDVFHS
RVSSMAYIGHGTYSTYAITNATQLFTQETKEDSVRVAVLMTDGADHPRNPDVIGAAADAK
GSGVKLFAVGLSDLARQSQNSAKLRAIASTPTKQFVHSLTDPQLEEKLLKELGAIALEAC
PQAKVCLCERGERGPPGNSGQKGDPGYEGPSGPKGSRGEPGVSGRPGSDGLEGSPGYKGD
KGQIGDCGTPGEKGDEGPGGPPGPRGPRGDQGVNGPHGDQGPEGQTGPKGDQGTTGASGP
AGDIGIGFPGPKGAKGIQGRPGTPGPIGIGEPGQPGPPGLAGAQGNQGAVGEGLPGPKGD
RGYEGPRGERGLTGVGVKGDKGNPGQLGSQGPVGMPGAGIQGEKGNQGPVGPPGPRGNPG
VGLMGQKGSQGFSGEPGIPGESGVGEPGPKGEPGSEGLPGIPGLSGEDGDIGQKGDIGLH
GPRGPDGAPGKGVPGEKGDRGERGSRGQLGAVGPVGPMGAKGETGSAGRAGTNGPPGRGL
PGIKGDPGAVGPPGHVGEPGIGITGPKGERGLPGPIGPPGLKGEGLPGTPGAPGVPGLTG
EIGPEGKGLPGPKGDRGTPGPTGLAGAPGVGLMGPKGSAGQIGAPGPQGLPGEGIQGPKG
DSGFQGITGPRGPPGQGIQGDKGDRGFVGERGRKGDSGETGETGAPGPLGRLGEKGEAGL
TREEVIKLVRSICGCGVKCRESPLELVFVIDSSESVGPDNFNVVKDFVNALVDRASVSRE
TTRVGVVLYSHINMVVVSLHQQASRDQVKKAVRTMTYLGEGTFTGSAIHQANQVFRAARL
GVRKVAIVITDGQADERDSVRLEEAVKEANGSNIETFVIGVVNQSDPLYEEFKKELHLMA
SDPDKEHVYLIDDFRTLPALESKLLSRICESDGGAQFSSIPSSRYSPGTPGQAGIVRETP
ERTDTDTPTFNGDFTKTQMVPGPPGESDRVFIPQGPQIGDRDNSETYRVPSFDREPFKRL
PEFLLPSEMKNPSHSVVTTGSQAPTQRPHPVVKLPGLPATSPPTSPPLSQDALIPDERCG
QILDPGPCRDYFVKWYYDTTANACAQFWFGGCQGNQNRFESEKSCKNTCVKV
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaaaggacagcatggggaaaggagtggctctgttccttctactgttggcactt
cttcacgaggccataggccagaaaagaagaaaaggaaagtatagtgtcctcagagatgga
gcaaatgacatgacaacatgctccatggaggtggccttcattctggacagttcggagagc
gccaagaccttcctgttcgagaagcagaagtcctttgttctgcatttcagcactcgtctc
accatgctccagttgtctggatggaccctaaagctccggatggctgctctccagtacagc
agctccgtgtctgtagagcacagcttcactgcctggcaggacctggatgtgttccacagc
agagtcagctccatggcctacattggccatggtacctactccacctacgccatcaccaac
gccacacagctcttcacccaggagaccaaggaggacagcgtcagggtggcggtgctcatg
accgacggtgccgatcatccgaggaaccctgatgtgatcggagcagcggcggatgctaag
ggtagtggcgtgaagctttttgctgtagggttgtcggacctggcccgccagagccagaac
agtgccaaactccgggctatcgccagcacaccgaccaagcaattcgtccacagtctcact
gacccccagctagaggagaagttactgaaagagttgggtgcaatagcgcttgaggcgtgt
ccacaggctaaagtgtgtttgtgtgaaagaggggagagaggccctcctggaaactcaggt
caaaaaggagatccaggatatgaaggaccgtctggtccaaaaggatcaaggggagaaccg
ggagtcagtggtcgaccaggaagtgacggtcttgagggcagtcctggttataaaggtgac
aaggggcagataggagactgtggcacccctggggaaaaaggagatgaaggccctggagga
cctcctggcccacggggacccagaggagaccagggtgttaacggaccacacggggaccag
ggtccggagggccaaacaggacctaaaggggaccaaggaaccaccggtgcatctggacca
gcaggtgacattggcattgggttcccaggtccaaagggggccaaaggaattcagggaaga
ccaggaacccctggtcccattggaattggagagccaggacagccaggacccccaggactt
gctggagctcagggtaaccagggagctgttggggaggggctccctggcccaaagggggat
