Salmo trutta (river trout): 115178076
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Entry
115178076 CDS
T08542
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
stru
Salmo trutta (river trout)
Pathway
stru04020
Calcium signaling pathway
stru04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115178076
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115178076
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115178076
Ion channels [BR:
stru04040
]
Ligand-gated channels
Glutamate (ionotropic)
115178076
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
115178076
NCBI-ProteinID:
XP_029594974
Ensembl:
ENSSTUG00000040158
LinkDB
All DBs
Position
38:6618960..6741278
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AA seq
1845 aa
AA seq
DB search
MYKVLHLHSSTMLVSLLSPSPLQDRRVTSSFPPPPPEHTSSPHQHPRLALPSLSLPLSLS
LLLLSLFLLPICESARSPGRGGAGQGGGAPGGVHGTGGAGGEKGGQRGTNLIPPHYPPYY
PPVSPARPPAPPLPPKVASSLSIAVILVGNSSEVSSTYVEKEEFLHVPHPTKVQLETMND
TDPKSIINRICTLMTNTWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMA
AKDDHSMFFQFGPSIEQQASIMLKIMEEYDWYIFSIVTTYYPGYQDFVNKIRSTIENSFV
GWELEEVLLLDMSVDDGDAKIQNQMKKLQSPVYLLYCTKEEAYTIFEVANSVGLTGYGYT
WIVPSLVAGDADNVPAVFPTGLISVSYDEWDYSLEARVRDAVAVIAMATSTMMLDRGQHT
LLKSGCNETPNKKGSKQGNSNEVLKYLMNVTFEGRNLSFSEDGYQMHPKLVITLLDKQRR
WDKVGKWENSSLSMKYHVWPRFELFSDXEAREDDHLSIVTLEEAPFVIVEDVDPLSGTCM
RNTVPCRKQLKILNQTVPGQYTKRCCKGFCIDILKKIAKQVKFTYDLYLVTNGKHGKKIN
GTWNGMVGEVEQKKAHMAVGSLTINAERSEVIDFSVPFIETGISVLVSRSNGTVSPSAFL
EPFSADVWVMMFVMLLLVSAIAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWG
LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDNKF
QKPNAFSPPFRFGTVPNGSTERNIRNNYPEMHQYMTSFHQKNVDEALASLKGGKLDAFIY
DAAVLNYMAGRDEGCKLVTIGSGKVFATTGYGIAIQKDSGWKRAVDLAILMLFGDGEMEE
LEALWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFIAEHAFYWQLRFCFM
GYCTGKPGFTFSISRGIWSCIHGVQIEENKSAMDSPSATMNMNMNNTHSNILRLLRTAKD
MTAIPGVNGSPHTHGALDYGGHHRGGGESPSIYDISEHRRSLQERKAPPPPYLPEDNMFS
DYISEVERTFGNLPLKDNNLYQDHYLHHHSGPGPGLALGMSGPPPNRPSSLGSTSSLEGG
MFDCDSLGGGVAPIFTTQPRVASLTHRNTNKFDLIAGHTSASGSGQQVCQFKSNDLYGRF
SFKGGASSSGFIDRGGHDRYCMGGGGGGGGGSGGDDVSDISSHTITYGNLEGNAKRRKQY
RDSLKKRPHSAKSRREQDEIDYRRRAHHHHTVHHHFSRGPLGHRSASPPLVPSERKRGGG
GGGGGGGGNSSPYLFRDKENLREFYAEQFHSEEGSAKWEHVDMSDGPMGGRGGGVGGGSS
GSGICKSLVPVEDFLKGNKPKKSEGKSGVVGGMGLGSSGQQAHTCWEKNMSEVGGGGIAG
GDWECRNHSGGGGGGGGKSISHHGPGGTCTHGSASGGGGGGGGSASGGGGNSRPSSATCK
RCESCKKPGNLYDISEDNLIFSQMGGGGGKSVDAGGAVQSQSHAQRRKLGPGGRVLRRQH
SYDTFVDLQKGGDGGRMGGGGGGGGGGGGGGGQLLPPRSVSLKDKDRYMEGVSPYAQMFA
QYAERDRDSPSFFNRGGSERERAKGGSSFSLFRGERGEGGLHRRSVGEKDMRDRDRRMMG
GGGGGGGGGSGKGAGTYSLSKSLYPDKVTQNPFIPTFGDDQCLLHGGKPYYVKMSPQQQQ
QPPQHLLNNSRGDFRGSMGVPSYLPASATTGVMSNVTPRFPNDLCLGGGLGGPMGNHHGP
RLGGNKLLPVRDGGLGLVGQGGQRPFNGSSNGHVYEKLSSIESDV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaggtactgcatttacactcctccacgatgcttgtcagcctcctctccccctcc
