Salmo trutta (river trout): 115178560
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Entry
115178560 CDS
T08542
Name
(RefSeq) ubiquilin-4-like
KO
K04523
ubiquilin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115178560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115178560
03051 Proteasome [BR:
stru03051
]
115178560
Membrane trafficking [BR:
stru04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115178560
Proteasome [BR:
stru03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
115178560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
Rad60-SLD
UBA
Ubiquitin_5
UBA_7
YukD
Rad60-SLD_2
Dsc3_N
UBA_HOIP
CUE
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
115178560
NCBI-ProteinID:
XP_029595680
Ensembl:
ENSSTUG00000038189
UniProt:
A0A674CV75
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All DBs
Position
3:53566954..53573146
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AA seq
592 aa
AA seq
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MAENSGTDPTVDSNVVENAASDGTMIVVTVKTPKDKEEIAISEDSSVAQFKEEISKRFNA
KQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTAPKATVGGTSQSSASSSGTPQAN
SSINPSAVPNASTTPGTGPTPASTQPPNLLSGFGDLSSLSGMGMGSANFMEMQQQMQRQL
MSNPEMLSQIMDNPLVQNMMSNPDLMRQMIVTNPQMQQLMERNPEISHMLNNPELMRQTM
ELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSAL
GGNLDSGVQPSRTENREPLPNPWGPPGTTPSESRGTGASTTTTSSAGGTAPSASNPLGIN
ASGLGNGVFGSPGMQSLMQQISENPQLMQNMLSAPYMRSMMQSLAQNPDLASQAMLNNPL
FAGNPQLQEQLRHQMPVFLQQMQNPESLSVMTNPRAMQALMQIQQGLQTLQTEAPGLMPS
LAPGEIPVIPPTTGGSVAPENLPPPTQGSNPTAATNPSQQQQQLMQQMLQMFAGGGGVSS
TQTVTPEVRFQQQLDQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaacagcggcacagatcccactgtggattccaacgttgttgaaaatgctgcc
tcagacgggaccatgatcgtggtcacggtaaaaactccgaaagataaagaggagatcgcg
atctcggaggattcttctgtagcacagtttaaagaggagatatccaaaaggtttaatgcc
aagcaggaccagctggtgttgatttttgctggcaaaatcttaaaggatggggacacactg
aaccaacacggcatcaaggacggactcactgttcaccttgtcatcaagactgcgcccaag
gccacagttggtggcacatcccagtcctctgcatccagctctgggaccccccaggccaac
agcagcatcaaccccagcgcagtgcccaatgccagcacaacaccaggcactgggcctacc
ccagcctccacacagccacccaacttactgagtgggtttggtgacctatctagcctgtca
ggcatgggcatgggctcagccaacttcatggagatgcagcagcagatgcagagacagctg
atgtccaacccggagatgctgtctcagatcatggacaaccctctggtgcagaacatgatg
tccaacccagacctgatgaggcagatgattgtgaccaaccctcagatgcagcagctgatg
gagcgcaaccctgagatctcccacatgctcaacaaccctgaacttatgagacagaccatg
gagttggcaaggaacccagccatgatgcaagagatgatgcgtaaccaggaccgggcgctt
agcaacctggagagcatccctgggggatacaacgccctccggaggatgtacacagacatc
caggagcctatgttcagtgccgctagagagcagtttggaaacaatcccttctctgctttg
gggggcaacttagactctggcgtgcagccctccagaacagagaacagggaacccttacca
aacccctggggaccccctggaacaaccccctcagagagcagggggactggcgcctccacg
acaacaacctcctccgctggcgggactgcacccagtgcctccaaccccctgggcatcaac
gcctctgggctgggcaatggtgtgttcggtagccctggcatgcagagtctgatgcagcag
atctctgagaacccccagctgatgcagaacatgctgtctgcgccctacatgcgcagtatg
atgcagtcgctggcgcagaaccctgacctcgcctcgcaggcaatgctgaacaaccccctt
tttgccggaaacccccagttacaggaacagttgagacatcagatgccggtctttctccaa
cagatgcagaatcctgagtcactgtccgtgatgactaacccccgggccatgcaggctctc
atgcagattcagcagggcctgcagaccctacagacggaagcccccgggctcatgcccagt
ttggctcctggtgagatcccagtgattcctccaaccacaggaggcagtgtggccccagaa
aaccttcctcccccaacacagggctcaaatcccaccgctgccactaacccatcccagcaa
cagcagcagctcatgcagcagatgttacagatgtttgctgggggaggaggcgtctcatcg
acccagaccgtaaccccggaggtgcggtttcagcagcagctggaccagctcagcgccatg
ggcttcatcaaccgcgaggccaacctgcaggccctcatcgctacggggggagacatcaat
gctgccattgagagactgctgggctcccagccctcctaa
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