Salmo trutta (river trout): 115178704
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Entry
115178704 CDS
T08542
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115178704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115178704
03036 Chromosome and associated proteins [BR:
stru03036
]
115178704
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115178704
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115178704
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
115178704
NCBI-ProteinID:
XP_029595837
LinkDB
All DBs
Position
38:12918622..12930767
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AA seq
1136 aa
AA seq
DB search
MFSPRPTPSSGRRQSSRVTGRKSLAGTPTGLLFSPRRTSLAARSTPTRVQSYSTSEALHF
DVQTFGSSLPVKVMEALTMADADDQISVKVDESGWAWMVCGERLIIWKICQTAVAKLSVC
KGLQLPASEFAYYADLISISSPSPLETATVQSISVMAVAPEGTARFWPSLAHEGNYTETV
VDMGENLCNFVVAVRGGSFIVSSYKGQMMRLGADPSGKLLQRALQQGQGVLSGIGRRVSS
LFGMLAPLTNNNLHSVLWVGETGCLYTLTSCGLSKWEMDEVTEHQVLSWDSSRALTESVA
DAIWGSESNYEEIKEGVNVTYMDMQLSQDGLVVLAAAWHPSDSPCLAYFCLVTLLDNGNN
ISEELSVEVTKYNPPFQSEDALQAMRLMLPRASSPAAFLYNEELVFACSTGTGRGGLPEE
KIPFNTPGDRLCGGGCCANLPVFFSQNSGLVAVVARERASMLPETMEDSLCFSLAGAGPE
ATAMETPTRVEPVAQEDKTKLLKAAFLQFCRNDLVGAQTMTDELFPPDGDGDGELDLVVT
RINLDLVDDYPASDPRWAESVPDESAGFPLTSLIILHQLEDKMKAHGCFMDFLLQVGLLD
RLGQTAVRSSPMATRLLLCEHAEKLQAAMTLKNHHAKHGELVNRAILSALRKSNAAVSTS
LTAADVFFREVSQISSVFECLLEEEERTLKENPVDSVKWAEVVLSVNTIIKDMLQAAGQY
RDTKASLYRASESTPAESEYIPWTASSGLGGVRTVIARQHEVILRDVYPHADSELRNGLN
EQLAALLDVLLGGYVSQLTSLRPGRPGQQDRYNTLEMEYTQRRSELLAPLLELGQYQWVA
ALAEKYCDFDILVQMCEQTDNQNRLQHYMAKFADQNFADFLFRWYMQKGKRGKLLSQPIA
QHQQLASFLQSHEHLSWLHHIHVHDFSSAYKTLYGQANMETRYFVKKKTLLALSKLTALA
SDMPEAVMKKQVDDMVEQERFLLHQETLPKQLLEEKQQNPDTMPLLSAHNLIRLYICDDN
RRANEYDFKKALDLLEYIDEEDAVDIEGLKCEIFCKALKKDDWLSADGNDDPLEAAKDSI
FVKILLKLIQEGVPLQTYLPDVKDLLQLDEMEALTSKPTFEFVLRANYEHYLQAQI
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcccacgtcccacccctagttcaggccgcaggcagtcctcaagggtcaccggt
agaaagagtctcgccggtacacctacagggcttctcttttccccacgtaggacgtcgtta
gcagcgagatcaactcccacgcgtgtgcagagctactcaacttcagaagcactccacttc
gatgtccagacgtttggctcttctctacctgtcaaagtcatggaggctttgacaatggct
gatgccgatgaccagatctctgtgaaggtggatgagagtggctgggcctggatggtgtgt
ggagagagactgatcatctggaagatctgccagactgctgttgcaaagttgtcagtatgt
aagggcctccagctgcccgctagtgagtttgcctactatgctgatctcatctccatatca
tctcccagccctctggagactgccactgttcagtctatctctgtcatggcggtggctcca
gagggaacagcccggttctggcccagtttggcccacgaggggaattacactgagactgtg
gtcgacatgggcgaaaacctctgcaactttgttgttgctgttagggggggtagtttcatc
gtgtcatcctataagggccagatgatgcgtctcggggcggacccctccggaaagctgctg
cagagggcgctacagcagggccagggggtgctttccggcatcggacgccgcgtctccagc
ctgtttggcatgctcgccccgctcaccaacaacaatctccacagtgttctgtgggtggga
gagacgggctgcctgtatactctgacctcctgtgggctcagtaaatgggagatggatgag
