Salmo trutta (river trout): 115179184
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Entry
115179184 CDS
T08542
Name
(RefSeq) integrin alpha-4-like isoform X1
KO
K06483
integrin alpha 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04514
Cell adhesion molecules
stru04672
Intestinal immune network for IgA production
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115179184
04514 Cell adhesion molecules
115179184
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115179184
09142 Cell motility
04820 Cytoskeleton in muscle cells
115179184
04810 Regulation of actin cytoskeleton
115179184
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115179184
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115179184
04515 Cell adhesion molecules [BR:
stru04515
]
115179184
04090 CD molecules [BR:
stru04090
]
115179184
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115179184
Exosomal proteins of other cancer cells
115179184
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115179184
CD molecules [BR:
stru04090
]
Proteins
115179184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF5370
Motif
Other DBs
NCBI-GeneID:
115179184
NCBI-ProteinID:
XP_029596404
Ensembl:
ENSSTUG00000039453
UniProt:
A0A674D1Q0
LinkDB
All DBs
Position
39:24835588..24861526
Genome browser
AA seq
1082 aa
AA seq
DB search
MTTFGLGLYSIGLNMLFCFLLRHADSYNLDISHAIPLSGPNGSFFGYSVLLHKHQQQTWV
IVGAPVANSKFNQAVRNPGAIYKCKITDKKDCEQIQLGVMSDMPCGRHCSAEVENQWLGV
SLSRREQDGLVLACGHRWKNVFFTKKDDLYKLPHGVCYKLESDLNQSSPLIPCYRDHQKQ
FDNDYASCQAGISNVLIGDLIVMGAPGTFYWTGSVFVHNISSQVTSAYLDDNVVLYGSYL
GYSVSAGHFLHPDSTEVVGGAPQYGQTGRAYIFSIESSTLSIISEVKGQKLGSYFGATVC
AVDLNTDGLSDLLVGAPMFSAVREEGRVHIYMNQGQANMKEMEFTLAGKDSYAARFGESI
TSLGDIDGDGYPDVAVGAPQEDDLHGAIYIYNGRKTGLERYFSQRIAGSVLGSAFKMFGQ
SVSGGIDVDENDYPDVAVGAFLSDSAVVLRSRAVVVVEATILLPPSVNRTHALCTENGQP
AICLKTTVCFQLHTQRVSGLIEILYNLTADVKHIEGLQSRFFFTTNGTALSNATAGSIKT
RHGNMTCVTHLAFLRRDIRDIFTPIHFELQYELGKHNVVRGNSESFPSLRPMLQRGGKYS
NLLTNKTVFTRYCAWANCSTNLQVSAQLLLPRTHRDMPYVALGEGKTILLNVTLSNAGDA
AFLPMLHLRYPRNLYFIKVLDAEEKYVSCKIAEEEKTSVGLDCSVGNLFFNALAKVNISF
LLDVSADSEPGDLNIIINATRENFENEDLLHDNIVNLTLLLRYGVNLNIHGFVSRTDFVF
GDFEDPHCSTERFNYTFKVVNVGPSISHGTRVEIDIPKALAPYPYRLLNILDIQSSSGWC
YIQNSTDGTSSTHGNMYGSQRASTIDSVWLNVTTTTDSYWMNSSSTTHPYWTNTSSTTDT
NWTSTSYWANVRNWTSVIEDECDLPDSNPLNELFFFFFSKRSRRHMYCMKEDALCLYAVC
ELGDMDIGKDVTIEMEVEMNSGVLDISPGRHGVMLLETTAVISPKKDPFIWFLKEDPITV
VVLEAHHSHKLKPVIGLFIIVASLFLGILILALLVICMWKSGFFKSKYEEKMANIRRHSW
DY
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgactacattcgggctagggttatacagcatagggctaaacatgctgttttgctttctc
ttacgtcatgccgattcgtacaatttagacatatcgcacgctattccactcagtggtccg
aacggatcattttttggatattctgtgttgctccacaagcatcagcaacagacatgggta
atagttggcgcaccagttgcaaattcaaagttcaaccaggctgtcaggaatcctggagca
atctacaagtgcaaaattacagacaagaaggactgtgaacagattcaactgggtgtaatg
agtgacatgccctgtggcagacactgttctgctgaggttgaaaaccagtggcttggtgtg
agcctctccaggcgggagcaggatggacttgtgttggcctgtggacatcgttggaaaaat
