Salmo trutta (river trout): 115179154
Help
Entry
115179154 CDS
T08542
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115179154
Glycosaminoglycan binding proteins [BR:
stru00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
115179154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
DUF4214
Motif
Other DBs
NCBI-GeneID:
115179154
NCBI-ProteinID:
XP_029596323
Ensembl:
ENSSTUG00000049266
LinkDB
All DBs
Position
39:4085208..4118809
Genome browser
AA seq
2248 aa
AA seq
DB search
MPGLTRNCVFWVVSAILLTGYFDTDASHGVAMDSGLVVKHLKSQDPSGISSQLESDEGLE
ALTLKTYKGKGAISRRKRNILFPSGVKLCSQETVDQAIENHLKYFHQRVCQETVWEAFKI
FWDRLPERDEYQAWVNLCQDGAVSVMEIGSNFSRSEEHVSLVRARVVMTAAPNSEPTSSG
SKVCSPTAATPSELATTQKDNEVIVVQPDTFPTMRGDVDVIPVTTAEPAEEVTEMVLPGT
TDYVTEDADIDVTSEIDETIQEIGEDATTEAAFDVNSETAGEVLAENSEEAVQEVNMAAV
KETSDATSDDTVEITPEPIVTVIHEPINEVIEKMVEEVISDTTHNTVEEAEEVPAEVLPE
AAIEIPIEVPSEAAIEIPIEVLSEAAVEVPAEVPSEAAIEIPVGSTDKDIPEPEIKFIPE
TSLEDISETTSGVPSEAATEITSDTLDKEIIEGATETTSDTIDKEIIEGTTEITSDTVDK
EITEGATEITSDTIDKEIIEGATEITSDTIDKEIIEGATETTSDTIDKEITEGATEITSD
TIDKEITEGATEITSDTIDKEITESATEITSDTIDKEITEGATEITSDTIDKEITESATE
ITSDTIDKEITEGATEITSDTIDEEIKEAATEVTSDTIDEEITEGAGEEDVTLETTSDIA
TKATSEDTTDEDIPEDAAELTPDISPEDTSENTDEEAAAELIPEVSPEDTSEPEASMEIP
SEDSDGDVQELPVEVTSRDSDRGVQELPVEVTSGDSDRGVQELPVEVTSEATVNVAPEDT
EEETPEILEEVISDATTHLILEATEEITPETVLEDTLATTTNEVAIEIGPEEEVTPETSV
KAIPEDVTEITSEATIKAEVTPEAEVEMKEVTVEVTSEATLEVTPEVEVEVTPEYLVEEP
TEAEEITEETAVEDNPKVEIEVTPESTEEVPEEAEEVPLETAVEDTPEAVEEITPETVEI
TLEAAEEDTTETVEKIVLVTPEEITPEHSEEEIPEMSEEETPEASEEVPSEAVEEIIPEA
TEEASKKIITETTEEASEEAAAEITTEAAGESTPEATPEAAVEITHEVTTETGILADTEE
NNNGDRYRDAEENNNGDRYRVTEEPEETNDDFQGIQDIITEVENALGNEIEDIMMRPSTL
MKEQVVELSIQLKGENYNDALRDPSSFYYQRLAKHFTHKIEDAFERLPGFKKVFVVEFRP
QKDLQRGMLSVVVHYAVTLEVDGAGISNETMDYINLQSNVVEKSYRDAVERPTVVYTITD
FRNYITEALHKENFMSNTTLDVDPDSLQLERVDHLFLGGRPTTKPEESNDMMDNVLAAEK
PPDAPGQDLDVSDIFLKKDDFLFPVDPLKGSGSVVASENDVFVLDETTLPPSTTAVPAEN
NGNIEEEGFLLSNTQQDSHTPDGDGVVGAGGSSTSSPSQPQTTEAPVPAPPRVDPDLDAG
SGSGFSGDDQGADVFPWFPVTTEETDYIEEEEGEEDSVVGEVHLADPEVEPKEEEKKKEE
EKGEEITESVLTESPEDMGPFESHPESAPVEEEPQRPFLDRLPVTQDISTRPDYTTTAEA
PVFWTAETLTVELSIQTLEASGIYDDYYPSEPFTIIAPVTDYLYPQVYTTEALVLEGPAA
ETHGSVEELSEPTSPIEVELPTVTESPTFIDMELFTVKESIFDMITAEPPEIEAFTNRPL
LLVPDPEDEDGEVEILEEQGAEVAEPLATLLPALDISEEDLAEDEIFVVAAGTAAPEVIE
SHSILSSEKESPFTRISDSVPEEVEATHHPATTEIAPHGDIEISETPEIAPTILPPFFQP
TFRPTENLLEAAEESDVSIEEGDVSMALAPPFPAHDTYELEVSTSIQAVGDYAPDSPMPE
IDLTFDMYDGTSHMDGDSSGYSSIAHGSDMGSIAMAKSPGKDLMVFFSLRVTNMMFSEDL
