Salmo trutta (river trout): 115178059
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Entry
115178059 CDS
T08542
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115178059
Membrane trafficking [BR:
stru04131
]
Protein recycling
Others
Others
115178059
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
115178059
NCBI-ProteinID:
XP_029594945
Ensembl:
ENSSTUG00000042977
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Position
38:complement(10508324..10675382)
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AA seq
1288 aa
AA seq
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MERGVRLCPIWHTSVFWFLLLIILSFFLAAKSEITCRSCQPGDKGRIKELLLKTDTREFA
TGYGEEVIGNGDGTTASRSLNSASAETQQLDCAAGSDECIQGKYIYSRRKRNTDMLLRSK
NALLDGGMHYGGGKQRKFTPRGEYKVSNLKMNRHAGNTDVGKARAYLIPGISHKHGVRRD
SPRANIGDDKVKSSGSPQRRETLPLSYSREGITSPAGRSRVTRSELRWSNEDRRAASSRQ
DELKLTSSTFALTGDSSHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGT
TYQKLNEKVGAKTILSYLYVSPNNKRKIMLLTDLEVESSLLISSDEGATYQKYRLSFYIL
SLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKTGLDKEPGLIHLE
TIISEGQALYVTCKLQNCTEANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPIYYVSAK
REVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSETGGVFYTLALENV
VSSMGHEGNVMIDLYEVAGIKGMFLANKKMDNVVKTYITYNRGRDWRLLQAPAADLRGNS
IRCELPYCSLHLHLHVSANPYTSGNIESKDSAPGIIVASGSIGAELTTSNVSMFITSDAG
NTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWMSFDEGRQWNKYSFTMSPLFVDGL
LGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEGDYQTWHLHNRGEPCIMGVK
RIYRKLKPIARCVMGKTYSVTMTSEPCDCTEADFECDYGYDRRSDGKCTPAFWFLPSSMS
RSCTTGTTFINSTGYRKVVSNNCTAGVIAEYTARRQHCPTQAPKGLHLVTSEGKLTATLG
TNVTFLVFLEEGDGARTSIMVDFGDGHALTYSNVSSIENGVKHVYKAVGIYRVTATAENS
LGSESVVLYLHVTCQLEYIHLSAPFVAVKSKEVNLTAVLWPSQVGTVTYIWWFGNNTEPI
ITLEGSVACTFSREGVNTVTVQVSAGNAILQDRKTIAVHEYFRSHLLAFSSNLDDHNPDV
AEWRLDISRVIKNSMVKATGVTPERLLVTVLPGLPTAAEFFLLPDKELTEGKPEKNSAHL
DQLSEILLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVLG
LAIFVVYKFKRKIPGLNVYAQMQNEKEQEMIQSPVSPTESTLVSPNTPRELVTSPELMDT
ELNTRPIGCIKSHAHVKFSTELPTYINI
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggggtcagattatgccctatttggcacaccagcgttttttggtttctgctt
ttgataattctatctttctttctggccgctaaatcagagataacttgcagatcatgtcag
ccgggagataaggggcgtattaaggaattactgcttaaaacggacacacgagaattcgca
acagggtacggagaggaagttattggaaatggagacgggacaactgcttcacggagttta
aattctgcaagcgccgaaactcaacagcttgattgcgcagctgggtccgatgaatgcatc
caggggaaatacatctactcaaggcgaaaacggaatactgacatgctgctccgttccaag
aacgcactactcgatggaggaatgcactacggtggtggtaaacagagaaaattcaccccg
cgcggtgagtacaaagtttccaacctgaaaatgaaccgtcatgcaggcaatacagatgtc
gggaaggctcgcgcatatttaattcccggcatctcacacaagcacggagttcgtagggac
agcccgagagctaatattggggatgataaagtgaagtcctccggctcaccccagagaagg
gagacactgcctctgagttactcgcgagagggcatcacctcaccggctgggcgcagcaga
gtgacacggtccgaattgcgatggagcaacgaggacagaagagcggccagttcgaggcag
gacgaactcaaactcaccagttcaaccttcgcattgaccggagattcctctcacaaccaa
gccatggtgcactggtctgggcaaaatagcagtgtgattctcatgctgaccaagttgttt
gacttcaacctgaacagtgtcacagagagctcattgtggaggtcaaccgactacggaacc
acttaccagaagctcaacgagaaagtgggggcgaaaacaatcctcagctacttgtacgtc
