Salmo trutta (river trout): 115178754
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Entry
115178754 CDS
T08542
Name
(RefSeq) myocyte-specific enhancer factor 2D homolog isoform X1
KO
K09262
MADS-box transcription enhancer factor 2D
Organism
stru
Salmo trutta (river trout)
Pathway
stru04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115178754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115178754
04131 Membrane trafficking [BR:
stru04131
]
115178754
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
115178754
Membrane trafficking [BR:
stru04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115178754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
RNase_H2_suC
VPS13_N
CpG_bind_C
Motif
Other DBs
NCBI-GeneID:
115178754
NCBI-ProteinID:
XP_029595899
Ensembl:
ENSSTUG00000038857
LinkDB
All DBs
Position
3:complement(53741127..53814959)
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AA seq
576 aa
AA seq
DB search
MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNVDIMEALNKKEHRDSESPDPEEPFSLTPHTEEKYKKIDE
EFDKMMQSYRLSSAVPQPTFSMPVTVPVSNQNALQFSNSGGLVTTSFVTSTLTDPRLLSP
QQPSLQRNTGSPGLPQRPASAGALLGGELSNSNGGCPSPVPNGYISARASPGLLSISNGN
SLGKVVLAKSPPPPSPQMVNSRKPDLRVITSQSGKSLMQLTDEELELVSENAQRLGGSQG
NLSTPVVSVATPSLLAPFSAMQTAYNTEYQLTSADLTALQTFTPSGLLPSNMSTWQQQPA
VSQQQQQQQQQQQQQQQQQQQQQQQQISLASLSNLVMWGAEKQNGEMANCISNFAANLSM
ASQSNLLFGREEGLCWPVGHLPQGTMLTINTNPNISIKSEPVSPNRDRSTPCSTAGGGGG
GGLVTITGAPMSGQYPGALRLEPSTLQGRSPVGSLSSNGSSYEGDRDDGAQGRAQDFHHQ
GGASSAMGLLRPSSTQEQQEHEGANVKRMRLDTWVT
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaaaaagatccaaatacagaggattacagacgaacggaacagacaggtgacg
ttcaccaagaggaagtttggcctgatgaagaaggcgtatgagctgagcgtgctgtgcgac
tgtgagatcgccctcatcatcttcaaccactccaacaagctgttccagtacgccagcacc
gacatggacaaggtcctgctcaaatacaccgagtacaacgagccccacgagagccgtacc
aacgtcgacatcatggaggctctgaacaagaaagagcaccgggactcagagagcccagac
cctgaggagcccttctccctcaccccccacactgaggagaaatacaaaaaaattgacgag
gagtttgataaaatgatgcagagctataggctgtcatcagccgtcccacagcccactttc
tccatgcccgtcacggtgccagtgtccaatcagaatgctctccagttcagtaactctggc
ggcctggtaaccacttccttcgtcacctccaccctcacagacccccgcctgctgtcgcca
cagcaaccatctctccagaggaacactgggtctccagggttaccacaacgaccggccagc
gcaggtgctctattaggaggtgaactgagcaactccaacggaggatgcccgagccctgtt
ccgaacggctacatcagtgccagggcctcccccggcctcctctccatctccaacggcaac
agcctggggaaagtagtcctggccaagtctccacctccgcccagccctcagatggtgaac
agccgcaagcctgatctccgggtcatcacctcccagagcggcaagagcctgatgcagctg
accgatgaggagctggagttggtgagtgagaatgctcagcggttaggtggttctcaaggg
aacctgtccacgccagtggtttccgtggcgacgcccagtctcctagcccccttctccgcc
atgcagacggcctacaacactgagtaccagctgacaagtgcagatctcacagcgctccag
acattcacgccatcagggctgctgcctagcaacatgtccacctggcaacagcaaccagca
gtatcccagcagcagcagcaacaacaacagcagcagcaacaacaacagcagcagcagcag
cagcaacaacaacaacagatcagcttggcgtcactcagtaacttggtcatgtggggcgca
gagaaacagaacggggagatggctaactgcatctccaatttcgctgctaacctgagcatg
gcctctcaatcaaacttgctatttggcagggaagagggtctctgctggccggtgggccac
ttaccccagggcaccatgctgacgattaacaccaaccccaacatcagcatcaagtcggag
cccgtgtcgcccaaccgcgaccgcagcaccccgtgctccacagctgggggtggcggagga
gggggcctagtgaccatcacaggggcccctatgtcaggccagtacccaggggccctgcgc
ctggagccgtccaccctgcagggccgctcgcccgtcggcagcctgagcagcaacggcagt
tcctacgagggtgaccgggacgatggggcccaggggcgggcccaggacttccaccaccag
ggaggggcctcctctgccatggggctcctgaggccctcgtccactcaggagcagcaggag
catgagggggccaacgtgaagagaatgagactggacacctgggtcacatag
DBGET
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