FNKSSTEYKALEQRFLELLVPYLQSNLSNFQNLEILNFRNGSIVVNSRMKFGKPVSRGVT
NTVYLILEDFANSAFQTMNLSIDKYSLDVESGNQANPCKFQACNEYSMCTVNRWSGEAEC
VCDAGYFSVDGLPCQSICDLQEDFCLNDGKCDVIPGKGAICRCRVGENWWYRGEHCEEYV
SEPLVVGIAIASVAGFLLVASGAIFFLARTLRDGYDKEDSEDPLRDRDSLPSLERATKFN
PMYESDVATAEYYRRYEDDVPHHSTGSADTSVDFCSDEILQIYDNSELTREQIQDRLRII
ELCAKDRQFADFVRQHQVALDRRASSET
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgccggggctaacaaggaactgtgttttttgggttgtgtctgccatccttctgacagga
tactttgacacggatgcttcgcacggggttgctatggatagtggtttggtagtgaaacac
ttgaaatctcaagacccctctgggatttcaagccaactggagtcagatgaaggtctggaa
gctttgaccctcaagacatacaaaggaaagggtgctatttctagaagaaagcggaatatt
ctttttcccagtggagtgaagctttgttctcaagagactgtagaccaagcgatagaaaac
cacctgaagtactttcaccagcgagtgtgtcaggagactgtatgggaggcgttcaagatc
ttctgggaccgtctacctgagagagacgagtaccaggcctgggttaacttatgtcaggat
ggagccgtcagtgtgatggagatcggcagcaacttcagccgatcagaggagcacgtctct
cttgttagggctagagtggtgatgactgctgctccgaatagcgagcccacaagctcaggg
tccaaagtgtgcagtccaaccgcggcaactccatcagaattggccaccacccaaaaagat
aatgaagtcattgtcgtacagccagacaccttcccaaccatgcgaggagatgttgacgtc
attcctgtcactactgcagagccagctgaggaggtaacagagatggtcctgccaggaact
actgactatgtgactgaagatgctgacatcgacgtcacctcagagatcgacgagacaata
caggagataggagaggacgccactaccgaagctgcctttgacgtcaactccgaaacagca
ggtgaagtccttgctgagaatagtgaagaggctgtccaggaggttaatatggctgctgtt
aaggaaacatccgatgctacctcagatgacactgtggagatcacacctgaacctattgtc
actgtcatccacgagcccattaatgaggtaattgagaaaatggttgaggaagtaatctca
gataccacacacaatactgtggaggaggcagaagaggtccctgcagaggtcctaccagaa
gctgccattgagatccctatagaggtcccttcagaagctgccattgagatccctatagag
gtcctatcagaggctgccgttgaggtccctgcagaggtcccttcagaagctgccatcgag
atccctgttgggtccacagacaaggatatcccagaacctgaaataaaatttattccagaa
acttctttggaggacatttctgaaaccacttctggagtgccttcagaggctgccacagaa
atcacttcagataccttagacaaggagatcatagagggtgctacagaaaccacttcagat
accatagacaaggagatcatagagggtactacagaaatcacttcagataccgtagacaag
gagatcacagagggtgctacagaaatcacatcagataccatagacaaggagatcatagag
ggtgccacagaaatcacttcagataccatagacaaggagatcatagagggtgctacagaa
accacttcagataccatagacaaggagatcacagagggtgctacagaaatcacttcagat
accatagacaaggagatcacagagggtgctacagaaatcacttcagataccatagacaag
gagatcacagagagtgctacagaaatcacttcagacaccatagacaaggagatcacagag
ggtgccacagaaatcacttcagataccatagacaaggagatcacagagagtgctacagaa
atcacttcagacaccatagacaaggagatcacagagggtgccacagaaatcacttcagac
accatagatgaggagattaaagaggctgccacagaggtcacttcagataccatagatgag
gagatcacagagggtgctggagaagaagacgttactttggagaccacttcagacattgct
