Salmo trutta (river trout): 115178896
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Entry
115178896 CDS
T08542
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115178896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115178896
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
115178896
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
115178896
NCBI-ProteinID:
XP_029596165
Ensembl:
ENSSTUG00000016700
LinkDB
All DBs
Position
38:19708431..19737720
Genome browser
AA seq
527 aa
AA seq
DB search
MLGGNGAGIGTRPGGARPGNGTGLTALQVNNPGTNMSGAEGGRFDDRIRQYSAEVVYSGS
EPESDSGDDDETMGSAGDKRGVKRERAEMEVAASATSAGLPPGGYGGVAGGATGAKPGKK
TRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFAT
RKLQPMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSEGDGCTEP
TKDMMKPTFTMANLPASVNTQPTSSSSSSTTSSVAMHLQNSIPATCWQVSAGINTHSATS
SANGTVLKTSATSTSVMLPGGFTLMSGATLPPGTHTIPLSQLQAFQGPLAQTSITTAGHT
QQGQHTTLLRLPATVSLTGGGMGQQLQAIQVHPSSQQSSVSHSDLSHITSNSTVSLPTTI
VTSSVPSSMGGHMMYPGAHTVMYATPTTSLGDGSLTVLNTFPQTAHTQSHDPGAVSQVFL
TGHPGTVQIPVSAVQLHPMVIGQQSSSSNLTELQVVNLDAHHHSKDD
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgttggggggaaacggggcaggaataggtacaagaccagggggcgcacgacctggaaat
gggactgggttgaccgctctgcaagttaataacccgggaacgaacatgagtggtgccgaa
ggtggaaggtttgacgaccgaatcagacaatactcagccgaggtggtgtacagcggctct
gaaccagagtccgactccggggatgatgatgagaccatgggctcagccggggacaaaaga
ggggtgaaacgggagagagccgagatggaagtcgctgcatcggcgacgtctgcggggcta
cccccgggaggttatggcggtgtcgcgggaggtgcaacaggggcaaagccaggcaagaaa
acccgcggacgagtcaagatcaaaatggaatttatagacaacaaacttcggcggtacaca
acttttagcaagaggaagactggcattatgaagaaggcctacgagctctccactctaaca
ggcacccaggtcctcctcctggtggccagcgagacaggccacgtctacacgtttgccaca
cgcaagctccagcccatgattaccagtgagacgggcaaggcgctcatccagacgtgcctc
aactcgcccgactcgccgccccgcaatgacccgtccaccgaccagcgcatgagcgccaca
ggcttcgaggagacggacctcacctaccaggtgtcggagggtgacggctgcacagagccc
accaaggacatgatgaagccgacgttcaccatggccaatctgcctgccagtgtcaacacc
caacccacgtcgtcctcctcttcctccaccacctcctccgtggccatgcacttgcagaac
agcatccctgccacctgctggcaggtctcggcgggcatcaatactcacagtgccaccagc
agtgccaacggcacggtgctgaagacctcggccacgtcaacgagtgtcatgctacctgga
gggttcaccctcatgtccggcgcaacgcttccccctggcacgcacaccattccactcagt
cagctgcaggccttccagggccccttggcccagaccagcatcaccaccgcagggcacacc
cagcagggccagcacaccaccctgctccgcctacctgcaactgtctcgctcacaggtgga
gggatgggccagcagctgcaggccattcaagttcaccccagcagccagcagagctctgtg
agccacagtgacctctcccacatcacaagcaactccacagtgagcctccccaccaccatt
gtcacgtcctcagtgccctcatcaatgggtggtcacatgatgtatcccggcgcccacact
gtcatgtacgccacacctacgacctcgttgggtgacggcagtctgaccgtgctcaacacc
ttcccacagacagcccatacacagtcccatgaccccggcgctgtatcgcaggtgttcctc
acagggcatcctgggacagttcagatccctgtgtcagcagtacagctccacccgatggtg
attggtcagcagtcaagcagcagcaacctcacagagcttcaagtggtcaacctggacgcc
catcatcactcaaaggacgattga
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