Salmo trutta (river trout): 115179058
Help
Entry
115179058 CDS
T08542
Name
(RefSeq) semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
stru
Salmo trutta (river trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
115179058
NCBI-ProteinID:
XP_029596238
Ensembl:
ENSSTUG00000000260
UniProt:
A0A673VWL0
LinkDB
All DBs
Position
3:54353912..54473560
Genome browser
AA seq
1106 aa
AA seq
DB search
MRLVPGSPRPLPLLAVVLALALTALLPHLAIGVTPFPQDLVPISIGGREHSYLYPSFQGL
MSDNDTVRLGLDFQRMLRINHMLYIAARDHVFAVSLSASSEQIVPQQKLTWKTKDVDKCT
VRGKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQDGEEVVGQARCPFE
SRQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIE
YGNYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPG
DSFFYFDVLQSLTNVLQINLRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFNGKFKEQR
NSESAWTPVPEEQVPKPRPGCCAGDGSAAAYKSSTTFPDDTLTFIKNHPLMDEAVPSVNH
RPYFTRTTSRFKLTQLAVDTSAGPYKNHTVLFLGSEDGRVLKILASTHLNASFSTQLLED
IDVYNPTKCNVRGEDRRVLGLELDREHHALFVAFSSCVVRVPLSRCNDYGSCKKSCLSSR
DPYCVWQRTGSCVTVVPGFRGGFEQDVENGYPHYPDSCHDVLATTRKQNTLADSAYGKTT
PTTTASTTIQVAPFPKVAGDSERGTGPDGGPPVPVGDQGSPDSEPISVEMEGVRRPPEME
KTNHSVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGHKTKRLAKDPEAPIPHALSLRS
LAKLNGLLECQNKEDKMEVSSPKLYNSFFQNGKEHHQGAPRRNGGHHPGMSMGDQVHPHH
LHHSSELSGLPTPDSTPELPIKNMKAFKNQWEKNQNCNNAKEPKSHNMGQGSRPSSGQLH
QQIYPYSHSFSNGQALANGHALVGGPQPLEERKIHNTERMLVQQPYPCYPQKVMEVTSLD
ELLKHIHEANASKNAQVMTSSGLSASGGCHGGQLAFANRVQPHIPETESAPYYSSSTLPR
DSLTRRMDVPPDMPPHHQSTLERRHSSQRHSLITAATKIANGGGGGGMVHRQQSFSQRNG
HQQQPPPMLARMNSTGSACEIHYPLIPNGYLTRHQSYNGEKQEDTGGYLHRGAIVRRTTS
LKPDVPPKPLFIPASSPVNQQGNFNY
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtgcccgggtcgcctcggcccctcccccttctggcagtggtcctggctcta
gccctcacagcactcttacctcacctggccattggagtcacacccttcccccaggacctg
gtgccaatcagcattggggggagagaacactcctacctgtacccaagcttccagggcctc
atgtcggacaacgatacagtacgactgggcctggacttccagaggatgctccggatcaac
cacatgctctacatcgcagccagggatcatgtgtttgctgtcagtctcagtgcctcctct
gagcagatcgtcccacaacagaaattgacttggaagacaaaggacgtggataaatgcaca
gtgagggggaagaacagcgatgagtgctacaactacatcaaagttctggttccacgcaac
gacgagacgctatttgcctgcggtaccaacgcctttaaccccacctgccgcaactacaag
atgtctacactggaacaggatggtgaggaggtggtgggtcaggcccgctgtccctttgag
tctcgccaatccaacgtcggcctcttcgctggtggcgatttctactcggccaccatgaca
gacttcctggcgagtgatgcggtaatttaccgtagtctgggagagagcagcccggtgctt
cgtaccgtgaagtacgactccaaatggctacgagagcctcatttcctccatgccattgag
tacgggaactacgtgtacttcttcttcagtgagattgctgtggagtacaccacacttggc
aaggttgtgttctccagagtggctcgtgtatgtaagaacgacaacggaggttctcccagg
gttctagagcgttactggacgtcgttcctcaaagcgcggctcaactgctcggtgccgggc
