Salmo trutta (river trout): 115178067
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Entry
115178067 CDS
T08542
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115178067
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115178067
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115178067
Nuclear receptors [BR:
stru03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
115178067
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115178067
NCBI-ProteinID:
XP_029594955
Ensembl:
ENSSTUG00000035391
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All DBs
Position
3:complement(52176100..52190395)
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AA seq
450 aa
AA seq
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MFDYMDFLAVGPGETLDFYTASPCMLQEPSLTACFTGLTETDWQIHRIAQSAVETQSSSS
EDLFASPLSPPPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKDMVYTCHRDN
NCIINKITRNRCQYCRLQRCFAAGMSKECVAHKGNHTRAVRNDRSKKKETPKMTIIETYE
LTAELGCVVENICRAHRETFPSLCQLGKYTTNSSSDTRIQLDLGLWDKFSELATKCIIKV
VEFAKRVPGFTGLTITDQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQIHN
AGFGPLTDQVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEILQEPLLEAL
KIYSRKRRPSMPLMFPKVLMKITDLRSISAKGAERVVTLKMEIPGSMPPLIQEMLEEMEN
LEKQKQSEEEQRADKNITPTHAPSPCPHST
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatatggattttctcgcagttggtccaggagaaacgctggacttctatact
gcaagtccttgtatgctccaggaaccatctctaaccgcatgcttcactggactaacagaa
acggattggcaaattcatcggatcgcgcaatcagctgtggaaacccagagctccagctca
gaggacctgttcgccagtcctctctcacctccgccccctcctcgcacctacaaaccctgc
ttcgtgtgccaagacaagtcttcaggctaccactatggcgtcagtgcttgtgagggctgt
aagggtttcttccgtagaagtgtccagaaggacatggtttacacgtgccaccgggacaat
aactgcatcatcaataagatcaccaggaaccgctgtcagtactgccggctacagaggtgc
ttcgccgcgggcatgtccaaggagtgtgttgcccacaagggaaatcacaccagagctgtc
aggaatgaccggagcaagaagaaggagactcccaagatgaccatcatcgagacatatgag
ctgacagcagaactgggctgtgtagtggagaatatctgtagggctcatagagagacattc
ccttccctctgccagttgggcaaatacactacaaactcaagctcagacactaggatccag
ttggacctggggttgtgggataagttcagtgagctggccaccaaatgtatcatcaaggtt
gtggagtttgccaaacgggttcctggcttcaccggcctgactataactgaccagatcacc
ctcctcaaagcggcctgtctggacattctgattctgcggatctgtacgagatacacacct
gaccaggacactatgaccttctcagacgggctgaccttgacccgtacacagatccacaac
gctggctttggcccgctcacagaccaggtgttcaccttcgccggccagcttctgcccttg
gagatggatgacacagaaagtggcctcctcagcgccatctgcctggtgtctggagaccgc
caggacctggaggagccgtctaaggtggagatcctgcaagagcccttactggaggccttg
aaaatctactcccggaaacgccggcccagcatgcccctcatgttccccaaggtcctcatg
aagataaccgacctgcgcagcatcagcgccaaaggagctgagcgtgtggtgacgttgaag
atggagatcccaggttccatgcctcctcttatccaggagatgctggaggagatggagaac
ctggagaagcagaagcagtctgaggaggagcagagagcagacaagaacatcacacccaca
cacgcaccctcaccatgtccacacagtacatag
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