Salmo trutta (river trout): 115178908
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Entry
115178908 CDS
T08542
Name
(RefSeq) protein jagged-1b-like isoform X1
KO
K06052
jagged-1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04330
Notch signaling pathway
stru04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115178908
04371 Apelin signaling pathway
115178908
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
stru04090
]
115178908
CD molecules [BR:
stru04090
]
Proteins
115178908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_2
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
EGF_3
Motif
Other DBs
NCBI-GeneID:
115178908
NCBI-ProteinID:
XP_029596190
Ensembl:
ENSSTUG00000049404
UniProt:
A0A674EWF6
LinkDB
All DBs
Position
38:complement(18309291..18341443)
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AA seq
1245 aa
AA seq
DB search
MILRPSSSCAAFSIHVFLQCMWFKVAVASGHFELQIVSMQNVNGELQTGVCCDGSRNAAD
RKCTRDECDTYFKVCLKEYQLKVSSAGPCSFGTASTPVVGGNTFSLRNMRSDKSRIVLPF
SFAWPRSYTLIVEALDFNNDSSTGSVGGERIEKAVQSGMINPSRQWQSLKHNGPVGQFEY
QIRVSCDEHYYGFGCNKFCRPRNDFFGHYNCDHNGNKTCLEGWSGPECSTAICRQGCSTE
HGSCKLPGDCKCLYGWQGEYCDKCIPHPGCVHGSCVEPWQCLCDTNFGGQLCDKDLNTCG
TFQPCQNTGTCSNTGPDKYHCACPDGYSGINCEKAEHACLSGPCFNGGSCVETSQGFECQ
CGPGWSGPSCSINVDECFPNPCGHGGTCQDQVNGFKCTCPFQWSGKTCLIDANECEGDPC
LNANSCRNLIGGYFCECLPGWMGQNCDTNINDCQDQCQNGGTCKDMVNGYRCVCPSGFGG
EHCEKDVDECASGPCLNGGRCKDDVNGFQCLCLPGFSGNFCQLDIDYCMPNPCQNGAQCF
NLATNYFCKCPEDYEGKNCSHLKDHCRTTPCQVIDSCTVAVASNSTPGGMRLISSNVCGP
HGRCRSQAGGQFSCECQEGFTGTYCHENINDCESGPCQNGGTCIDKVSLYQCICAEGWEG
PNCDNNIDDCNTNPCRNRGTCRDLVNDFYCECKNGWKGKTCHSRESQCDEATCNNGGTCY
DEGDTFKCMCAAGWEGATCNIAKNSSCLPSPCENGGTCVVSGDSFTCVCKEGWEGLTCNQ
NSNDCNPQPCYNSGTCVDGDNWYRCECAAGFAGPDCRININECQSSPCAFGSTCVDEING
YRCLCPPGRAGPRCQEVTGRPCVVNGLVAVDGTKWDDDCNTCQCHNGKVTCTMIWCGPKS
CRVHSKSHSGGECPVGQMCVPVRDECCFVKPCPSQGECWSASHSPKPHAKCHPESNCANV
TFTFNKDTMPQGLTVENICSELRSLYVVRNLSSEYSVSMTCEPSATANNEIHVAISTEDP
RRGKAPIKEITDKFIDLVSKRNGNSTIITAIIEVRVQRRQIHNPNADYLVPLLVSVVIII
WLLAVASAFIWCIKRRRKPSTHTGVNTQSSSPATTAEDTNNAVNNVREQLNQIKNPIDKH
SLANGLPPVKEHPNHYHYEDKNSLINAKIRTNNSDVGSHHSDDEESEKRFQKARFPRQTP
YTLVDREERSPQPLSTAGKHPNWINKQDNRDLESAQSLNRMEFIV
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagaccgagttcaagctgtgctgctttttctattcatgtcttcttgcaatgc
atgtggtttaaggtggctgtggcatcaggacacttcgaattgcaaattgtgtcgatgcag
aacgtgaatggcgaactgcagactggtgtgtgctgcgatggatctcggaacgccgcagat
cgcaaatgcacgagggacgagtgtgatacctattttaaagtgtgtctaaaggagtaccag
ttgaaggtctcttcggcgggcccatgcagtttcgggacggcatcaacacccgtggtcgga
gggaatactttttctttgcggaacatgaggagtgacaagtccaggattgtgttaccgttc
agcttcgcttggccgaggtcctatacgttgatcgtggaggccttggacttcaacaacgac
tcttctacgggcagcgtgggaggcgagaggatcgagaaggctgttcagtcgggcatgatc
aaccccagccgccagtggcagagcctgaagcacaacgggccggtgggccagttcgagtac
cagatccgggtcagctgcgatgagcactactacggtttcggctgcaacaagttctgccgt
ccgcgcaacgacttttttggccattacaactgcgaccacaacggcaacaagacctgcctc
gaagggtggtctggaccagaatgcagcactgctatttgcaggcaaggctgcagcactgaa
catggttcctgtaaattgcccggagattgcaagtgtctgtacggctggcagggcgagtac
tgtgataagtgcatccctcacccgggctgtgtgcacggaagctgcgtggaaccgtggcag
