Salmo trutta (river trout): 115179166
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Entry
115179166 CDS
T08542
Symbol
ncam2
Name
(RefSeq) neural cell adhesion molecule 2 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
stru
Salmo trutta (river trout)
Pathway
stru03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
stru04514
Cell adhesion molecule (CAM) interaction
stru04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
115179166 (ncam2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115179166 (ncam2)
04517 IgSF CAM signaling
115179166 (ncam2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115179166 (ncam2)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115179166 (ncam2)
04090 CD molecules [BR:
stru04090
]
115179166 (ncam2)
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115179166 (ncam2)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
115179166 (ncam2)
04091 Lectins [BR:
stru04091
]
115179166 (ncam2)
Membrane trafficking [BR:
stru04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
115179166 (ncam2)
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
NCAM1/2
115179166 (ncam2)
CD molecules [BR:
stru04090
]
Proteins
115179166 (ncam2)
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
115179166 (ncam2)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
stru00537
]
Others
115179166 (ncam2)
Lectins [BR:
stru04091
]
I-type lectins (Siglecs)
115179166 (ncam2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
Ig_PDGFR_d4
C2-set_2
Ig_6
Fn3_ROS1
Pur_ac_phosph_N
Ig_MYOM1
Izumo-Ig
Adeno_E3_CR1
C2-set_3
F22D3_4_N
Motif
Other DBs
NCBI-GeneID:
115179166
NCBI-ProteinID:
XP_029596381
Ensembl:
ENSSTUG00000048710
LinkDB
All DBs
Position
39:complement(23347445..23755102)
Genome browser
AA seq
839 aa
AA seq
DB search
MILQLLWFLVCGSQAVLQVSISLNKVELSVGESKFFKCTVIGEPVKLEWFNPQGERIVSS
QRVALHTGEDSSRLTIYNAVVEDAGIYRCQTTDAQGQTQEATMVLEMYQKLTFRDVRSPQ
EFRHGEAAEVVCDVIASPAPAVSWFYQKGFKSMEITEEHYSRFQVLPNNNLQIHKVTKAD
EGVYRCEARVEARGEIDFVDIEVVVNVPPVLSMLQQSFNATADYQESVTFTCVTSGSPDP
EVTWHRKGQQLERSEQYVLNTMEGGRSTLTIRNIIQGDGGGYTCRATNKAGVEERELFLK
VFVQPHITQLRNVTAVEGSAAMISCVAEGEPLPEISWRRANDGRSFTDGDKSQDGRMDVR
GRHGKSMLTISGVKLTDLGRFDCEALSRIGGHQKSMFLDIEYMPKFQTNQTIFYSWEGNP
VNISCDVKSNPPATMLWRRERLTISAEGTANTRVHTIDGKSLLEVTPVSDRDFGRYNCTA
RNNIGAKYQEFILAQADVPSNPYSVRLSAVSQRIATVTFMKPDSHGGVPIGHYLVNYKEV
GSQDWRDVKSHGVQTIVLLTGLEPNTTYEVRVAAVNGKGQGEFSHTESFQTLPIREPSPP
AVHGQRGMGKAYRLGLVKQDDGGMPIVEYIVKYKTDKEEQWMTKLVSGQQDFALLQPLQW
NTRYEVEITARNIKGLSEPTFYQFFMPQKPDIIADSLFSGLGLGPVVGLGLVGLLLVLVV
VDVSCYFLRQCGLLMCITRKLCSKKMATSGKSKEMEEGKAAYLGDGSKDPIVEMRTEEER
ITNHDGSPVHEPNETTPLTEPEKLPLKEENGKETLKPDMIEIKVHSDNSIHTKQDDSKA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgattctccaactcctatggtttcttgtctgcggcagtcaagctgttctgcaggtgtcc
