Salmo trutta (river trout): 115179313
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Entry
115179313 CDS
T08542
Name
(RefSeq) desmin-like
KO
K07610
desmin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04519
Cadherin signaling
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
115179313
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115179313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115179313
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
115179313
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF8429
ZK652
KIF21A_4th
ANG-1
CLIP1
Mua
DUF1664
COLEC12
TolA_bind_tri
DUF7491
CCDC89
WXG100
CCDC192
Ninein_long_CC
DUF7432
CENP-F_leu_zip
GeBP-like_DBD
Motif
Other DBs
NCBI-GeneID:
115179313
NCBI-ProteinID:
XP_029596575
LinkDB
All DBs
Position
39:17627780..17633884
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AA seq
484 aa
AA seq
DB search
MSSYRSSAQSAQSGSSSYRRTFGAGYSPAMSHSLYSSRGSGGGLGLGHGGSGHISSRVYE
VTKTSASPSYSGYRTSSHFGGPVMSSTAHGSRSYAGMGETLDFSLADALNQEFLHTRTNE
KVELQHLNDRFASYIEKVRFLEQQNATLVVEIERLRGREPTRIADLYEEEMRDLRRQVET
LTNQRSRVEVERDNLGEDLDKLKLRLQEEILQREDAENNLAAFRADVDAATLARLDLERR
VETLQEEIAFLKKIHEEEIREMQSQMQETQVQIQMDMSKPDLTAALRDIRAQYEGIAAKN
ISEAEEWYKSKVTDLNQAVNKNNEALKEAKMETMEFRHQLQSYTCEIDSLKGTNESLMRQ
MREMEERHGREAGGYQDTISRLEAEIANMKDEMARHLREYQDLLNVKMALDVEIATYRKL
LEGEESRISLPIQNYSTMTFRETSPERHHRVAESHSKKSVLIKTIETRDGEVVSESTQHQ
QDIM
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctaccgctcttctgcccagtcggcccagtctggctcctcctcctaccgccgc
acctttggcgcagggtacagccctgccatgtcccattccctctacagcagccggggctcg
ggcggggggctcggactcggacatggcggctccgggcacatctcctcccgggtctacgaa
gtcaccaagacctccgcctcgccctcttactccggctaccgcacctcgtctcacttcggc
ggacctgtgatgtcatcgaccgcacacggttcgcggtcctacgcggggatgggggagacg
ctggacttcagcctggccgacgcgctgaaccaggagttcctccacacgcgcaccaacgag
aaggtcgagctgcagcacctgaacgaccgcttcgccagctacatcgagaaggttcgcttc
ctggagcagcagaacgctacgttggtggtggagattgagaggctgcgggggcgtgaaccc
acacgcatcgccgacctgtacgaagaggagatgagggacctgcgtcgccaggtggagacc
ttgaccaatcagaggagccgcgtcgaggtggagagggacaacctgggcgaagacttggac
aaactcaaactcagactgcaggaagagatccttcagagggaggacgcagagaacaacctg
gctgctttcagagctgatgttgatgctgccactctggcccgtctagacttggagagacgc
gtcgagacgctacaggaggagatcgccttcctcaagaagattcacgaggaggagatccgt
gagatgcagtcccagatgcaggagacccaggtgcagatccagatggacatgtccaagccg
gacctgacagctgccctcagggacatcagggcccagtacgagggcatcgccgccaagaac
atctcggaggccgaggagtggtacaagtctaaggtgacagacctgaaccaggcggtgaac
aagaacaatgaggctctgaaagaggccaagatggagaccatggagttcagacaccagctc
cagtcctacacctgtgagattgactcacttaaaggcaccaacgagtctctgatgaggcag
atgagagagatggaggagcgccacgggcgggaggccggcgggtaccaggacaccatctct
cgtctggaggctgagatcgccaacatgaaggatgagatggccaggcacctgagagagtac
caggacctgctcaacgtcaagatggccctggacgtagagatagcaacctacaggaaactg
ctggagggagaggagagcaggatttccctgcccatacagaactattccaccatgactttc
cgtgaaacgagcccagagcgtcatcaccgcgttgctgagtcacactcaaagaaaagtgtc
cttatcaagaccatcgagacccgtgacggagaggtggtctctgagtcaacacagcaccag
caggacatcatgtaa
DBGET
integrated database retrieval system