gtcacagagcaccaggtcctcagctgggactccagccgcgctctgacggagagtgtagcc
gacgccatctgggggtcagagagcaactatgaggaaatcaaggaaggagtgaacgttacc
tacatggacatgcaactgagccaggatggcctggtagtgttggcggcagcctggcacccc
tcagactccccctgcctggcctacttctgcctggtcaccctgctggacaacggcaacaac
atctctgaggagctctctgtggaggtcaccaagtacaacccccccttccagagtgaggat
gctctccaggccatgaggctgatgttaccacgggcctccagccctgctgccttcctgtac
aacgaggagctggtgtttgcctgctccaccggtaccggcagaggaggtctacctgaggag
aagattcccttcaacacacctggtgaccgtctgtgtggtgggggctgctgtgccaacctg
ccagtgttcttctcccagaacagtggtctggtggccgtggtggccagagagagggcctct
atgctgcctgagaccatggaggactccctctgcttctccctggctggggccggccctgag
gcaactgctatggagactccgactagggtggagcctgtagcgcaagaggacaaaaccaaa
ctcctaaaagcagcgttcctgcagttctgccggaatgacctggtgggggcccagaccatg
acagacgagctgttccccccagatggggacggagacggggagctggacttggtggtgacc
cggatcaacctggacctggtggatgactacccagcgtcagacccccgctgggccgagtct
gtccctgacgagagtgctggcttccccctgacctccctcatcatcctccaccagctagag
gacaagatgaaggcccacggctgcttcatggacttcctgttacaggtgggtctcctggac
cggctgggccagaccgcggtgcgctcgtctcccatggcgacgcgcctgttgctgtgcgag
cacgccgagaagctacaggcggccatgacgctgaagaaccaccacgccaagcacggcgag
ctggtcaatcgtgccatcctcagtgccttgaggaagagcaacgcagccgtgtccaccagc
ctcacggccgccgacgtcttcttcagagaggtgtctcagatctcctcagtctttgagtgt
ctcctagaagaggaggagaggactctgaaggagaaccctgtggactctgtgaagtgggct
gaagtggtgctcagtgtcaacaccatcatcaaggacatgctgcaggctgctggtcagtac
agagacaccaaggcctcactgtacagagcctcagagagcacccctgctgagtcagaatac
atcccatggaccgcctctagcggtctgggaggggtgcgcaccgtcatcgcccgccagcac
gaggtgatcctgcgtgacgtgtaccctcacgccgactcagagctgcgcaatggcctgaac
gagcagctggcagccctgctggacgtgctcctgggaggctacgtttcccagctgacctca
ctgagaccgggccgtccgggtcagcaggaccgctacaacaccctggagatggagtacacg
cagcgccgctctgagctgctcgcaccactgttggagctgggtcagtaccagtgggtggcg
gcactggcagagaagtactgtgactttgacatcctggtccagatgtgtgagcagactgac
aaccagaacagactgcagcactacatggccaagttcgccgaccagaactttgcagacttc
ctgttccgctggtacatgcagaaggggaagaggggcaagctgctctcccagcccatcgcc
cagcaccagcagctggccagcttcctgcagtcccacgaacacctcagctggctgcaccac
atccacgtccacgacttcagcagtgcttacaaaaccctgtatggccaggccaacatggag
acgcgttactttgtgaagaagaagaccctgttggctctcagtaaactgactgccctggca
tcagacatgcctgaggctgtgatgaagaaacaagtagacgacatggtagagcaggagagg
ttcttgctgcaccaggagactctgcccaaacagctgctggaggagaaacaacagaaccca
gacaccatgcccctgctcagcgctcacaaccttattcgtctgtatatttgtgatgacaac
cgacgagccaatgagtatgacttcaagaaggctctggatctactggagtacatagatgag
gaggacgctgtggacattgagggactcaagtgtgagatcttctgcaaggccctcaagaaa
gacgactggttgtctgctgatgggaacgatgaccctctggaggcagccaaggacagcatc
tttgtcaagatcctcctcaagctcatacaagaaggtgttcctctacagacctaccttcct
gacgtcaaagaccttcttcagctggacgagatggaggctttgacatcaaagcccactttt
gagtttgtattgcgggccaactatgaacattacctgcaagcacagatctga
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