Salmo trutta (river trout): 115179421
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Entry
115179421 CDS
T08542
Name
(RefSeq) eukaryotic translation initiation factor 5B-like isoform X1
KO
K03243
translation initiation factor 5B
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
stru03012
]
115179421
Translation factors [BR:
stru03012
]
Eukaryotic type
Initiation factors
eIF-5
115179421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
GTP_EFTU_D2
ATP_bind_1
Roc
Sec23_helical
Motif
Other DBs
NCBI-GeneID:
115179421
NCBI-ProteinID:
XP_029596784
LinkDB
All DBs
Position
39:complement(7494488..7513937)
Genome browser
AA seq
1303 aa
AA seq
DB search
MGKKQKKSGDDSAKDDGIDLDALAAEIEGAGASKEQGKGKAKKKKDKKKDDFDEDDILKE
LEELSLETTGAKGSKKPDATDEPESAAEPPPPTKAEKKKTRKGKRASLEDDDGDDEEVSG
TGDVENGDKQKDKKTSAAPAAAAAAGSDSEDDASRTRRKPKAGKKGGCKEASDEEEEDDD
GGARKGEGGGEDDSDDDDSVDASQAGKKGKKKKGKAKADSEEEEEEEGTFKMKTAAQKKA
EKKERDRKKKEEDRAKLKKQKEKEEEKEGSIEVAAVPKKEKEVVKKSEQAAAPAAAPAAA
PAAAPTPAAAPAAETEAAEIEDQEGADPQGEAADAVVETMNEPNGNVFKVVKSGVTVYLH
AISSKCRNGLHSYCAMTDFCRGFCVTSEEEGGDKKGKKDKKKKKGDKEKEEKKKGPSKAT
VKAMQEALARMKEEEERAKKEEEENLRRLEEQEAQRLEQERLEQERKEKKKQKEKERKER
LKKEGKLLTKAQKEARARAEATLELLKAQGIEVPSKDDSVPKKKPVYGDKRKKKPQQAQT
PEEISEVMSPTSETAEPIISPMEVETPKVAAEVEQKAESAVDDWEAIAETIDQDKELKTV
HIEVKPETPKQPQQKPSSQPEEEEDDDEEEEDEEEDDEEEESEEEEEKESQPHMPQQAPA
TKRKGGKESSESSSDSDSDDDRTKEERIYDKAKKRIEKRRAENIKNINLDKLRSPVVCVL
GHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAIVEQTKMVKNFNNEAIKIPG
MLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTLESINLLKEKKCPFIVALNK
IDRLYDWKKSPDTDVVATLKKQKKNTKDEFDERAKAVIVEFAQQGLNAALFHENKDPRTF
VSLVPTSAHSGDGMGNLIALLVELTQTMLARRLAHCDELRAQVMEVKALPGMGTTIDVIL
INGVLREGMTVIVPGVEGPIVTQIRGLLLPPPMKELRVKNQYEKHKEVCTAQGVKILGKD
LEKTLAGLPLLVAHKEDEVAVLRDELVRELKQTLNSIKLEEKGVYVQASTLGSLEALLEF
LRVSKVPYAGINIGPVHKKDVMKASTMLEHDPQYATILAFDVKVERDSQEMADSLGVRVF
SAEIIYHLFDAFTKYREDYKKAKQDEFKHIAVFPTKLKILPQFIFNSRDPIVMGVNVEAG
VLRQGTPLCVPSKGFVDIGIVTSIEINHKMVDSAKKGQEICIKIEPIPGEAPKMFGRHFE
ATDILVSKITRASIDALKNWFRDEMGKSDWQLIMELKKTFEII
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacagaaaaagtcaggcgatgacagtgccaaagacgatggcatcgacctt
gacgccctagcagcagaaatcgaaggagcgggagcctccaaggagcaaggtaaaggaaag
gccaagaagaagaaagacaaaaagaaagacgattttgatgaagacgacatcctgaaggag
ctggaggaactctctcttgaaaccacaggagctaaaggcagcaagaaaccagacgccaca
gacgagccggagagcgccgccgagcccccgccgcccaccaaagcggagaagaagaagacg
cggaagggcaagcgagccagcctggaggatgacgacggggacgacgaagaggtttcgggt
acgggtgacgtggaaaacggagacaagcagaaggacaagaagacgtctgctgcccccgct
gctgctgctgctgctggctcagactcggaggacgacgcctcacggacccggagaaaaccc
aaggcagggaagaagggaggttgcaaggaggcctcggacgaggaagaggaggatgacgat
ggaggtgcgaggaaaggtgaggggggaggggaggatgattcagatgatgacgactcggtg
gacgcgtcgcaggccggaaagaaaggcaagaagaagaagggcaaagccaaggcagacagt
gaagaagaggaagaggaggagggaaccttcaagatgaagacggcagctcagaagaaggca
gagaagaaggagagagaccgcaagaagaaagaggaggacagggctaagctgaagaagcag
aaggagaaggaggaggagaaagaggggagtattgaggttgcagcagtgcctaagaaagag
aaagaggtagtgaagaagagtgagcaagcggcggccccagcggcggccccagcagcggcc