gtcttcttcaccaaaaaagacgatctatataagttgccacatggcgtatgctacaaattg
gagtcggacttgaatcaatcaagtcctttgattccatgctacagagatcaccaaaaacag
tttgacaatgactatgcatcatgtcaagcagggatttcaaatgtccttattggggacctc
atagtaatgggagcccctggaaccttctattggactgggtctgtttttgtccacaacata
tccagccaggtcacttctgcctacttggatgataacgttgtcctctatggaagttatttg
gggtactcagtcagcgctggccacttcctgcacccagactccactgaggtagtgggagga
gccccccagtatgggcagactggtagagcctacatttttagcatagagtccagcacactg
agcatcatctctgaggtcaaaggacaaaagctgggttcctattttggggccactgtgtgt
gcggtggacctgaacactgatggcctgtctgacctgctggtgggagctccaatgttcagc
gccgtgagggaggagggccgtgtgcacatctacatgaaccagggacaggctaacatgaag
gagatggagtttacattagcagggaaagattcatatgcagcccggtttggggaaagtatc
acaagtcttggagatattgatggtgatggctatccagatgttgcagttggggcaccacaa
gaggatgacctacatggtgctatttatatctataatgggaggaagacgggacttgaacga
tacttttctcaaaggattgctgggtctgttttgggtagtgctttcaagatgtttggccag
tctgtgtcggggggcattgatgttgatgaaaacgattacccagatgtggccgtgggagcc
tttctgtccgactctgctgttgttctgaggtcacgggcggttgttgtggtggaggcgacg
atacttcttcctcctagtgtgaaccgcacccatgccctgtgtacagagaacggccagcct
gccatttgcctcaaaaccactgtgtgcttccagttgcacacgcaacgtgtctctgggctc
atcgaaatactttacaacctgacggctgatgtcaagcacatagaggggctccagtccaga
ttcttcttcaccaccaatggcacagcgttatcaaatgccacagcaggcagcatcaagacc
aggcatggcaacatgacctgtgttacccacctggcctttctgaggagagacattcgggac
atcttcaccccaatccactttgagctgcagtatgagctgggaaagcacaatgtggtgagg
ggtaactccgagagctttccctctctcaggcctatgctccaaaggggagggaagtacagc
aacttgctgaccaacaagactgtattcaccaggtactgtgcctgggccaactgttccacc
aatctgcaagtgtctgcacagctgctgttaccgaggacacacagagacatgccatacgtt
gccctgggggaggggaagaccattctactgaacgttacactgtccaatgctggcgacgct
gccttcctccccatgcttcacctgagataccccagaaatctctacttcatcaaagtgttg
gacgctgaggagaaatatgtgagctgtaaaatcgcagaggaagagaagacaagtgtcggg
ctagattgcagcgtgggaaatttgtttttcaacgccttagccaaagttaatatcagtttt
ctactggatgtcagtgctgacagtgaacctggtgacctgaacattataatcaatgcaacc
cgggagaattttgaaaatgaagatcttctccatgacaatattgttaatctgactctgcta
ttgagatatggagtgaatctaaacatccacggttttgtatcccgaacagattttgtgttt
ggggactttgaggatccacactgctccactgagaggttcaactacactttcaaggttgtc
aatgttggtccaagcatatctcacggcacaagagtggaaattgatatccccaaagcttta
gcaccgtatccatacagactgctcaacattttggacatacagtcatcttctgggtggtgt
tacattcaaaactccactgatgggaccagcagtacacatggcaacatgtatggaagccag
agggccagtaccattgacagtgtttggttaaatgtgacaactaccactgacagctattgg
atgaatagctccagcaccactcacccttattggactaatacttccagtaccactgacacc
aattggactagtacatcctattgggccaatgtcagaaactggaccagtgttattgaggat
gagtgtgatctgcctgactccaatcccttgaatgaacttttcttcttcttcttctcgaaa
agaagtagaagacatatgtactgtatgaaagaggatgctctctgtctgtacgcggtgtgt
gagcttggagacatggacattgggaaagatgtcaccattgaaatggaggtcgaaatgaat
tcgggagttttagacatctcaccgggaagacatggtgtcatgctgttagagaccactgct
gtcatatcacccaagaaggacccatttatttggttcttaaaagaagaccccattacagtg
gttgtcctggaagcccatcatagccacaaactgaaaccagtcattgggctgttcatcatc
gtggccagtctcttcctaggcatcctcatccttgccttgctggtcatctgcatgtggaag
agtggcttctttaagagtaagtatgaggaaaagatggcgaatatacgaaggcacagctgg
gactactga
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