accaaggcaacgtcagaagatactacagatgaggatattccagaggatgcagcagaatta
actccagacatttctccagaggacacttctgagaataccgatgaggaagctgcagcagag
ttgattccagaagtgtctccagaggacacttcagagcctgaagcttccatggagatccct
tctgaggattcagatggagacgttcaggagctccctgtggaggtcacctcacgggattca
gatagaggcgttcaggagctccctgtggaggtcacctcaggggattcagatagaggcgtt
caggagctccctgtggaggtcacctcagaggctacagtgaatgttgccccagaagacact
gaagaggagacccctgagattttagaggaagttatctcagacgccacaacgcatttgata
ctcgaggctacggaggagatcactccagagactgtactagaggatacattggccactact
actaatgaagtggcaatagagattggtcctgaggaagaagtcactccagaaacttcagta
aaggccattccagaggatgtaacagagatcacctcagaagcaacaataaaggctgaagtc
actcctgaggctgaagtagagatgaaggaagttacggtggaggtcacctcagaagccact
ttggaggtcactcctgaggttgaagtagaggtaactccagaatatttagtggaggaacct
acagaggctgaggagattacagaagaaactgcagtagaggacaatcccaaggtggagata
gaggtaactccagagtctactgaagaagttcctgaggaagcagaagaggtccctttggag
actgcagtggaagacactccagaggctgtagaagaaatcaccccagagactgtagagata
actctggaagctgctgaagaagacacaacagaaactgtagaaaaaatagttttagtgact
ccagaagagataacaccagaacattcagaggaggaaattccagaaatgtcagaggaggaa
actccagaggcttcagaagaggtcccatctgaggcagtagaagagatcattccagaagct
acagaagaggcttccaaaaagataattacagaaactacagaagaggcttccgaagaagct
gcagcggagataaccacagaggctgcaggtgagtccactccagaggcgacaccggaggct
gctgtggagattactcatgaggtcaccactgaaactggaattttggcagacacagaggag
aacaataatggcgatcgttatagggatgcagaggagaacaataacggtgatcgttatagg
gtcacagaagaaccagaagaaacaaatgatgacttccaagggattcaagatatcataaca
gaggtggaaaacgcgctgggcaatgagatcgaggacatcatgatgaggccttccacactc
atgaaggagcaggtggtggaactcagcatccagctgaagggagagaactacaacgacgcc
ctgagagacccctctagcttctactaccaacgcttggccaaacatttcacccataagatt
gaagatgcatttgaaaggttaccaggattcaagaaggtctttgtagttgaattcaggcct
cagaaggacctccaaaggggtatgttgtctgtggtagtccactacgcagtgactctggag
gtggacggggcaggcatcagtaacgagaccatggactacatcaacctccagtccaacgtg
gtggagaagtcttaccgtgacgccgttgaacgccccaccgtggtctacaccataacagac
ttccgaaactacatcactgaagccctgcacaaggagaacttcatgagcaacaccactctg
gatgtagaccctgactcactgcagctagagcgagttgatcacttgtttctgggagggaga
cccaccaccaaaccagaagagtccaatgacatgatggacaatgttctggctgctgagaaa
ccaccagatgctcctggccaagacttggatgtcagcgacatcttcctgaagaaggatgat
ttcctgtttcctgtggaccctttgaagggctctgggagcgttgtggccagtgaaaatgat
gtgttcgttctggatgaaaccaccttgccacccagcaccactgctgtccctgcagagaat
aatggaaatattgaagaagagggatttcttctcagcaacactcagcaagactctcatact
cccgatggggatggtgtggtcggtgctggaggctcctctacctcctccccttcacaacca
cagaccacagaggccccggtcccggcacctcccagagtagacccagatttggatgctggc
tctggctccggcttctctggggatgaccaaggggctgatgtcttcccatggtttcccgtg
