Salmo trutta (river trout): 115178294
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Entry
115178294 CDS
T08542
Name
(RefSeq) transcription factor Sox-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115178294
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115178294
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115178294
NCBI-ProteinID:
XP_029595267
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All DBs
Position
38:complement(6404928..6410100)
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AA seq
494 aa
AA seq
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MSGEEHSLSEAELSPGGSDGHSLSPAHSGATGGRDSPLTGPSQQLTGLSGADGGGEDGGL
VPKSEVDMDRFPIGIREAVSQVLDGYDWTLVPMPVRVNNGNKSKPHVKRPMNAFMVWAQA
ARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRKQHKKDYPEYKYQPRR
RKNGKLGTNGEGGEGAEGEGSHAQSHYKALHLDVHSTGAGSPLVDLHHHHHHHPAGQGHS
PPTPPTTPKTELQSGKMTEGKREGGGGSGSSRGGGLGVGAEGASGGHSSAGGKPHIDFCT
MDIGEISHDVMANIEPFDVNEFDQYLPPNGHPGVGQGGATPSSSATSYAYALAAASGHSA
AWLSKQHQHQQPSPSASDATKAQIKSESGGGSHYAESSSSSSGTHVTYTPLSLPHYGSAF
PSLPSRAQFEYGEHQAPGPYYAHSSQAPGLYSAFSYMGPSQRPLYTTITDPSSVAQSHSP
THWEQPVYTTLSRP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagaggagcacagtctatccgaggcagagttgagtcccgggggatcagatggt
cactctctgtcaccggcacactccggggccaccggcggccgggactccccgctcaccggt
ccgtcgcagcaactgacggggctttctggcgcagatggtggcggagaggacggtggacta
gtgcccaagtcagaggtggatatggaccggttccccatcggcatccgcgaggcggtcagc
caggtgctggacggatacgactggacgctcgtgcccatgcccgtgcgcgtaaacaacggg
aacaagagcaagccgcacgtgaagaggccgatgaacgccttcatggtgtgggcgcaggcc
gcgcgccgtaaactggcggaccagtaccctcacctgcacaacgcggagctcagcaagaca
ctcggcaaactgtggaggctcctgaatgagagtgacaagaggcctttcattgaggaggcg
gagcgactgaggaaacaacataagaaggactacccagagtacaagtaccagccccgcaga
cgcaagaacggcaagctggggaccaatggtgagggaggggagggagcagagggggagggc
agccacgcccagtcccattacaaggccctccacctggatgtgcacagtacaggggctggg
tcccccctggtcgacctccaccaccatcatcaccaccaccctgcaggtcagggtcacagc
ccgccaacaccccccaccaccccaaagacagagctccagtctggaaagatgacggagggg
aagagggagggcggaggtggctcagggtcttcccgtggaggaggcctgggtgtaggagca
gagggggcctctgggggacattcatcagcgggcgggaaaccccacatcgacttctgcacc
atggacatcggcgagatcagccacgacgtgatggcaaacatcgagcccttcgacgtcaac
gagtttgaccagtacctgccgcccaacgggcacccgggggtcggccagggcggcgccaca
ccaagctcctccgctacatcctacgcctacgccctcgccgccgccagcggtcactcagcc
gcctggctctccaagcagcatcagcatcaacagccctccccctctgcctcagacgccacc
aaggcccagatcaagagtgagtctggaggcgggagccactacgcagagtcttcctcctct
tcgtcaggaactcacgtcacctacacccccctcagcctcccccactacggatcagccttc
ccctcgctgccctccagggcccagtttgagtacggggagcaccaggcgccggggccgtac
tacgcccactccagccaagccccggggctgtactcagccttctcctacatggggcccagc
cagaggcccctctacactaccatcactgacccctccagcgtggcccagtctcacagtcct
acacactgggagcagcctgtctataccaccctgtcacggccatga
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