cgaggctacgagggccccagaggtgagcgtggtctcactggtgttggggtcaaaggtgat
aagggaaatcctggacagcttggatcacaaggaccggtgggaatgccaggggcaggaatt
caaggagaaaaggggaaccaagggccagttggccctccaggccccagagggaatccaggt
gtgggacttatgggccaaaagggaagccaaggcttctcaggtgagcctggaatcccaggg
gagagcggtgttggggagccaggacctaaaggagaaccaggatcggaggggttacctggt
attccgggcctctctggagaggatggagacataggacagaagggtgacattgggttacat
gggcccaggggacctgatggggcacccggaaaaggtgtccctggagaaaagggggaccga
ggggagcggggctccaggggccagctaggggcagtagggcctgtggggccaatgggggcc
aagggtgaaaccggaagtgcgggacgagcaggtacaaatggaccacctgggcgggggtta
cccggaatcaagggggaccctggtgcagtaggcccacccggacatgttggtgaaccagga
ataggaatcactggaccgaagggtgagagagggctaccagggcccattggtccacctggg
cttaaaggggaaggccttcctggaaccccaggagcccctggagtaccaggactgacaggt
gagattggaccagaaggaaaaggtttacctggtcctaagggagaccggggaactccaggc
cccacaggactagctggagcaccaggagttgggctaatgggtcccaaggggtcagctggt
cagattggagcaccgggtccccagggactgcctggagagggcattcaaggaccaaagggg
gactcaggattccaggggatcacgggccccagggggcccccaggacagggtattcaaggg
gataagggagacagggggtttgtgggcgaacgaggcagaaagggggacagtggagagact
ggagagacaggagctcctggacctttgggcagactgggagaaaaaggggaagctggccta
acaagagaggaggtcatcaaactggtcagatctatatgtggttgtggggtgaagtgccgt
gagagcccactggagttggtctttgtgattgacagctcagagagtgtgggccctgacaac
ttcaacgtggttaaggacttcgtgaacgctctggtcgaccgtgcctccgtgagccgggag
accactcgcgtcggggtggtcctctacagccacatcaacatggtggtggtcagtctgcac
cagcaagccagccgggaccaggtgaagaaggcggttcgcactatgacctacctgggcgaa
ggcacctttacgggcagcgccatccatcaggccaaccaggtgttccgggcggccaggctc
ggggtgaggaaagtggccatagtgatcacagatggacaggcggacgagagggactctgtg
aggctggaggaggcagtgaaagaggccaatggcagtaacattgagacgtttgtcatcggg
gtggtgaaccagagtgatccactgtacgaggagtttaagaaagagctccacctcatggcc
tctgacccagacaaggaacacgtctacctgattgatgacttcaggacacttcctgccctt
gagagcaagctgctgagtcggatctgtgagagtgatggcggggcccaattcagctccatc
cctagctccagatactctcccggaacccctggacaagccgggattgtcagggaaacccca
gagaggactgatactgacacgcccactttcaatggagactttacaaaaacacagatggtg
ccaggtccaccaggagagtcagacagagtctttatcccacagggcccccagatcggggac
cgagataactcggagacctacagggtaccatcctttgacagggaacccttcaagcgccta
ccagagttccttcttccgtcagagatgaagaacccctcccacagtgtggtcacgacgggc
tcccaggcccccacccagaggccccatcccgtagtaaagctacccgggctccccgcaacc
tctcccccaacctctccacctctgtcccaggatgctttaataccagatgagagatgtgga
cagattctggaccccgggccttgcagggattactttgtgaagtggtactatgacactacg
gctaatgcctgtgcccagttctggttcggaggctgtcagggaaaccaaaaccgatttgag
tcggagaagagctgcaaaaacacctgtgttaaggtctaa
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