ccactccaggacaggcgcgtcacctcctccttcccccctcctcctcccgaacacacctct
tcccctcatcagcaccctcggctggcccttccctccctctccctccctctctccctctct
ctcctcctcctctccctattccttctgcccatctgcgagtcggcgcggtcacctgggagg
ggtggagctggccagggcggaggagcaccaggaggtgtacacgggacgggaggagcagga
ggcgagaaaggaggccagaggggcacaaacctcatcccccctcactaccccccttactac
cccccagtatcccctgcccggccccctgcgccccccttacctcccaaagtggcctcctct
ctcagcatcgccgtcatcctggtgggcaactctagcgaggtgtcgtccacctacgtggag
aaagaggagttcctccatgtaccccaccctaccaaagtccaactggagaccatgaacgac
acggaccccaagagcatcatcaaccgcatctgcaccctgatgaccaacacctggctgcag
ggggtggtgttcggggacgacacggaccaggaggccatcgcccagatcctggacttcatc
tctgcccagacacacatccccatcctcggcatccgaggaggctcctccatggtcatggct
gccaaggacgaccactccatgttcttccagtttggcccgtccatagagcagcaggcctcc
atcatgctgaagatcatggaggaatacgactggtacatcttctccatcgtcaccacctac
taccccggataccaggactttgtcaacaaaatccggagcaccatagagaacagttttgtg
ggctgggagctagaagaagtcctcctgttggacatgtctgtggatgacggagacgctaag
atccagaaccagatgaagaagctgcagagccctgtctacctgctttactgcaccaaggag
gaggcctacaccatctttgaggtggcaaactctgtgggactgacgggatacgggtacacc
tggatcgtaccgtcgctagtggccggcgacgccgataatgtccccgccgtgtttcccaca
gggctaatttcggtgtcgtatgacgaatgggactacagtttggaggctcgggtgcgggat
gcagtggctgtcatcgccatggcaacctccaccatgatgctggaccgggggcaacacaca
ctgctcaagtctggctgcaacgaaacccctaacaagaagggctccaaacaaggcaactcc
aatgaagtgctcaagtatctgatgaacgtgacgttcgagggacgtaacctgtcgttcagt
gaggatggataccagatgcatcccaagctagtcatcaccctgctagacaagcagagacgc
tgggacaaggtgggtaagtgggagaacagctccctgtccatgaagtaccacgtgtggccc
aggttcgagctgttctccgatngggaggcccgggaggacgaccacctgtccatcgtgacg
ctggaggaggctccctttgtcatcgtggaggacgtggaccccctcagtggcacctgcatg
aggaacaccgtgccgtgcaggaaacagcttaaaatactcaaccagacagtacctggccag
tacaccaagcgctgctgtaaaggtttctgcatcgacatcctgaagaagatcgccaagcag
gtcaagttcacctatgacctctacctggtcaccaacggaaagcacggcaagaagatcaac
ggcacctggaatggaatggtcggggaggtggagcagaagaaggcccacatggccgtgggg
tcactcaccattaacgcggagaggtctgaggtcattgacttctccgtgcccttcatcgag
acggggattagtgtcctggtctcccgtagcaacggcactgtctccccctccgccttcctt
gagccgttcagtgcggacgtgtgggtgatgatgtttgtgatgctgctgctcgtgtcggcg
attgctgtgtttgtgtttgagtacttcagcccggtcggctacaaccgctgcctggcagac
ggacgagagcccggtggcccctccttcaccatcggcaaggccatctggctgctgtggggc
ctggttttcaacaactctgtccccgtccagaaccctaaaggcaccaccagtaagatcatg
gtgtcggtgtgggccttcttcgctgtcatcttcctggcctcctacactgccaacctggct
gccttcatgatccaggaggagtatgtggaccaggtgtcgggcctcagcgacaataagttc
caaaaacccaacgccttctccccgccattccgtttcggaacggtgcccaacggaagcacg
gaacggaacatccgcaacaattacccggagatgcaccagtatatgaccagcttccaccag
aagaatgtggacgaggccctggcaagcctcaagggaggtaaattggatgccttcatctac
gatgctgctgtgttgaactacatggccgggagggacgagggctgtaaactggtgaccatc
ggcagcgggaaggtgttcgccaccaccggttacggcatcgccatccagaaggactctggc
tggaagagagcagtggacctggccatcctcatgctgtttggcgatggagagatggaggag
ctggaggctctgtggctgacggggatctgccacaacgagaagaacgaggtgatgagcagc
cagctggacgtggacaacatggcaggcgtcttctacatgctgggggcggccatggctctg
