Salmo trutta (river trout): 115178335
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Entry
115178335 CDS
T08542
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115178335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115178335
03036 Chromosome and associated proteins [BR:
stru03036
]
115178335
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115178335
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115178335
PBAF complex
115178335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
HMG_WDHD1
Pcf11_helical
RMI1_C
Motif
Other DBs
NCBI-GeneID:
115178335
NCBI-ProteinID:
XP_029595332
Ensembl:
ENSSTUG00000019645
LinkDB
All DBs
Position
38:complement(13663665..13672173)
Genome browser
AA seq
429 aa
AA seq
DB search
MSKRERERPYAPPPPPAPTTQLPNTPGFVGYNPYSHLAYNNYRLGGTTSNNSRATNSSGI
NIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLN
DYEAEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAD
DPDDYDDGFSMKHTAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVH
QRKLEAELLQIEDRHQDKKRKFIDATESFNSELKRLCCMKVEVDMEKISAEVAAAEDASR
RRMSEREKEASTSSSLEEEEKPVGPSNGSKSQQVSVSDSSNKEREETEPRPMDTGEKSKA
SEESTARPASEVEEGAPLEDKESVPEGVMEDGTSDSNTGSETTSAVTEDAPPSEPAASEG
PSRARPTAH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagagaaagagaaaggccatatgcccctccccctcccccagcccctacaaca
caattgcccaacacccccgggtttgtggggtacaacccctacagccatctggcttacaac
aactacaggctgggcgggacaacaagcaacaacagtcgggcaacgaattcttcaggaata
aacattccaaagccacccaagccgccagacaagccgctgatgccgtacatgcgatatagt
cgcaaggtttgggatcaagttaaagcctccaatcccgatctgaaactatgggaaattggg
aagataatcggtggcatgtggagggacctcactgatgaggagaaacaggattacttgaat
gattacgaagcagagaagattgagtacaatgagagcatgaaggcctaccacaactctcca
gcctacctggcttacgtcaacgctaagagccgcgccgaggccgctctggaggaggaaagc
cgacagcgccagtctcgtctcgacaagggcgagccgtacatgagtatccagccagcagac
gacccagatgattacgacgacggattctccatgaagcacacggctgccgcccgtttccaa
cgcaaccaccggctgatcagcgagatcctgagcgagagcgtggtccccgacgtgcgctcc
gtcgtcactaccgcccgcatgcaggtcttgaaacggcaggtccagtctcttatggtgcac
cagaggaagctggaggcggagctacttcagattgaagaccgccaccaggacaagaaaagg
aaattcatcgatgccacagagtctttcaacagcgagctgaaaaggctgtgttgtatgaaa
gtggaggtggacatggagaagatatctgcagaggtcgccgcggcagaggatgcatcccgc
aggcgtatgtcggagcgggagaaggaggcgtccacgtcctctagcctggaggaggaggag
aaaccagttggcccgtcaaatggcagcaagagccagcaggtgtctgtcagtgacagcagc
aacaaggagagagaggagacggaacccagacccatggatactggtgagaagtcaaaggca
tcggaggagtcgacggctcgtcctgccagtgaggttgaggagggggcgccattggaggac
aaggagagtgttccggaaggggtgatggaggacggcaccagtgacagtaacacggggtcc
gagaccacctctgccgtgacggaggacgccccgcccagcgagccagcagcctcagagggg
ccgagcagggcacgccctaccgcccactga
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