acaactgaggagacggactacatagaggaggaggagggggaggaggattctgtggtgggg
gaggtgcatttagcagatccagaagtggaaccgaaggaggaagagaagaagaaggaggag
gagaagggagaagagatcaccgaatctgtcctgactgaatctccagaggatatgggtcct
tttgagtcccatccagaatcagccccagttgaggaagagccacaacggcctttcttggac
agactgcctgtgacccaagacattagtacccgacctgactacacgaccaccgctgaagcc
cctgtgttctggactgcagagaccctgaccgtggagctctccatacagacgctggaggcc
tctgggatatatgacgattattacccaagcgaaccattcaccatcatagcaccagtcact
gattatctctatcctcaggtttacaccactgaggccctcgtgttggaagggccagcagct
gagacccatggttctgttgaggagctgtcggagccaaccagtccaatagaggttgaactc
cccacagtcacagagtcacctaccttcatagacatggagctgttcacagtcaaggagtcc
atcttcgatatgatcaccgccgaaccaccagagatcgaagccttcaccaacagaccttta
ctcttggtgcccgatcctgaggatgaagacggagaggtggagatcttggaggaacagggg
gcggaggtcgcagagcccttggccacactactcccagcccttgacatctcagaggaggac
ctagctgaagatgaaatatttgttgtggctgcaggtacagcagccccggaagtcatagag
tctcatagcatcttatcctccgagaaggaatctcccttcactcgtatatctgactctgta
ccggaagaggtggaagccacacaccatccagccaccaccgaaatagcaccacatggtgac
attgaaatctctgagacaccagaaattgccccaacaatcctacctccatttttccagccc
acattcagacccacagaaaacctgcttgaggcagcagaagagtcagatgttagcattgaa
gaaggagatgttagcatggcgctagcaccccctttcccagctcacgacacatacgaacta
gaggtcagcacttcaatccaagctgttggagactacgcaccagactcccccatgccggaa
attgacctcaccttcgacatgtatgacggaacgagtcacatggacggggacagcagcggg
tactccagcatcgcccacggatcagacatgggcagcatcgccatggcaaagagccctggc
aaggatctgatggtgttcttcagcctgagggtgaccaacatgatgttctctgaggacctc
ttcaacaagagttccacagagtacaaagccctggagcagaggttcctcgaactgctcgtc
ccttacctgcagtccaacctcagcaacttccagaatctggagatcctgaatttccgtaac
ggcagcatcgtggtgaacagcaggatgaagttcgggaagcccgtctctcggggggtcacc
aacactgtctaccttatcctagaggacttcgctaactcagccttccaaaccatgaacctc
tccatagacaaatactcactggatgtggaatcaggcaaccaggcaaacccctgcaagttc
caagcgtgtaatgagtattcgatgtgcacggtgaaccgctggtccggggaggcggagtgt
gtgtgtgacgcgggttacttcagtgtggacggactgccgtgccagagtatctgtgacctg
caggaggacttctgtctcaacgatgggaagtgtgacgtcatccccggcaagggagccatc
tgcagatgtcgtgtaggagagaattggtggtaccgcggggaacactgtgaggagtatgtg
tcagaacctctggtggtgggcatcgctatagcgtcggtggctggcttcctattggtggcc
tctggggcaatcttcttcctggccaggactctgagggacggttatgacaaggaggattca
gaggatcctctacgagatcgagacagtttgccatccttagagagagccaccaagttcaac
cccatgtatgagagtgatgtggccacggcagagtactacagacggtacgaagacgacgtg
ccgcaccacagtacgggcagcgcagacacctctgtggacttctgcagtgacgagatactc
caaatctacgacaactccgagctcaccagagagcaaattcaggaccgcctaaggataatt
gagctgtgtgccaaagaccgtcagtttgcagactttgtacggcagcatcaagtagcgctg
gacagaagagcgagctctgaaacatag
DBGET
integrated database retrieval system
