Salmo trutta (river trout): 115178078
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Entry
115178078 CDS
T08542
Name
(RefSeq) cysteine protease ATG4D-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04136
Autophagy - other
stru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115178078
04136 Autophagy - other
115178078
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115178078
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115178078
03029 Mitochondrial biogenesis [BR:
stru03029
]
115178078
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
115178078
Membrane trafficking [BR:
stru04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
115178078
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115178078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
NHS
Motif
Other DBs
NCBI-GeneID:
115178078
NCBI-ProteinID:
XP_029594975
Ensembl:
ENSSTUG00000037257
UniProt:
A0A674CMQ5
LinkDB
All DBs
Position
38:5296272..5305187
Genome browser
AA seq
525 aa
AA seq
DB search
MNSVSPSAVQYVGGVGVVGQDDTFQREETRRPQQPQLVGPGRGSSFGNRQGTDVGGGRTR
EASTAGEPDEVDKLKTKLMSAWNNVKYGWSVKSKTTFNKSSPVTVMGHSYLLNSEDEVER
FRRAFVSRLWLTYRREFPQLEGSTLTTDCGWGCMLRSGQMLLAQGLLLHLLPRDWLWPDA
QQFVDVDFEALRPRSPSRAGGVPIPSFGYSSSSRTPTTPQKTSMPGGTALNHTQKKRPES
GRDRQAEPLHRRVVAWFGDEPPAPFGVHQLVELGKSSGKKAGDWYGPSVVAHILRKAVAK
TSEVHNLAVYVAQDCTVYKKDVVHLCDQSLNQSISDPEPSGPGWKSVIILVPVRLGGDSL
NPSYIECVRNILRLECCIGIIGGKPKHSLFFIGCQDEQLLYLDPHYCQAVVDVTQDNFPL
ESFHCSSPRKMPFSRMDPSCTIGFYAKNKKDFESLCSAVCVALSSSEEKYPIFTFVEGQA
QDYGLVGHSSSHPHSDTSPGPAHMLPQGKLSRSNTIGSSDDFVFL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtctcccagtgcagttcagtatgtggggggagtaggagtggtgggtcag
gatgacaccttccagagagaggagaccaggaggccccagcagccccagctggtgggccct
ggcagaggaagtagctttgggaaccggcagggtactgatgtcggtgggggtagaaccaga
gaggcctccactgctggagagccagacgaggtggacaaactcaagaccaaactgatgtcg
gcgtggaataatgtcaaatacggctggtcggtcaagtcgaagaccacattcaacaagagc
tctccagtgactgtaatgggccactcatatctgctcaatagtgaagacgaggtggagcgc
ttcaggcgggcgttcgtgtctcggctgtggctgacctaccgtagggagttcccccagctg
gagggctccaccttgactacagactgtggctggggctgcatgctgcggagcggacagatg
ctgctggcccagggcctactgctacatctgctgccacgagactggttgtggccagacgcc
cagcagttcgtcgacgtggactttgaggctctgagaccccgctccccgtcccgcgctgga
ggcgtacccatcccctccttcggctactcctcctcctcacggacccccaccacgccccag
aagacctccatgccagggggcacggctctcaaccatacccagaagaagaggcccgagtcg
ggcagggacaggcaggctgagcccctccaccggagggttgtggcctggtttggggacgag
cccccggccccgtttggggtgcaccagctggtagaattggggaagagctcagggaagaag
gcgggggattggtacggcccctcagtggtggcacacatactacgaaaagcagttgccaag
acttctgaggttcacaacctggctgtatatgtagcgcaggactgtaccgtgtacaaaaag
gacgtggtgcatctatgtgaccagtcgttgaaccagagtatatctgatcctgagcccagt
ggtccaggctggaagtctgtcatcatactggttccagtccgactaggtggagactctctc
aacccctcctacatcgagtgtgtcaggaacattctcaggttagaatgctgtatcggaatc
atcggcggcaaacccaagcattcgttgttctttatcggctgccaagacgagcagctgctg
tatctggaccctcactactgtcaggccgtggtggatgtcactcaagacaacttcccactg
gagtcgttccactgtagctcgcccaggaagatgcccttcagtcgcatggaccccagttgt
actataggcttctacgccaaaaacaagaaggactttgagtctctgtgttccgccgtctgt
gtggccctatcgtcgtccgaagagaagtaccccatctttaccttcgtggagggccaggcc
caggactatgggctggtgggccacagctcctcccatcctcactctgacacctcccctggc
cccgcccacatgctaccccaaggcaagctcagcaggagcaacacaataggcagctctgac
gactttgtcttcctgtga
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