Salmo trutta (river trout): 115178391
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Entry
115178391 CDS
T08542
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115178391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115178391
03016 Transfer RNA biogenesis [BR:
stru03016
]
115178391
03012 Translation factors [BR:
stru03012
]
115178391
04131 Membrane trafficking [BR:
stru04131
]
115178391
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115178391
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115178391
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115178391
Translation factors [BR:
stru03012
]
Eukaryotic type
Elongation factors
115178391
Membrane trafficking [BR:
stru04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
115178391
Exosome [BR:
stru04147
]
Exosomal proteins
Proteins found in most exosomes
115178391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
115178391
NCBI-ProteinID:
XP_029595422
LinkDB
All DBs
Position
38:complement(8679232..8686032)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEASPNMTWFKGWKVTRKDGNASGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAANFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKAVEKKAPSTGKVTKSAQKAQKVK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggagaagcttcacatcaacatcgtggtgatcggccatgtggactcaggcaag
tccaccacaacaggccacctcatttacaagtgtgggggcatcgacaagaggaccattgag
aagtttgagaaggaggccgctgagatggggaagggctcgttcaagtatgcctgggtgctg
gataagctgaaggcagagagggagcgaggcatcaccatcgacatctccctgtggaagttt
gagaccagcaggtactacgtcaccatcatcgacgccccgggacacagggacttcatcaag
aacatgatcactggcacctctcaggcggactgtgccgtgctcatcgtggcggcgggcgtg
ggcgagttcgaggcgggcatctccaagaatgggcaaacccgcgagcacgcccttctggcc
tacaccctaggggtcaagcagttgattgtaggggtcaacaagatggactccaccgagccc
aactacagccagaaacgctatgaggagattgtgaaggaagtcagcacctacattaagaag
attggttacaacccggatacggtggccttcgttcccatctctggctggaatggggacaat
atgctggaggctagccctaacatgacatggttcaaagggtggaaggtcacccgtaaggac
ggcaacgcctctggaaccaccctgctggaggccctggacgccatccagccgccctctcgc
cccacagacaaacccctccgcctgcccctacaggacgtttacaagataggaggtattggt
acggtcccggtggggcgggtggagacgggcgtgatcaagccaggcatggtggtgactttt
gcccccgtcaatgtgaccacggaggtcaagtcagtggagatgcatcacgaggcgctgacc
gaggccatgcccggagacaacgtgggctttaacgtcaagaacgtgtcggtaaaagacata
cggcgagggaacgtggctggagacagtaagaacgacccgccgatggaggcggccaacttc
actgcacaggtcatcatcctgaaccacccaggtcagatcagtgccggctacgcccctgtg
ctggactgccacacggcccacatcgcctgtaagttcgctgagctgaaggagaagattgac
cggcgctcgggcaagaagctggaggacaaccccaaggccctgaagtctggcgacgcagcc
atcgttgacatggtccccgggaagcccatgtgtgtggagagcttctctgagtacccacca
cttgggcgctttgcggtgcgtgacatgcgtcagacggtggcggtgggcgtgatcaaggcg
gtggagaagaaggctccgtccacgggcaaggtcaccaagtcggcccagaaggcccagaag
gtcaaatga
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