Salmo trutta (river trout): 115178447
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Entry
115178447 CDS
T08542
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115178447
09122 Translation
03013 Nucleocytoplasmic transport
115178447
03015 mRNA surveillance pathway
115178447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115178447
03041 Spliceosome [BR:
stru03041
]
115178447
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115178447
Spliceosome [BR:
stru03041
]
Complex C
Other components
EJC/TREX
115178447
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
115178447
NCBI-ProteinID:
XP_029595493
LinkDB
All DBs
Position
3:53147148..53150938
Genome browser
AA seq
196 aa
AA seq
DB search
MDTSRISSTFTRISAKTGANNMADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRG
FGSEEGARSRVREDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEI
KNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKSKR
RGGGRRRSRSPDRRRR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggatacttcccggatatcatcaacattcacgcgcatcagcgcaaaaacaggagctaac
aacatggctgacgtactagatcttcatgaagcgggaggcgaggactttgctatggatgag
gatggtgatgacagcatccacaagttaaaagagaaggcaaagaggagaaagggacgaggt
tttggttcagaggagggagcgaggtccagagtgagagaggactatgataccgtggagcag
gatggagacgagccaggtcctcagagatctgtggagggttggatccttttcgtgactggg
gtacatgaagaggccactgaggaggacatccacgacaagtttgcagagtttggagagatc
aagaacctacacctgaacctggaccgaagaacaggttacctcaagggttatgcgctggtg
gagtatgagacgtacaaagaggcccaggcagccatggaagggttgaatggccaggacatg
atgggccagcccatcagtgtggactggggctttgtcagaggaccacccaagagcaagagg
aggggtggtggacgtagacgcagcaggagtccagacaggagacgacgttga
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