Salmo trutta (river trout): 115178277
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Entry
115178277 CDS
T08542
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115178277
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115178277
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
115178277
Membrane trafficking [BR:
stru04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
115178277
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
115178277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
TIP49
Vps4_C
AAA_5
Mg_chelatase
IstB_IS21
DUF815
AAA_16
AAA_14
MIT
nSTAND3
AAA_24
NPHP3_N
AAA_2
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
115178277
NCBI-ProteinID:
XP_029595243
Ensembl:
ENSSTUG00000049253
UniProt:
A0A674ETD7
LinkDB
All DBs
Position
38:complement(18182311..18217290)
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AA seq
591 aa
AA seq
DB search
MSFPGGRGSRNKRGAAGSPPDGGDICDQVSLHKRNVYYFFYPLLALFAVLRVLVLNFGVL
FAWLCERMSRAMVARPKQRAADEHANKVCKQDSGEQIRNSHKQAFEYISVALRIDEDDKV
HKEQAVQWYKRGIAELERGIAIEVTENGEKYERDKRLQAKMITNLIMAKDRLELLAKLCS
GPAQRDIYTESSNQSYHNGHLRSVTGAVPKKRDSLTTHSSHSLPRPKQTAKKTLAAGHGG
HQRSPSFSGPSSSHTQHRPAPQSNSNKGKAGCKPTTTTSMSPLKNRDMKNLKNVDSKLAN
LILSEIIDSGTSVRFEDVAGQELAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPGN
GKTMLAKAVAMESNATFFNISAASLTSKYMGEGEKLVRALFAVARELQPSIIFIDEIDSL
LCERREGEHDASRRLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLRRFAKRVYV
ALPTEETRLKLVKNLLEKHGNPLAQKELSQLARMTEGYSGSDLTSLAKDASLGPIRELRP
EQVRNMAANEVRNIRFSDFVESLKKIKRSVGPQTLDLYVRWNKDYGDTTGV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagttttccgggaggaagaggcagcagaaataagcgaggcgctgcagggtctccgccc
gacggaggggacatctgcgaccaggtgtcactacataaacgaaatgtgtactacttcttc
tacccactgctggcgttgtttgcagtgctccgtgtcctagtcttgaatttcggcgtactc
ttcgcctggctgtgcgagcggatgtctcgcgctatggttgcgagacccaaacaacgggca
gcagacgaacatgcgaacaaggtgtgcaagcaggacagcggcgagcagatcagaaacagc
cacaaacaagcattcgagtacatctcagtggctttgagaattgacgaggatgacaaagtg
cacaaggaacaggcagtccagtggtacaaacgcggaatcgcagagctcgagaggggcatc
gcgatcgaggtaactgaaaacggcgagaaatatgaacgtgataaacgtctacaggccaag
atgatcaccaatctgatcatggcaaaggatcgcctggagcttttagcaaagctgtgttca
gggccagctcagagagacatctatacagagagctcaaaccagtcataccataacgggcat
ctacgctcagtaactggagccgtacccaaaaagagggactccctgactactcactccagt
cactccctcccacgaccaaagcaaacagcaaaaaaaaccttggcggcaggccacgggggt
catcagcgctcccccagcttcagtgggccctccagcagtcacacacagcacagaccggcc
ccccagtccaacagcaacaagggtaaagcgggctgtaaacccaccaccaccacatccatg
tccccactgaagaacagggacatgaagaacttgaagaatgtggacagcaagcttgccaac
ctcatccttagtgagatcatagacagtggcacatcagtgaggttcgaggacgttgctggc
caggagctggctaaacaggccctacaggaaatagtcatcctgcctgcactgaggccagag
ttgtttacaggcttgagggctccagcacgaggccttttgctcttcggtcctcctggcaac
ggaaagacaatgctggctaaagcagtggccatggagtccaacgccacattcttcaacata
agtgcagccagcttgacctcgaaatatatgggggagggagagaagctggtgcgagctctg
tttgccgtcgccagagaactgcaaccctcgatcatcttcatagatgagattgacagtcta
ctctgtgagaggagagagggagagcatgatgccagcagacgactcaagaccgagttcttg
attgagtttgatggggtacaatctggtggggatgagcgggtgttggtgatgggagccacc
aacagacctcaggagctggacgaggctgttcttaggcgatttgcaaaacgggtgtacgtg
gctttaccaacagaagagacacggctaaaactggtcaagaaccttttggagaagcacggg
aatcctctcgcacagaaagaactgtcacagctagccagaatgacagaaggctattctggc
agtgacctgacctctctggccaaagatgcgtccctcggtcccatcagagagttgcgtcca
gaacaagtcaggaacatggccgcaaacgaggtgaggaatatcaggttctctgatttcgtg
gagtcactgaagaagatcaagaggagtgtcggaccacaaacgctggacctgtatgtgcgc
tggaacaaggactatggggacaccactggtgtatga
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