tgcctctgtgacacaaactttggcggccagctctgcgacaaagacctgaacacatgtggt
acgttccagccctgtcagaacacggggacctgcagcaacactggacctgacaagtaccac
tgtgcctgtcctgacggctactctggtatcaactgcgagaaagcagagcatgcctgtctg
tcggggccctgttttaacggagggagctgtgtggagaccagtcagggcttcgagtgccag
tgtggccccggctggagtggcccctcctgcagcatcaatgtggacgagtgtttccccaac
ccctgtggccatgggggcacctgccaggaccaggtcaacggcttcaagtgcacctgtccc
ttccagtggagtggcaagacctgcctcatcgacgccaatgagtgcgaaggcgacccctgc
ctgaatgccaactcctgccgcaacctgattggagggtacttctgcgagtgcctccccggt
tggatgggccagaactgcgacaccaatattaatgactgccaggaccagtgtcaaaatggg
ggaacctgcaaggacatggtgaacgggtaccgctgcgtttgtccgtcgggcttcggcggc
gagcactgcgagaaggacgtagatgagtgtgccagtggcccgtgcctgaacggcggacgt
tgcaaggacgacgtcaacggcttccagtgcctgtgcctgcccggtttctctggcaacttc
tgtcagctggatatcgactactgcatgccgaacccatgtcaaaacggggcccagtgtttc
aacctggctaccaactacttctgcaaatgtcccgaagactacgagggcaagaactgttcc
catttgaaggaccactgtcgtaccacaccctgccaagtgattgacagctgcacggttgcc
gtggcatccaacagcacccctgggggcatgcgtctgatttcgtccaatgtgtgcgggccc
cacgggcgctgccggagccaggctgggggccagttcagctgtgagtgccaggagggcttc
actgggacatactgccatgagaacataaatgactgtgaaagcggcccgtgtcagaacggg
ggaacgtgtattgacaaagtcagcctctaccagtgcatctgtgccgagggttgggaggga
cccaactgcgacaacaacattgacgactgcaacaccaacccctgtcgcaaccgcggcacg
tgccgggacctggtgaacgacttctactgtgagtgcaagaacggatggaagggcaagaca
tgtcactcaagggagagccagtgtgacgaggctacatgcaacaatggcggaacgtgctac
gatgaaggggacaccttcaaatgcatgtgtgccgccggatgggagggtgccacctgtaat
atagctaagaacagcagctgtctgcctagcccttgtgagaacggaggcacctgtgtggtc
agtggagattcgttcacctgtgtctgcaaagagggctgggagggcctgacctgcaaccaa
aattccaacgactgcaatccccaaccttgctataacagtggaacctgtgtggacggcgat
aactggtaccggtgtgagtgtgccgcaggattcgcaggaccagactgcaggattaacatc
aacgagtgccagtcgtcgccttgcgcgttcggctccacctgcgtcgacgagatcaacggc
taccgctgcctgtgtccaccagggagggccggccccagatgccaagaagttactgggaga
ccctgtgttgtcaacggtctggtggccgtggacgggaccaaatgggacgacgattgcaac
acctgccagtgccacaatgggaaggtcacctgtacaatgatctggtgcggtcccaaatcc
tgccgggtccacagtaaaagccacagcggtggcgagtgcccggtcggtcagatgtgtgtg
cccgtccgggacgagtgctgttttgtcaagccatgccccagccagggcgagtgctggtcg
gcctcccacagtcccaagccccacgcaaagtgccaccccgagagcaactgtgccaacgtc
accttcaccttcaacaaggacaccatgccacagggcttgactgttgagaacatctgcagc
gagctaaggagtctgtatgtggtgaggaacctctcgtcggagtactcggtgtccatgaca
tgcgagccatcggccacagccaacaacgagatccatgtagccatctcgacggaggacccc
agaagaggcaaggcccctatcaaggagatcacagacaagttcatagacctggtcagcaag
cgaaacggcaacagcactatcatcacagccatcatcgaggtccgcgtccagaggaggcag
atccacaaccccaatgcagactacctggtccccctgctggtgtccgtagtcatcatcatc
tggctcctggctgtggcctctgcttttatctggtgcatcaagcggcgccgaaagcccagc
acccacacgggtgtcaacacccagtcgtcgtcccctgcgacgacagccgaagacaccaac
aacgcagtcaacaacgtacgcgagcagctcaaccagatcaagaaccccatcgataaacac
agtctggccaatggcctacccccagttaaagaacaccccaaccactatcactacgaggac
aagaactcccttatcaacgccaaaattagaacaaacaactcagacgtgggtagccaccat
tcggatgacgaggagtctgagaagaggtttcaaaaggctaggttcccaaggcagacaccg
tatacgctagtggaccgggaggagcggagcccacagccgctcagcacggccggcaaacac
cccaactggattaacaaacaggacaacagagacttggagtcggcgcagagcttaaaccga
atggaattcattgtatag
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