Salmo trutta (river trout): 115178743
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Entry
115178743 CDS
T08542
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115178743
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115178743
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
115178743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_NUP159_NUP214
Lgl_C
KNTC1_N
Beta-prop_VPS8
Beta-prop_Vps41
CFAP43_N
Beta-prop_WDR35_TULP_N
Synaptobrevin
WD40_like
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
115178743
NCBI-ProteinID:
XP_029595914
Ensembl:
ENSSTUG00000011658
LinkDB
All DBs
Position
1:complement(20294225..20439041)
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AA seq
1149 aa
AA seq
DB search
MKKFNIRKVLDGLKEQASSSVSSGQSGAPENNLMHETLQSENFQLCKTVRHGFPYQPSSM
AHDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVISLQFLINEGALVSALADDSVH
LWNLRQRRPAILHSLKFNRERITFVHLPFQSKWLYIGTEKGNIHIVNVESFTLSGYVIMW
NKAIELSSKAHPGPVVHISDNPMDEGKLIIGYEAGIVVLWDLKSKKADYRYTYDEAIHSV
AWHHEGKQFICSHSDGTLTIWNIKGQGKPFQTITPHGKQPKDGKKPEPCKPILKVEYKTT
RLGDPFMILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYSNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFE
KSRNNKEDKQNTEIVDEDPFAIQIMAWCPESRMLCVAGVSANLIIYRFSRQEITTEVVQL
LEVRLQYEVNDMESPPEGGGGGDRDLPTPGTASPSPQTTGPPTHPSTSSNSSDGVRDNVP
CLKVRSTPLKQSSGYQVELVVQLVWVSGEPPQQITSLALNSSYGLIVFGNSNGLAVVDYL
QKTVLLNLGTVELYGSNDPYQRQARSPRKTRQPAGGNGLCDINEGSASEDRCKSPTSVLA
SNHQQFYNGGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSV
TSIDKEAREAITSFHFCETFARKGDSAITPCLYVGTSLGTVLAVALNLPPAGEQRLLQPV
IVLPSGTLARLKGSILRMAFLDNTGTFLPPAFETWYEPNAAGADSEERDKARKRRPVSVS
PSTSQELQESQYAVVCSEKQAKVIALPSQNCIFKHSITETSFVLRADVVQMNIGNCVACF
CANGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQET
CENLQEMLGELFTPVETPEAPNRGFFKGLFGGGATSLDREELFGETQAGKASRGLAQHIP
GPQGLEGMKGAASGVVADLARARIALDERGQKLGELDERTAAMLASADSFGKHAHDMMLK
CKDKKWYQF
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacatcaggaaggtgctggacggcctaaaggaacaggcgtcttcctct
gtttcgtctggccagtcgggcgccccggagaacaatttgatgcacgagacccttcagtcc
gagaattttcagctctgcaagactgtccgtcatggcttcccctatcagccgtcgtccatg
gcccatgacccagtccagaagatcctggccattgggacccagagcggggccctcagactg
tttggtcgtccaggtgtggagtgctactgtcaacatgagagtggggcagccgtcatctcg
ctacagtttctcatcaatgagggtgcgctggtgagtgctctggcagacgacagcgtgcac
ctctggaacctgaggcagaggaggcccgccatcctccactcactcaagttcaacagagag
aggatcacattcgtccacctgccattccagagtaaatggctgtacatcggcacagagaaa
ggaaacatccacatcgtcaacgtggagtcgttcacactctcaggctacgtcatcatgtgg
aacaaagccatcgaactatcctccaaggcccacccaggtcctgtggtccacataagtgac
aaccccatggatgaaggaaagcttatcattggatatgaggctggaattgtggtcttgtgg
gatctgaaatctaagaaagcagactaccgctacacttacgatgaggcgatccactcggtt
gcctggcaccatgagggcaagcagttcatctgtagtcactcagacggaacgctcaccata
tggaacatcaagggccagggcaagccatttcagacaatcaccccacatggaaagcagccc
