Salmo trutta (river trout): 115178704
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Entry
115178704 CDS
T08542
Name
(RefSeq) nuclear pore complex protein Nup133-like
KO
K14300
nuclear pore complex protein Nup133
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115178704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115178704
03036 Chromosome and associated proteins [BR:
stru03036
]
115178704
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115178704
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115178704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
115178704
NCBI-ProteinID:
XP_029595837
Ensembl:
ENSSTUG00000050770
UniProt:
A0A674F3T2
LinkDB
All DBs
Position
38:12918622..12930767
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AA seq
1136 aa
AA seq
DB search
MFSPRPTPSSGRRQSSRVTGRKSLAGTPTGLLFSPRRTSLAARSTPTRVQSYSTSEALHF
DVQTFGSSLPVKVMEALTMADADDQISVKVDESGWAWMVCGERLIIWKICQTAVAKLSVC
KGLQLPASEFAYYADLISISSPSPLETATVQSISVMAVAPEGTARFWPSLAHEGNYTETV
VDMGENLCNFVVAVRGGSFIVSSYKGQMMRLGADPSGKLLQRALQQGQGVLSGIGRRVSS
LFGMLAPLTNNNLHSVLWVGETGCLYTLTSCGLSKWEMDEVTEHQVLSWDSSRALTESVA
DAIWGSESNYEEIKEGVNVTYMDMQLSQDGLVVLAAAWHPSDSPCLAYFCLVTLLDNGNN
ISEELSVEVTKYNPPFQSEDALQAMRLMLPRASSPAAFLYNEELVFACSTGTGRGGLPEE
KIPFNTPGDRLCGGGCCANLPVFFSQNSGLVAVVARERASMLPETMEDSLCFSLAGAGPE
ATAMETPTRVEPVAQEDKTKLLKAAFLQFCRNDLVGAQTMTDELFPPDGDGDGELDLVVT
RINLDLVDDYPASDPRWAESVPDESAGFPLTSLIILHQLEDKMKAHGCFMDFLLQVGLLD
RLGQTAVRSSPMATRLLLCEHAEKLQAAMTLKNHHAKHGELVNRAILSALRKSNAAVSTS
LTAADVFFREVSQISSVFECLLEEEERTLKENPVDSVKWAEVVLSVNTIIKDMLQAAGQY
RDTKASLYRASESTPAESEYIPWTASSGLGGVRTVIARQHEVILRDVYPHADSELRNGLN
EQLAALLDVLLGGYVSQLTSLRPGRPGQQDRYNTLEMEYTQRRSELLAPLLELGQYQWVA
ALAEKYCDFDILVQMCEQTDNQNRLQHYMAKFADQNFADFLFRWYMQKGKRGKLLSQPIA
QHQQLASFLQSHEHLSWLHHIHVHDFSSAYKTLYGQANMETRYFVKKKTLLALSKLTALA
SDMPEAVMKKQVDDMVEQERFLLHQETLPKQLLEEKQQNPDTMPLLSAHNLIRLYICDDN
RRANEYDFKKALDLLEYIDEEDAVDIEGLKCEIFCKALKKDDWLSADGNDDPLEAAKDSI
FVKILLKLIQEGVPLQTYLPDVKDLLQLDEMEALTSKPTFEFVLRANYEHYLQAQI
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcccacgtcccacccctagttcaggccgcaggcagtcctcaagggtcaccggt
agaaagagtctcgccggtacacctacagggcttctcttttccccacgtaggacgtcgtta
gcagcgagatcaactcccacgcgtgtgcagagctactcaacttcagaagcactccacttc
gatgtccagacgtttggctcttctctacctgtcaaagtcatggaggctttgacaatggct
gatgccgatgaccagatctctgtgaaggtggatgagagtggctgggcctggatggtgtgt
ggagagagactgatcatctggaagatctgccagactgctgttgcaaagttgtcagtatgt
aagggcctccagctgcccgctagtgagtttgcctactatgctgatctcatctccatatca
tctcccagccctctggagactgccactgttcagtctatctctgtcatggcggtggctcca
gagggaacagcccggttctggcccagtttggcccacgaggggaattacactgagactgtg
gtcgacatgggcgaaaacctctgcaactttgttgttgctgttagggggggtagtttcatc
gtgtcatcctataagggccagatgatgcgtctcggggcggacccctccggaaagctgctg
cagagggcgctacagcagggccagggggtgctttccggcatcggacgccgcgtctccagc