tcgctcatcacctttattgccgagcacgccttctactggcaactgcgcttctgcttcatg
ggctactgcaccggcaagccaggctttaccttctccatcagcaggggcatctggagttgt
atccacggggtccagatcgaggagaacaagtcggccatggactctccatcggccaccatg
aacatgaacatgaacaacacccactccaacatcctgcgactgctccgcacagccaaggac
atgaccgccatcccgggggtcaacggctcgcctcacacgcacggcgccctggactacggt
ggccaccaccgtggcggcggcgagtcgcccagcatctacgacatctccgagcaccggcgc
agcttacaagagcgcaaggccccgccaccaccctacctgcccgaggacaacatgttcagc
gactacatcagcgaggtggagaggacttttggcaacttgcccctgaaggacaacaacctg
taccaggaccattacctgcaccaccactcaggcccgggacccgggctggctctgggtatg
tccggccccccgcctaacaggccgagtagcttaggcagtaccagttcattggagggaggg
atgtttgattgtgacagtttagggggaggggtagcgcccatattcaccacacagccccgc
gttgcctccctgactcacaggaacaccaataagtttgacctgatcgccggccacacctca
gcctcaggctccggtcagcaggtgtgtcagttcaagtcgaacgacctctacgggaggttc
tccttcaaaggcggggcgtccagttctgggtttatcgacaggggcggtcacgacaggtac
tgcatgggtggaggaggagggggtggcgggggttcggggggcgatgatgtgtcggatatc
tcctcacacaccatcacctacggcaatctggagggcaacgccaagaggcgtaaacagtac
agggacagcttgaaaaagaggcctcactcagccaaatccagacgggagcaggacgagatt
gattaccggaggcgagcccaccaccatcacaccgtccaccaccacttctcccgcgggccc
ctgggacaccgctcggcctccccacccctggtcccctctgagcggaagagaggaggaggt
ggaggaggtggaggaggagggggtaactcttcaccttacttattccgcgacaaagaaaat
ctgagggagttctatgcggagcagttccattccgaggagggctctgccaagtgggagcat
gtggatatgtccgacgggccgatgggcggtaggggaggaggagtcggtggcggtagtagt
ggtagtggcatttgtaagagcctagtgcccgtggaggatttcctgaaaggtaacaaaccc
aagaagtcagagggcaaaagtggcgtagtcggaggaatgggcttggggtcgtcagggcaa
caggcccacacgtgttgggagaagaacatgtctgaagtggggggtggaggcatagcaggg
ggtgactgggagtgtcggaatcacagtggtggtggtgggggaggaggagggaagtccatc
tctcaccatggaccagggggcacctgtacgcatgggagcgctagtggcggagggggagga
gggggtggtagcgctagtggcggagggggaaatagtcgtccaagctctgctacttgcaaa
cggtgcgagtcatgtaagaaaccaggcaacctgtatgacatcagtgaagataacctcata
tttagccagatggggggtggaggggggaagagtgttgatgcggggggtgctgttcaatca
caaagtcatgcacagcgcaggaagctagggccaggtgggcgggtgttacggaggcaacac
tcctacgacacgtttgtggatttgcagaaggggggggacggcggacgcatgggcgggggt
ggaggaggaggtgggggaggagggggaggaggggggcagctcctcccgcccagaagcgtg
agcttgaaagacaaagaccgctacatggagggcgttagcccatacgcccaaatgtttgcc
cagtacgcggagagggacagagatagtccctcctttttcaatcggggtggtagtgagcgg
gagagggcgaaaggaggctcctccttcagtttgttccgaggcgaacgaggcgaaggtggg
ttgcaccgtcggtcggtgggggagaaagacatgagggacagggatagaagaatgatggga
ggtggaggtggaggtggtgggggcggtagtggcaaaggggccgggacttactccttgtct
aaatctctctacccagataaggtgacccagaaccccttcatcccaaccttcggcgatgac
cagtgtctattacatggcggcaaaccgtactacgtcaaaatgtctccacagcaacagcaa
caaccgccacagcatctcctcaacaacagccgtggggacttccgaggctccatgggggtg
ccttcatatttgccggcgtcagccacgacgggggtcatgtccaacgtgacccccaggttc
cccaatgatctgtgtcttgggggagggttgggggggcccatggggaaccaccatggcccc
agactgggaggcaacaagctactgccggtcagggacggggggttagggttggtggggcag
ggcggccagagacccttcaatggctcgagcaacggccacgtttacgagaagctctccagc
atcgagtctgacgtctga
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