KEGG   Salmo trutta (river trout): 115178910
Entry
115178910         CDS       T08542                                 
Name
(RefSeq) RNA exonuclease 5-like
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
stru  Salmo trutta (river trout)
Pathway
stru03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    115178910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:stru03009]
    115178910
Ribosome biogenesis [BR:stru03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    115178910
SSDB
Motif
Pfam: RRM_1 RNase_T Phosphodiest
Other DBs
NCBI-GeneID: 115178910
NCBI-ProteinID: XP_029596198
Ensembl: ENSSTUG00000022347
LinkDB
Position
38:29459716..29472306
AA seq 885 aa
MDPQVCLERKGEPSPTPESSKQVKETELNGVPESEHRSGSRPPRLSLPFDRLQEPVTLKD
LTELLQFAALGNTGGLKQPSWCRLHHQRKVSGVSVILLEGLSQAHFYRHYLHFKHLRTKY
TSRHSYTPSPGNVISGIFSSEVVNNSPADALGDQKSAQPEGGMRLHPVIRKFGLETRGLT
GYLLTQEDMIKKHFPVRGMPGSEGFVCTDSDDCVTDSSPLYGLDCEMCLTEWGNELTRIS
LVDSRGSCVLDELVKPPNRILNYLTQFSGITRAMLQPITTTLREVQSKLKKVLPRDAVLV
GHSLDNDLMALNLIHPHVIDTSLLYRREFGQRFKLKVLAETVLKKQIQTEERKGHDPTED
AQAALELAQYFIHTGPRQVVELYCEELWGGSPTMYQPPVNRATSTHNNNRFAQALKSSGQ
SAVVIGKRADITLDLSNQQWHSSDREVLSSFKRRLESHSFSVVQLSSFSDHLMSMISTDQ
HYHTMSQRLREMCAVFAGPLPSDYTERDVRRLFRSCGNVQAVRLLNATQRVHAEVEFELL
EGAVLAVEMLNGTLLHTRHILKVQRPLKESMLDLDVFLSCLQDDPLNANVIYAAGLKANA
KTAQLAAKVNGTGLNANAATEVNETGLNANIAALPAKVNRARLHAKANHSGLLEKVNGTF
LNAKAKLAEVNGPGLHAKAKFAKLAELSAEVNSTLLKAKTMLAEIAAEANVGARLHAKTA
GLCEEDLCRAFGKYGTVQGVILPAKHSGKQKRMRHAFLKYDSPDTVDAVLSSPVELWDRK
VSTLRALTPPHLRSWITMMTTTGSDRETPDESSQETGREEQEVACVMRKLDRRVGKLFRS
LPDNTLSIVLLPGHNSSHGDGLCFLEVKQGSAALSDHAHNLMLPA
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggatccacaagtctgtctcgagagaaagggggaaccttccccaacaccagagagcagt
aaacaagtgaaagagacagaacttaacggagttccagagtctgagcaccgttccggttcc
cgacccccacggctctctctgccgtttgaccgtctccaggaaccggtcacgttgaaagat
ctgacggaactgcttcagtttgctgctctggggaataccggtgggctgaaacaacccagt
tggtgtcgcctccaccaccagaggaaggtatccggggtgagcgtgatccttctagaagga
ctgagccaggcccacttctacagacactacctgcacttcaaacacctccgcaccaagtac
acctctagacacagttatactccatcgcctggcaacgtgatttctggaattttcagcagt
gaagttgtcaacaatagtcctgctgatgcgctaggagaccagaagagtgctcagccagag
ggaggtatgcggttgcacccagtgatcaggaagtttggtctggagaccagagggctgact
ggatacctcctcacccaggaggatatgatcaagaaacacttccctgtccgcggtatgcct
ggcagtgagggctttgtgtgtacagacagtgatgactgtgtgactgacagtagtcctctc
tatgggctggactgtgagatgtgtctgacagaatggggcaacgagctgacgcgtatttct
ctagtagacagcagagggagctgtgttctggacgagctggtcaaacctcccaaccgcatc
ctcaactaccttacacagttctctggtatcacccgtgcaatgctgcagccaatcaccacc
accctaagagaagtccaatcaaagctcaagaaagtgttgccccgggacgcggtcctggtt
ggccactcccttgacaacgacctcatggccctgaacctgatccacccccatgtgattgac
acctccctgctgtacaggagagagtttggacagaggtttaaactcaaggtgctggctgag
accgtgctcaagaagcagatccagacagaggagaggaagggtcatgaccccacagaagac
gcccaggctgccctggaactggcccagtacttcatacacactggaccacgacaggtagtg
gagctgtattgtgaagagctgtggggtgggagtcctaccatgtaccagcctcctgtcaac
agagcaacatctacacacaacaacaacaggtttgcccaggccctgaagagttctggccaa
tcagccgtggttatagggaagcgtgctgacatcaccctggatctatccaatcagcagtgg
cacagctcagacagagaggtcctgtcttcctttaaaagacgactagagtctcactcgttc
agcgttgtccagttgtcttccttctctgaccatctgatgtctatgatctctactgaccaa
cactaccacacgatgtctcagcgtctgagagagatgtgtgcggtgtttgcagggccgttg
cctagcgactacacagagagggatgtgaggaggctgttcaggagctgtggaaacgtacag
gctgtcaggctgctgaatgctactcagagggtgcatgcagaggtagagtttgagctgctg
gagggagctgtgctggctgtagagatgctcaacggaacactgctacacacccgacacatc
ctcaaggtccagagacctttaaaggagtccatgctggatctggacgtcttcctgagttgc
ctgcaagatgacccgctaaatgctaacgtcatctacgccgcagggctaaaggctaatgct
aaaacagcacagcttgcagccaaagtcaatgggactgggctaaatgctaacgcagcaact
gaagtcaatgagactgggctaaatgctaacatagcagcactcccagctaaggtcaataga
gctaggctacacgctaaagcgaaccattcagggctcttagagaaagtcaatggaactttt
ctaaatgctaaagctaagctagctgaagtgaatggacctgggctacatgctaaagctaaa
tttgctaagctagcagagctctcagctgaagtcaatagcactctgctcaaagcgaaaact
atgctagcagagatagcagccgaagccaatgttggagcgaggctacatgccaagactgcc
ggactctgtgaagaggacctctgcagggcctttggaaagtacggaacggttcagggcgta
attctacctgcaaagcactctggaaaacagaaacgtatgagacatgctttcttaaagtat
gatagtcctgacactgtggacgcggtcctcagctcacctgtggaactctgggacaggaag
gtgagcactctcagagccctgactccgccccacctgcgctcctggattactatgatgacg
acgactgggtctgacagagagacaccggacgaatcgtcacaggaaactggaagagaggaa
caggaagtggcgtgtgtgatgaggaagttggaccggcgcgtggggaagctgttcagatct
ctacctgacaacaccctcagcatcgtactgctgcctggtcacaacagttcccatggcgat
ggtctgtgtttcctggaggtcaaacaggggtcagcagcactcagtgaccatgcccacaac
ctgatgctacctgcatag

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