ctgtttggcatgctcgccccgctcaccaacaacaatctccacagtgttctgtgggtggga
gagacgggctgcctgtatactctgacctcctgtgggctcagtaaatgggagatggatgag
gtcacagagcaccaggtcctcagctgggactccagccgcgctctgacggagagtgtagcc
gacgccatctgggggtcagagagcaactatgaggaaatcaaggaaggagtgaacgttacc
tacatggacatgcaactgagccaggatggcctggtagtgttggcggcagcctggcacccc
tcagactccccctgcctggcctacttctgcctggtcaccctgctggacaacggcaacaac
atctctgaggagctctctgtggaggtcaccaagtacaacccccccttccagagtgaggat
gctctccaggccatgaggctgatgttaccacgggcctccagccctgctgccttcctgtac
aacgaggagctggtgtttgcctgctccaccggtaccggcagaggaggtctacctgaggag
aagattcccttcaacacacctggtgaccgtctgtgtggtgggggctgctgtgccaacctg
ccagtgttcttctcccagaacagtggtctggtggccgtggtggccagagagagggcctct
atgctgcctgagaccatggaggactccctctgcttctccctggctggggccggccctgag
gcaactgctatggagactccgactagggtggagcctgtagcgcaagaggacaaaaccaaa
ctcctaaaagcagcgttcctgcagttctgccggaatgacctggtgggggcccagaccatg
acagacgagctgttccccccagatggggacggagacggggagctggacttggtggtgacc
cggatcaacctggacctggtggatgactacccagcgtcagacccccgctgggccgagtct
gtccctgacgagagtgctggcttccccctgacctccctcatcatcctccaccagctagag
gacaagatgaaggcccacggctgcttcatggacttcctgttacaggtgggtctcctggac
cggctgggccagaccgcggtgcgctcgtctcccatggcgacgcgcctgttgctgtgcgag
cacgccgagaagctacaggcggccatgacgctgaagaaccaccacgccaagcacggcgag
ctggtcaatcgtgccatcctcagtgccttgaggaagagcaacgcagccgtgtccaccagc
ctcacggccgccgacgtcttcttcagagaggtgtctcagatctcctcagtctttgagtgt
ctcctagaagaggaggagaggactctgaaggagaaccctgtggactctgtgaagtgggct
gaagtggtgctcagtgtcaacaccatcatcaaggacatgctgcaggctgctggtcagtac
agagacaccaaggcctcactgtacagagcctcagagagcacccctgctgagtcagaatac
atcccatggaccgcctctagcggtctgggaggggtgcgcaccgtcatcgcccgccagcac
gaggtgatcctgcgtgacgtgtaccctcacgccgactcagagctgcgcaatggcctgaac
gagcagctggcagccctgctggacgtgctcctgggaggctacgtttcccagctgacctca
ctgagaccgggccgtccgggtcagcaggaccgctacaacaccctggagatggagtacacg
cagcgccgctctgagctgctcgcaccactgttggagctgggtcagtaccagtgggtggcg
gcactggcagagaagtactgtgactttgacatcctggtccagatgtgtgagcagactgac
aaccagaacagactgcagcactacatggccaagttcgccgaccagaactttgcagacttc
ctgttccgctggtacatgcagaaggggaagaggggcaagctgctctcccagcccatcgcc
cagcaccagcagctggccagcttcctgcagtcccacgaacacctcagctggctgcaccac
atccacgtccacgacttcagcagtgcttacaaaaccctgtatggccaggccaacatggag
acgcgttactttgtgaagaagaagaccctgttggctctcagtaaactgactgccctggca
tcagacatgcctgaggctgtgatgaagaaacaagtagacgacatggtagagcaggagagg
ttcttgctgcaccaggagactctgcccaaacagctgctggaggagaaacaacagaaccca
gacaccatgcccctgctcagcgctcacaaccttattcgtctgtatatttgtgatgacaac
cgacgagccaatgagtatgacttcaagaaggctctggatctactggagtacatagatgag
gaggacgctgtggacattgagggactcaagtgtgagatcttctgcaaggccctcaagaaa
gacgactggttgtctgctgatgggaacgatgaccctctggaggcagccaaggacagcatc
tttgtcaagatcctcctcaagctcatacaagaaggtgttcctctacagacctaccttcct
gacgtcaaagaccttcttcagctggacgagatggaggctttgacatcaaagcccactttt
gagtttgtattgcgggccaactatgaacattacctgcaagcacagatctga
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