agtcccaacaacaagagaaagatcatgcttctgactgacctggaggtggaaagcagcctg
ctgatcagctccgatgagggagccacctatcagaagtaccgcctcagcttctacatcctc
agccttctcttccaccccgagcaggaggactggatccttgcctacagccatgaccagaag
ctgtacagctcggtggagtttggaaggaggtggcaacttgtccatgagagggtggccccc
aatcgattctactggtcgaaaacgggtttagacaaagaaccgggcttaattcacctggaa
accatcatctctgaaggacaggcgctgtacgtcacctgcaagctgcagaactgcaccgag
gccaataagggcaagccgtttcctggctacattgaccccaattcccttgtggtgcaagac
gagtatgtttttgtccaggtgtcaactggtgggcgtccaatctactacgtgtcagccaag
cgggaagtcttcacacccatgaagctacccaagtacaccttgcctaaggatctgcatgtg
atcagtacggatgagaaccgggtggttgcggcggtgcaggagtggaaccagaacgacacc
tacaacctgtacgtgtcagagactggaggggtcttctacaccctggccctggagaacgta
gtcagcagcatggggcacgagggcaacgtcatgatagacctgtatgaggtggcgggtata
aaagggatgttcctcgccaacaagaagatggacaacgtggtgaagacttatatcacctac
aacagagggagagactggaggctactgcaggctcccgctgctgacctgagggggaacagc
atccgctgtgaactaccatactgttccctacacctccacctacatgtgtcggccaaccct
tacacatcggggaatatcgagagcaaggactctgccccggggatcattgtggcctcaggc
tccatcggagcggagttgaccaccagcaacgtgagcatgttcatcacctcggacgccggc
aacacatggagacagatctttgatgaggagtacagtgttctctacctggaccaaggaggg
gccctggtggctataagacacactccactccccatccgacacctatggatgagtttcgac
gaggggagacagtggaataaatacagtttcaccatgtcgcccctgtttgtggacgggtta
ctaggggagccgggggaggagactctcattatgacgatctttggacacgtcagtcaccgg
tccgagtggcagctggtcaagattgacttcaggtccatcttcaaccggagatgtacagag
ggggattaccagacatggcacctacacaatcggggcgaaccgtgcatcatgggagtgaaa
agaatctacaggaagttgaagcccatagccaggtgcgttatgggtaagacgtactcggtc
acgatgacctcggagccctgcgactgcactgaggccgactttgagtgtgactatggctac
gataggcggagtgacggcaagtgcacccccgccttttggttcctcccatcgtccatgtct
agaagctgcaccacagggactactttcatcaacagcactggctacaggaaggttgtgtcc
aataactgcacagcgggtgtgatagcagagtacacggccaggaggcagcactgtcccacc
caggcccccaaaggcctgcacctcgtcaccagtgaaggaaagctgacagctacgctgggc
accaatgtcaccttcctggtgtttcttgaagagggcgacggagccaggacgagcatcatg
gtggacttcggggacggtcacgctctgacctactccaacgtgagctccatagagaatggg
gtcaagcacgtctacaaggctgtcgggatctaccgtgtgacagctacagcagagaacagc
ctggggtcggagagcgtggtgctgtacctccacgtcacatgtcagctggagtatatccat
ctctccgctccctttgtggcggtgaagagtaaggaagtcaacctcactgctgtgctgtgg
cctagccaagtgggaacagtcacctacatctggtggttcggaaataacactgagccgata
atcaccctggaagggagcgtggcgtgcacgttctcccgggaaggcgtcaacactgtcacc
gtgcaggtgtccgctgggaacgccatcctgcaggaccggaaaaccatcgctgtccacgaa
tatttcaggtcacatctactagccttctcatctaacctggatgaccacaaccccgacgtg
gccgaatggagactggacatcagcagagtcatcaagaactccatggtcaaagccacaggg
gtgaccccggagcggctccttgtcactgtcctaccagggttgcccacggcagcagagttt
ttcctcctgccagacaaagagttaacggagggcaagccggagaagaactcagctcattta
gaccagctctctgaaatcttacttagcgccctcaaccaaaacctggtccagttcaccctt
cggcctggggtccaggtcacagtatatgctgcacatttgtctgcagcgcccctagtggac
acgagtgagaaccacagcggctcggccatgctgatgctgctgtcggttgtggttctgggt
ttggcgatatttgtcgtctacaaattcaaaaggaagatcccaggcctcaacgtctatgcg
cagatgcagaacgaaaaagaacaagaaatgatccagagtccagtaagtccgacggaaagc
accctggtgtccccgaacactccgagggagctggtgacttctccggagcttatggacaca
gagttgaacacacggcccatcggatgcatcaaatctcacgcacatgtcaagttctcaacg
gaactccccacgtacatcaacatttaa
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