Salmo trutta (river trout): 115179365
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Entry
115179365 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115179365
04082 Neuroactive ligand signaling
115179365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115179365
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115179365
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
115179365
NCBI-ProteinID:
XP_029596663
Ensembl:
ENSSTUG00000039592
LinkDB
All DBs
Position
39:complement(16167546..16225981)
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AA seq
539 aa
AA seq
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MEPDETHRGMNMYLWWILLHGFWSVYGELPFIADNNAAMLVNWNAVDGNKKLFAIYDTSV
NEPGNMSFVKETVDKLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMYF
QQYWRDKRLAYLGIPLNLTLDNRVADSLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGT
VLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDNAVTGVTRIEL
PQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWIN
YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVMVFLALLEYAFVN
YIFFGRGPQMQKKLAEKAERANNERAAKYDTNRSPQEGGKTSSLKLTKQPNRAKTLRVSQ
SAESHGNILLTTLEIHNEVAGNEVTTSLADSRNSSVMGFDNTSTGTGVQCRKASRASVPR
HSFDRHAQLKRHKLRRRSSQLKIKIPDLTDVNAIDRWSRIIFPSVFSLFNLIYWMYYVN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgatgagactcatagagggatgaacatgtacctttggtggattttactgcac
ggattttggagcgtttatggggaacttccattcattgcagacaataacgcagccatgttg
gttaactggaatgcagtcgatggaaacaagaagttgtttgcaatctatgataccagcgtg
aatgaaccagggaacatgtcgtttgtgaaagagacggtggacaaactactaaagggatat
gatattcgtcttcgaccagactttggaggggcccctgttgcagttggcatgagtatagat
gtggcgagcatagacatggtatccgaagtcaacatggactacactttaaccatgtacttc
cagcagtactggagggacaagaggctggcgtacttagggatcccactgaacctcaccctg
gataaccgggtagcagattcactctgggtccctgacacctacttcctgaacgacaagaag
tccttcgtccacggtgtgacggtcaagaaccgcatgatccgcctccacccggatggaaca
gtgctctacggcctgaggatcacaacgacggcagcctgtatgatggacctgaggaggtac
cctctggatgagcagaactgcactctggagatcgagagctatggatacacgacagatgac
attgagttctactggaagggaggagacaatgcggtgacgggggtaacacgcattgagctg
ccacagttctccatagtggactacaagctggtatccagaaatgttgtcttttccacaggt
gcctacccacgactgtctttgagcttcaagctaaagaggaacatcggctactttatcctg
cagacctacatgccctctatcctgatcaccatcttgtcctgggtctccttctggatcaat
tacgatgcctcggctgcaagagtggcattagggatcaccactgtgctcaccatgaccacc
atcaacacccatctgagagagacgctccccaagatcccctacgtcaaggccatcgacatg
tatctgatgggctgcttcgtcatggtcttcctggccctgctggagtacgccttcgtcaac
tacatcttcttcggccgaggaccacaaatgcagaagaagctggcagagaaagccgagagg
gccaacaacgagagggcggccaaatacgacaccaatcggtctcctcaggaaggaggtaaa
acgtcatctcttaagctgactaagcagcctaatagagcaaaaacgctccgtgtctcacag
tcggcggagtcccacggtaatatcctgctgaccaccctggagatccacaacgaggtggca
ggaaatgaggtcaccaccagcctggcggacagcaggaactcctccgtcatgggatttgac
aacaccagcacaggtaccggcgtccagtgcaggaaggcgagccgggcctcggttcctcgc
cacagctttgacaggcacgcccagctcaagaggcacaaactgcggcggcgctcgtcgcag
ctcaaaatcaaaatccctgacctgacggacgtaaacgccatcgacaggtggtcgcggatt
atcttcccctccgttttctccctctttaatttaatctactggatgtattatgtcaactga
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