aaggatggaaagaagccagagccctgcaaacccatcctcaaagtggagtacaagaccact
agactgggagaccccttcatgatcctgtctggaggtctgtcatatgacacggtgggtcgg
cggccatgtctgacggtgatgcatgggaagagtacagccgtgctggagatggactatcct
atcgtagacttcctcacgctctgtgagacgccatactctaacgattttcaggaaccttat
gctgtagtggtccttctagaaaaggatttagtagtaatcgaccttgcacaaaatggttac
cccatattcgagaacccctatccactgaccatccatgagtctccggttacctgctgtgag
tactttgctgactgccctgtggacctcatacctgcactttactctgttggctccagacag
aaacgacagggctacagcaaaaaggagtggccaatcagtggtggtaactggggcctcggc
acacagagctaccctgagatcatcatcactgggcatgctgatgggactgtgaagttttgg
gacgcttctgcaataatgctccaggtactgtacaagctgaagacggccaaggtgtttgag
aagagcaggaacaataaagaggacaagcagaacacagaaattgtggatgaggacccgttt
gccatccagatcatggcctggtgtcctgagagcaggatgctgtgtgtggccggggtgtct
gccaacctcatcatataccgcttcagcaggcaggagatcaccaccgaggtcgtacagctg
ttggaggtacgtctgcagtacgaggtgaatgacatggagtcccctccagaggggggagga
gggggggaccgtgacctgcccaccccaggaacagcctcacctagcccccagaccaccgga
cccccgactcacccctccaccagcagcaactcctctgacggggtccgagacaacgtaccc
tgcctcaaggtgcgtagtacccctctgaagcagtcttcagggtatcaggtagagttggtg
gtgcagctggtgtgggtaagtggagagcccccccaacagatcaccagcttggccctcaac
tcctcctacggcctgattgtgtttgggaacagtaatggtctggcagtggtggactacctc
cagaagacagtgctgttgaacctggggacagtggagctgtatgggtctaatgatccctac
cagagacaggctcgctctccacgcaagacacgccagcctgccggaggtaatggtctgtgt
gacatcaacgagggatctgcctcggaggaccgctgcaaatcccccacttcagtgttggcg
tcaaaccatcagcaattctacaatggaggtgggggtagaggagcaaagatgtcacggaaa
ttaagcttgcctactgagctaaagccagacttggtcctcctgtctgtatgtcctccacgg
ggcgccaacccattagaccaccgggacaactccttcagccgttcacgctcctcctccgtc
acgtccatcgacaaggaggcgcgcgaggccatcacctccttccacttctgtgagacattc
gcccggaagggggacagcgccatcacaccatgcctgtacgtgggaacctccctgggaaca
gtgctggctgtggccctcaacctgccccctgctggggaacaaaggctgctgcagcccgtt
atcgtcttgcctagcggtaccctggcacgactgaagggcagtatcctgaggatggccttc
ctggacaacacaggaaccttcctcccccctgccttcgagacctggtatgagccaaacgcc
gcgggcgccgacagtgaggagcgagacaaggcccgtaaacgccgcccggtctctgtgtcg
ccctccacctcccaggagctgcaggagagccagtatgcggtggtgtgctctgagaaacag
gctaaggtcatagcactgccctcacagaactgcatcttcaaacacagcatcacagagaca
tcgttcgtcctgagggctgacgtggtccagatgaacatagggaactgtgtggcctgcttc
tgtgctaacggacacatcatgaccctcagtctgccggggctgagaccgttgctggatgta
aactacctgcctctgacagacatgcggatagcccggaccttctgctttaccaacctgggc
caggccatgtacctcacctcccccactgagatacagaggatcacatacagccaggagacc
tgtgagaacctgcaggagatgctgggagaactgttcacaccagtggaaaccccagaggct
cccaaccgaggattcttcaagggcctttttgggggaggagcaacttccctggacagagag
gaactatttggtgagacgcaggcgggtaaggcgtcccgtggccttgcccagcacatccca
ggtcctcagggcctggagggcatgaaaggggcagcctcgggcgtggtggcggacctggcg
cgtgcccggatagcactggatgagagagggcagaaactgggcgagctggacgagaggacg
gctgccatgttggccagcgccgactcctttggcaaacacgcccatgacatgatgctgaag
tgcaaagacaagaagtggtaccagttctga
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integrated database retrieval system
