Salmo trutta (river trout): 115179366
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Entry
115179366 CDS
T08542
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
stru04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115179366
04082 Neuroactive ligand signaling
115179366
04519 Cadherin signaling
115179366
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115179366
Ion channels [BR:
stru04040
]
Ligand-gated channels
GABA-A
115179366
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
115179366
NCBI-ProteinID:
XP_029596666
LinkDB
All DBs
Position
39:16197795..16231174
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AA seq
471 aa
AA seq
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MMALSTDIEDRTPIFSTMKHVWISVLLVCITCHVGLGQTTAEALKEAEANDNITIFTRIL
DGLLDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKG
PMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAEC
PMQLEDFPMDAHACPLKFGSYAYPVSEVVYLWQTGAAHSVVVAEDGSRLNQYHLIGQTAG
SEDIYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFG
VTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDG
KKAMEAQHPKKRDPMVLSKKPNNVCTAGVNYTPNITKDISISTISNSTSIQLRSSEAEVL
DPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGVNILAPT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctttctacagacatagaggacagaactcccatcttttctacaatgaaacac
gtgtggatctctgtcttgctggtgtgtattacatgtcacgtgggtcttggccagaccaca
gcagaggcattgaaagaggcagaggctaatgacaacatcaccatcttcacacggatactg
gacggactgctggacggctacgacaacagactcagaccaggacttggagaaaaggtcacg
gagatcaaaaccaatatatttgtcacaagctttggcccagtttcagatactgaaatggaa
tacaccattgatgtttttttccgacaaagctggaaagatgagcgcctgtgtttcaaagga
cccatggagatgctgcctctgaacaacctcctggccagtaacatctggaccccagacaca
ttcttcctcaacgggaaaaagtctatcgcccacaacatgaccacacccaacaagctactg
agactgaaggatgacgggacgctgctctacactatgaggttaaccatatcggcggagtgt
cccatgcagttggaggacttcccaatggatgctcatgcttgccctttgaagtttggaagc
tatgcctatccagtctctgaggtggtgtacctctggcaaactggtgctgcccactctgta
gtggtggcagaagacggatcccgtctcaaccagtaccacctgattggccagaccgcaggc
tctgaggacatctacaccagtcgaggacagtacacagtcatgatgtgtcacttctacctg
aagaggaagattggttactttgtcattcagacctacatgccctgcttcatgaccgtgatc
ctgtcccaggtgtccttctggctcaaccgtgaatctgtaccagccaggaccgtctttggt
gtcactacagtgctgactatgactactctcagtatcagcgctcgcaactcgctgcctaag
gtggcctacgccacagccatggattggttcatcgctgtgtgctatgcgttcgtcttctcc
gcgcttatcgagtttgccaccgtcaactatttcaccaagaggagctgggcgtgggatggc
aagaaggccatggaggctcagcacccaaagaaaagggaccctatggtgctttctaagaag
cccaacaacgtctgtacagcaggagtgaactacacccccaacatcactaaggatatctct
atctccaccatctccaacagcacctccatacaactaagatcgtctgaagcagaagtcctg
gaccccaagaaaacctacaacagcgtgagcaaaatcgacaaaatgtcccggattgttttc
cctgtcctatttggaacctttaacctagtgtactgggctacttacctcaacagagaaccg
gtcatcaaaggagtcaacatattggctccaacatag
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