atatccttgaacaaggtggagctaagtgtgggagagtccaagttcttcaaatgcacagtg
atcggcgagccagtgaagttggagtggtttaacccccagggggagcgcatcgtgtcgtcc
cagcgtgtggccctgcacaccggggaggacagctccaggctgaccatctacaacgctgta
gtggaggacgctggcatctaccgctgccagaccaccgatgcccagggacagacacaggag
gccaccatggtgctggagatgtaccagaagctgacattccgcgacgtgaggtccccccag
gagttccgtcacggcgaggcggcagaggtggtgtgtgacgtcatcgcctcgccggcacct
gcggtctcttggttctaccaaaagggcttcaagagcatggagatcactgaggagcactac
agcaggttccaggtgctgcccaacaacaacctgcagatccacaaggtgaccaaggcggac
gagggcgtgtaccgctgcgaagcgcgagtggaggcccgcggcgagatcgactttgttgac
atcgaggtagtggtgaatgttcctcctgtgctgtcgatgctacagcagtcattcaatgcc
acagcagattaccaggagtcagtgactttcacctgcgtcacatcgggatcccccgaccct
gaggtcacctggcacaggaagggccagcagttggagaggtcggagcagtatgtcctcaac
accatggagggaggcaggagtaccctgaccatccgcaacatcatccaaggggatgggggc
ggctatacctgccgagccaccaacaaggccggggtggaggagagggagctcttcctcaaa
gtgttcgtccagccacacatcacccagctgcgtaacgtgacggcggtagagggcagcgcc
gccatgatctcctgcgtggccgagggggagccactgcctgagatctcctggaggagagcc
aacgatggtcggagcttcaccgacggagacaagagccaagatggacgtatggatgtgcgg
ggccgccatggcaagtccatgttgaccatcagtggggtgaagcttactgacttgggccgt
tttgactgtgaggccctcagcaggatcgggggccaccaaaagagcatgttcctcgatata
gagtacatgcccaagttccagaccaaccaaaccatcttttactcgtgggagggcaacccg
gtgaacatcagctgtgacgtcaagtccaacccgcccgccaccatgctatggaggagagag
cgcctcaccatctcggccgaaggcactgccaacacacgtgtccacacaatcgacggcaag
tccctgctagaggtcaccccggtgtccgacagggatttcggacgctacaactgcacggca
cgtaacaacatcggagcgaaataccaggagtttatcttggcccaggcagacgtgccctcg
aacccgtactcggtgcgcttgtcggccgtgtcgcagcgcatcgccacggtgacattcatg
aaacccgactcacatggcggtgtacccattggccactacctggtcaactacaaggaagtg
ggctcgcaggactggagagacgtcaagtctcatggtgtccagacgatagtactgctgaca
ggcctagagcccaacaccacctacgaagtgcgagtggctgcagtcaatgggaagggccag
ggagagttcagccacacggagtccttccagactctacccatacgtgagcccagccccccg
gcagtgcatggccagagagggatggggaaggcctaccggctgggccttgtcaagcaagac
gacgggggcatgcccatcgtggagtacattgtcaagtacaagacagacaaggaggagcag
tggatgacgaagctggtttcggggcagcaagactttgccctgctgcagccgctgcagtgg
aacacgcgctacgaggtggagatcacggctcgcaacatcaagggcctctcggagcccacc
ttttaccagttcttcatgccccagaaaccagacatcatagcagactccctgttcagcggc
ctggggctggggcctgtcgtgggcctgggcctggtcggcctcctcctggtcctcgtggtg
gttgacgtcagctgctacttcctgcgccagtgcggcctgctcatgtgtatcacgcgcaag
ctctgcagcaagaagatggccaccagcggcaagagcaaggagatggaggagggcaaggcc
gcctacctgggcgatgggtccaaggatcctatcgttgagatgagaacggaagaggagaga
ataactaaccacgatgggagcccagtgcacgaacccaacgagactacacctctcacagag
cctgagaagctaccgctgaaggaggagaacgggaaggagacgctgaagcccgacatgatc
gagatcaaagtgcacagtgacaacagcatccacacaaagcaagacgacagtaaagcataa
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integrated database retrieval system
