Salmo trutta (river trout): 115179134
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Entry
115179134 CDS
T08542
Name
(RefSeq) chondroitin sulfate proteoglycan 5-like isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
stru00535
]
115179134
Proteoglycans [BR:
stru00535
]
Cell surface proteoglycans
Others
115179134
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Motif
Pfam:
Neural_ProG_Cyt
YxzE
Motif
Other DBs
NCBI-GeneID:
115179134
NCBI-ProteinID:
XP_029596281
Ensembl:
ENSSTUG00000001622
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Position
3:complement(54589515..54618810)
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AA seq
530 aa
AA seq
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MNGKEARFCSGCWRQMMLSSILVLHLIPFFVHGNTLGANVTELDTANVTSLPSKVEEAAK
VNDVVIEVTGVSGSVSPVVTVTQRAGRMPRSKEEQGSGMLGEGVLPAEKEVVDPPRISLD
SAETEFLLPSNPRGTEEEEDEEEHTDPPWLNARDNNVDLDRRFTEGVANLATTTAPPPAA
ANPSRPDVLTVDFFDPASRGRGLDLAPPSPSSLAHELQGGDPTSWAMPTNYDYITPYEEG
ASPTPDEYSYTTTTETLDGDDDLRLTAGPPSRSRPRAPPGSGSFTPDKRLPSGGAAAAPE
GPAAAPPALPVDGSDGTGGCRQGYVKQNGTCRSPCDTLPSYCFNGGQCYLLDGMGVFCRC
NVQDYIWHKGSRCESVVTEFQVLCLTIGASALMVLLLFMIIVCFAKKLHVLKTENSKLRK
RSSKYRPPSEQHNDNFSLSTIAEGSHPNVRKLCDTPPNVPHARALAYYDNIICQDDPNAQ
NKLEDPVKAPVPKEDDSLNIHNSLTPKHENHKVLGEENSSEVNSLQNNMM
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaaaggaagcgaggttttgctcgggatgctggaggcaaatgatgctgtcaagc
attctggttctgcacttgattcccttctttgtacatgggaacactctgggggccaatgtc
actgagttggacacagccaacgtgacatccctgcccagtaaggtcgaggaagcggccaaa
gtgaatgatgtcgttatcgaggtgaccggggtcagcggctcagtcagccccgtcgtcacg
gtgacccagagggccggccgcatgccccgctccaaagaggagcagggcagcggcatgctg
ggagaaggggtgttgccagccgagaaggaggtggtggacccgcccaggatcagcctcgac
tcagcagagacagagttcctgctgcctagcaacccccgtggcacggaggaggaagaggat
gaagaggagcacaccgacccaccgtggctgaacgccagagacaacaacgtcgacctggac
cgccgcttcacagaaggagtagccaatctggccaccaccactgcccctccccctgccgcc
gctaacccctctcgcccggacgtcctcaccgtggacttcttcgaccccgcctctcgcggc
cgcggcctggacctagccccgccctctccctcctctttggcccacgagctccagggcggc
gaccccacttcctgggccatgccaaccaactacgactacatcacgccatacgaggagggt
gcgtcgcccacccctgatgagtactcctacaccaccactactgagaccttggatggggat
gacgacttgaggctaactgccgggcctccatcgcgctccaggcccagggctcccccaggt
tccggctccttcaccccagacaagaggctgcccagtgggggtgcagctgctgctccagag
ggccctgcggccgcacctccagcgttacccgtggatggctcagacgggaccggtggctgc
cgccagggctacgtaaagcagaatggaacctgccgctccccctgcgacacactgcccagc
tactgcttcaacggaggccagtgctacctactggacggaatgggggtcttctgcagatgt
aatgtccaggactacatctggcataaaggttcccgctgtgagtcggtggtgacagagttc
caggtgctgtgtctgaccatcggggcgtcggccctcatggtgctgctgctcttcatgatc
atcgtctgcttcgccaagaagcttcacgtgctcaagaccgagaacagcaagctgcgcaaa
cgcagcagtaagtaccggcctccatcggagcagcacaatgataatttctccctgtccacc
atcgctgagggctcccacccaaatgtaaggaaactgtgcgacacccctcctaacgtccct
catgcccgtgctttggcttactatgataacattatctgtcaggatgatcctaatgcccag
aacaagctggaggaccccgtgaaggccccggtgcccaaggaggacgactccctgaacatc
cacaactccctgacccccaaacacgagaaccacaaggtactgggcgaggagaactcctct
gaggtaaactcactgcagaacaacatgatgtag
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