gattccttcttctactttgacgttctgcagtcgctgaccaacgtgctgcagatcaatctc
agaccagccgtgctgggggtcttcactacacaggccaacagcatcacaggctcagcagta
tgtgcattctacatggacgacattgagaaggctttcaacgggaagttcaaggagcagagg
aacagtgagtcagcctggacacccgtgcctgaggagcaggtacccaaacccagaccaggc
tgctgtgccggcgacggctctgctgctgcctacaagtcgtccacgaccttccccgacgac
accctgaccttcatcaagaaccaccccctgatggacgaggcggttccctccgtcaaccac
cggccctacttcacacgcacaaccagcaggttcaagttgacccagctagcagtggatacg
tcagctgggccctataagaaccacacggtgctgttcctggggagcgaggacggcagggta
ctgaagatcctggccagcacccatctcaacgcctccttcagcacacagctactggaggac
atcgatgtctacaaccccaccaaatgtaatgtccgcggagaggaccgacgggtcctggga
ttggagctggacagggaacatcacgctctgtttgtggccttctccagctgtgtggtccga
gtacctctgagccgctgcaacgactacggctcctgcaagaagagctgtctgtcctcgagg
gacccttactgcgtgtggcagaggactgggagctgtgtcacagtggtgcccggattcagg
ggcggatttgagcaggatgtggagaacggctaccctcactacccagacagctgccatgac
gtcctggcgaccacacgcaagcaaaacactcttgctgattcagcatatgggaagaccaca
cccacaacaaccgccagcacaaccattcaggtggccccattccctaaggtggcaggtgac
tctgaaagaggtacaggtcctgatggcggtcctccagtcccagttggggaccaggggtca
cctgactcggaaccaatcagtgtggagatggagggtgtccgacggcctcccgagatggag
aagaccaaccacagtgtccactacaccctgctgattgcctgtgtgctggtggcctttgtc
cttggagccttcctctcaggctttctggtctcctgctactgcaaccacaccggccacaag
accaagaggctggccaaggacccggaggcccccattcctcacgcactgtccctacgcagc
ctggccaagctcaatggcctgctggaatgccagaacaaggaggataagatggaggtgtcc
tcgcccaagctctacaactccttcttccagaacgggaaggagcatcatcaaggagcaccc
agacggaacggtggtcaccacccagggatgtccatgggagaccaggtccacccccatcac
ctacaccactcttcggagctctcgggtctgcccaccccagactccacccctgaactgccc
atcaagaacatgaaggctttcaagaaccagtgggagaagaaccagaactgcaacaatgcc
aaggagcccaagtcccacaacatgggacaaggctccaggcccagctcaggccagctccac
cagcagatctacccctactctcacagtttctccaatgggcaagctctggccaatgggcat
gccttggtcggtggacctcagcccctggaggaacgcaagatccacaataccgagcgcatg
ttggtccagcagccttacccctgctacccgcagaaggtgatggaggtcacgtcactggac
gagctgctcaaacacatccacgaggccaacgccagcaagaacgcccaggtcatgacctca
tccggcctgtcagccagcggcgggtgccatgggggtcaactagcctttgccaaccgtgtc
cagccgcacatccccgagacggagtctgcgccttactacagctcttccaccctgccccga
gacagcctgacccgccgcatggacgtacctccggacatgccccctcaccaccagtccacc
ctggagcggaggcactcttcccagagacactcactgattaccgctgccactaagattgcc
aacggagggggtggtggagggatggtccaccgacagcaaagcttcagccagcgtaacggc
caccagcaacaaccgccccctatgctggctcgaatgaactccaccggcagcgcctgcgag
atccactacccgctcatccccaacgggtacctgacacgccaccagagttacaacggagag
aaacaggaggataccggaggatacctccaccgaggggccatagtccgccggaccacctcc
ctcaaacccgacgtccctcccaaacccctcttcatccctgcctcctctcccgtcaaccaa
cagggaaacttcaactactga
DBGET
integrated database retrieval system