Salmo trutta (river trout): 115179195
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Entry
115179195 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115179195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115179195
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115179195
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115179195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115179195
NCBI-ProteinID:
XP_029596423
Ensembl:
ENSSTUG00000039516
UniProt:
A0A674D2X9
LinkDB
All DBs
Position
39:14826536..14886757
Genome browser
AA seq
685 aa
AA seq
DB search
MDALESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCASNEPVQSIGAFQCPTCR
YVISLSPQRGLEGLKRNVTLQNIIARVQRATSSGPLALLPQSGPNSPSEDAGRFALALVP
ASTAMTSPGTPPSHVQCQFCEQDPPQNAVKTCVTCEVSYCDECLRATHPNKKPFTGHRLI
EPMPDCHLRGLQCLEHEEEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALSDRFEKLKQA
LDSNLSHLVKRNNELEGLMGKLIQTCQHVEVNASRQEGKLMEECDLLIDIIQQRRQIIGT
KIKEGKAVRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSITERVSMA
TASSQVLIPEINLTDTFDTFALDFTKEKKLLESLDYLTAPSPPGIREELCTASYDTITVH
WTSDDEFTVLSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFI
VKAINQAGARSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHGQERF
TSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRCNN
SWVVRHNSKELAIEPSPHLRRVGVLLDYDAGSLTFYDAVGSQHLHTFHVSFAQPVCPVFN
VWNKCLTVLTGLPIPEHLEGLETQD
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgctggagtcagagctgacttgcccaatctgcctcgagctctttgaggaccca
ctgctcctgccctgtgcccacagcctgtgcttcggctgcgcccatcgcatcctggtatcc
cactgcgcctccaacgagcccgtccagtccatcggagcattccagtgccccacctgccgc
tatgtcatctctctcagtcctcagcgtggcctagaaggactgaaacgcaacgtcaccctc
cagaacatcatcgcccgcgtccagagggccacctcctccggccccctggccctgctgccc
cagagcgggcccaactcccctagcgaggacgctgggcgatttgcccttgccctggtcccc
gcctccaccgccatgaccagccccgggacgccgcccagccacgtgcagtgccagttctgc
gagcaggacccgccgcagaatgctgtcaagacgtgcgtgacgtgcgaggtgtcatactgt
gacgagtgcctgcgcgccacgcaccccaacaagaagcccttcacgggccaccgtctgatt
gagcccatgccagactgccacctgcgggggctgcagtgcctggagcacgaggaggaaaaa
gtgaacatgtattgcgtcaccgacgaacagctcatctgctcgctgtgcaaactggtgggt
agacaccgagaccaccaggtggcggccttgagcgaccgcttcgagaaactcaagcaagcg
ttggattccaacctgagtcatttggtcaagaggaacaatgagttggaggggttgatggga
aagttgatccaaacctgtcaacatgtagaggtcaatgcatcacggcaggagggaaagctg
atggaagaatgcgacctcctgattgatatcatccagcaaaggagacagatcattgggacc
aaaatcaaggagggaaaggcagtccggatcaggaagctagcccagcagatctccaactgt
aagcagtgcatcgagaggtcctctgccctcatcacccaggccgatcagaccctgaaggag
acggaccacgcccgattcctccagaccgccaagagtatcaccgaaagggtttccatggcg
accgcctcctctcaggtcctgattccagagatcaacctgacggacacgtttgacacgttc
gctctggacttcaccaaggagaagaagctgctggagagcctggactacctcacagcacca
agtcctccgggcataagagaagagctctgcactgcatcgtacgacaccatcaccgtccat
tggacctcagacgacgagttcacagtgctttcctatgagcttcagtatgctatcttcaca
gggcaagccaacgttgtcagcctgtgtaactcagcagacagctggatgattgtgcctaac
atcaagcagaaccactacaccgtccacggcctgcagagtggcaccaagtacatcttcatc
gtcaaagccatcaaccaggcaggtgcccgcagcagtgagccagggacactcaaaaccaac
agccaaccattcaagctggaccccaagtccgcccacaagaagctgaaggtctcccatgac
aacctgacggtggagcgtgacgagacgacatcgaagaagggacacggccaggaacgcttc
accagccagagtagctacggagtcgtcggtaacgtttacatcgacagcggacgccactac
tgggaggccctgattggaggaagcacatggtatgcggtgggcatcgcctacaagtcggcc
cccaagcacgagtggatcggcaagaactcggcctcctgggtcctgtgccgctgcaacaac
tcgtgggtggtgcgtcacaacagcaaggagctggccatcgagccttcaccccacctgcgc
cgcgtgggtgtcctgctggactacgacgccggctcgcttaccttctacgacgccgtgggc
tcgcagcacctgcacacgttccacgtgtccttcgcccagcccgtgtgccccgtcttcaac
gtgtggaacaagtgtctgactgtcctcacgggtctgcctatccctgaacacctagaaggg
ttggaaacccaggactga
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