Salmo trutta (river trout): 115178351
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Entry
115178351 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
stru04137
Mitophagy - animal
stru04144
Endocytosis
stru04340
Hedgehog signaling pathway
stru04350
TGF-beta signaling pathway
stru04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115178351
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115178351
04350 TGF-beta signaling pathway
115178351
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115178351
04137 Mitophagy - animal
115178351
09144 Cellular community - eukaryotes
04520 Adherens junction
115178351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115178351
04121 Ubiquitin system [BR:
stru04121
]
115178351
03029 Mitochondrial biogenesis [BR:
stru03029
]
115178351
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115178351
Membrane trafficking [BR:
stru04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115178351
Autophagy
Mitophagy
Other mitophagy associated proteins
115178351
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
HECT type E3
115178351
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115178351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
115178351
NCBI-ProteinID:
XP_029595358
Ensembl:
ENSSTUG00000027685
LinkDB
All DBs
Position
38:complement(15230722..15298284)
Genome browser
AA seq
801 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLSKKDFFLVNTILHFGSSSTGLPDPFAKVVVDGSGQC
HSTDTVRNTLDPKWNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRL
KDTGYQRLDLNKLGPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERR
TASGRIQYLNHITRTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPNGAAIGVLPSG
GSDPRVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDP
RVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPNG
PGPNSPGPNGSRVAMESQSQNTNLSSRQSNQLKEQQPPPQVPALSPAQLPEEAECMNVPK
YNRDLVQKLKILRQELSNQQPQAGHCRIDVCREEIFEESYRQVMKMRPKDLWKRLMVKFR
GEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVG
RIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDITGVLDH
TFCVEHNAYGEIIQHELKPNGKTVSVSEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNE
VIPQHLLKSFDEKELELIVCGLGKIDIADWKSNTRLKHCTTDSNVVKWFWKAVESYDEER
RARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDANTNNLPKAHTCFNRIDVPAYEH
YDKLYDKLLTAIEETCGFAVE
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttaggagaaatggcccagtgaaactgcggttgacagtgctgtgt
gcgaagaacttgtcgaagaaagacttcttccttgtgaatacaatcctccattttggctcc
tcctccacagggctgcctgacccctttgccaaagtggtggtggacggctcggggcaatgc
cactccacagacaccgtaaggaacacgctggaccccaagtggaaccaacattacgacctg
tacattgggaagtctgactccatcaccattagtgtgtggaaccacaagaagattcacaag
aagcagggggccggcttcctgggctgtgtacgccttctctccaacgccatcaaccgcctc
aaagacaccggctatcagagactggacctgaacaagctgggccccaatgacaacgacaca
gtgagaggccagatagttgtgagtctacagtccagagaccgtatcggcacaggaggcccc
gtggtggactgcagccgtctgtttgataatgatttacctgacggctgggaggagaggaga
acagcctctggtcggatccagtaccttaaccacatcacacgcaccacgcaatgggagagg
cccacccggccggcgtctgagtactccagcccctccgggcggcccctcagctgcgtggtg
gatgagaacacgccggtcatgacacccaacggggcagccatcggtgtgctgcccagcggt
ggcagtgacccgcgggtccaggagagacgcgtccgctcccagagacacaggaactacatg
agcaggacccacctccacaccccgccggacctgccagagggatacgagcagagaaccacg
cagcagggccaggtgtacttcctccacacccagacgggcgtcagcacatggcacgacccc
cgagtgcccagggatctgagcaacgtcaactgtgaggagctgggtcctctgccgccgggc
tgggagatccgcaacacggcaacggggcgcgtctactttgtggaccacaacaaccgaacc
acgcagttcaccgacccgcgcctctccgccaacctccacctggtcctcaatccaaacggc
cctggtccaaacagccctggtccaaacggttcccgcgtggccatggagagccagagccag
aacactaacctcagtagtcgtcagtcgaaccagttgaaggagcagcagccccccccgcag
gtcccggcgttgtccccggcccagctccccgaggaggccgagtgcatgaacgtgcccaag
tacaacagggacctggtccagaagctcaagatcctccggcaggagctgtccaatcagcag
ccccaggcaggacactgtcgcatcgacgtctgccgcgaggagatctttgaggagtcgtac
cgccaggtgatgaagatgcgtcccaaggacctgtggaagagactaatggtcaagttcaga
ggagaggagggcctggactacggaggagtggccagggagtggctgtacctgctgtcccat
gagatgttgaacccctactacggcctgttccagtactccagagacgacatctacaccctg
cagatcaacccagacagcgccgtcaacccggagcacctgtcctacttccactttgtgggt
cgtatcatgggcatggcggtgttccacggccactacatagacgggggcttcaccctgccc
ttctacaaacagctgctggggaaacccatcaccctggacgacatggagtcagtggaccca
gacctccacaacagcctggtctggatcctggacaatgacatcacgggggtgctggaccat
acgttctgtgtggagcacaatgcctacggcgagatcatccagcatgaactgaagcccaac
ggcaagactgtctctgtctccgaggacaccaagaaggagtatgtcaggctgtatgtgaac
tggcgtttcctccacggcatcgaggctcagttcctggccctgcagaagggcttcaacgag
gtcatcccccagcacctgctcaagtcctttgacgagaaggaactagagttgatagtgtgt
ggcctggggaagatcgacatagcggactggaagagcaacacgcgcctgaagcactgcacc
acggacagcaacgtggtcaagtggttctggaaggccgtggagtcctacgacgaggagagg
agagccagactgctgcagtttgttaccgggtcatctagagtcccactgcagggattcaag
gctttacaaggtgccgcggggcccaggctcttcaccatccaccagatcgatgccaacacc
aacaatctacccaaagcccacacctgctttaaccggattgacgttcccgcctacgagcac
tatgacaagctgtacgacaagctgctgacagccatcgaggagacgtgtggctttgcggtg
gaatga
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