ccagcagcggccccaaccccagcagcggccccagcagcagagacggaggcagcagagatt
gaagatcaggaaggggctgatcctcaaggagaagctgccgatgcggtggtggaaacaatg
aatgaacccaatggtaatgtttttaaagtagttaaaagtggcgttactgtgtatttacat
gcaattagttcaaaatgtagaaatggcttgcacagttactgtgctatgaccgatttctgt
cggggattttgtgttacttcagaagaggaagggggagacaagaagggcaagaaagacaag
aagaagaagaagggggacaaggagaaagaggagaagaagaaggggcccagcaaggccaca
gtgaaggccatgcaggaggctctggctcgcatgaaggaggaagaggagcgcgccaagaag
gaggaagaggagaacctgcgtcgcctggaagagcaggaggctcagagactggagcaggag
cgtctggaacaggaacgcaaggagaagaagaaacagaaggagaaagagaggaaggagagg
ctgaagaaggagggcaaactgctgaccaaagcccagaaagaggcccgggccagggctgag
gccacacttgaactcctgaaggcccagggtattgaagtgccatccaaagacgactcagtg
ccaaagaagaagccagtgtacggagacaagaggaaaaagaagccccaacaagcacagacc
cctgaagagatctcagaggtcatgtcacccacgtcggagacagcagagccaatcatctca
ccgatggaggtggaaactcccaaagtagcagcagaggtagagcagaaagctgagtctgca
gttgatgactgggaggctattgctgagaccatcgatcaggacaaagagctgaagacggtc
cacattgaggtgaagccagagacgccaaagcagccccaacagaaaccctcgtcacagccg
gaggaagaggaggatgacgacgaggaagaggaggacgaggaagaggatgacgaagaggag
gagagtgaggaggaggaggagaaggagagtcagcctcacatgccgcagcaggccccagcc
actaagaggaagggagggaaggagagctcggagtccagtagtgacagcgactcagatgac
gatcgcactaaagaggagcggatctacgacaaggccaagaagcgtattgagaaacggcga
gcagagaacataaagaacataaacctggacaagctccgctcccccgtcgtctgtgtactg
ggccacgtagacacaggcaagaccaagatcctggacaagctgaggcatacacacgtacag
gacggagaggcaggagggatcacccagcagatcggagccactaacgtaccgctggaggcc
atcgtagagcagaccaagatggtgaagaactttaacaacgaggccattaaaatcccagga
atgctgatcatcgacaccccaggccacgagtctttcagtaacctgaggaaccggggcagc
tctctgtgtgacatagccatcctggtggtggacatcatgcacggcctggagcctcagacc
ctggagtccatcaacctgctcaaggagaagaagtgtcccttcattgtagcacttaacaag
attgaccgcctgtacgactggaagaagagtccggacacagacgtggtggccacactgaag
aaacagaagaagaacaccaaggatgagtttgacgagagggccaaagctgtcatcgtggag
ttcgcccagcagggtctgaacgcagccctcttccatgagaacaaggaccctaggaccttt
gtgtctctggtgcccacgtcagcccactccggggacggcatgggcaacctgatcgctctg
ctggtggagctcacccagaccatgctggcacgacgcctggcacactgcgatgagctcagg
gctcaggtcatggaggtgaaggccctgcctggtatgggcaccacgatagacgtgatcctg
atcaacggggttctccgggagggcatgaccgtcatcgtcccgggggtggagggacccatc
gtcacccagatcagggggctgctgctgcctccacccatgaaggagctcagggtcaagaac
cagtatgagaagcataaggaggtgtgtacggcccagggagtgaagatcctggggaaagac
ctggagaagaccctggcagggctccccctgctggtggcccacaaggaggacgaggtggcc
gtgctcagggatgagctggtgcgggagttgaaacagactctgaactccatcaagctggag
gagaagggtgtgtacgtccaggcctccactctcggatccctggaagccttgctcgagttc
ctacgagtgtccaaagtgccttacgctggcatcaacatcggtccagtccacaagaaagac
gtgatgaaagcttccactatgctggagcatgacccacagtatgcaacgatcctggcgttt
gatgtgaaggtggagagggactctcaggagatggctgatagtctgggggtcagggtgttc
agcgctgagatcatctaccacctgtttgatgccttcaccaagtacagagaggactacaag
aaggccaagcaggacgagttcaaacacattgctgtgttccccactaagctgaagatcctg
cctcagttcatcttcaactctagagaccccatagtcatgggagtcaacgtggaggctggg
gtcctcagacagggaaccccactctgtgtgcccagcaaggggtttgtggacattggcatt
gtgaccagcattgagatcaaccacaagatggtggacagtgccaagaagggccaagagatc
tgtataaagatcgaaccgatccccggagaggcacccaagatgttcggccgacactttgag
gccaccgacatcctcgtcagcaagatcaccagagcgtccatcgatgccctgaagaactgg
ttcagagacgagatgggcaaatctgactggcagctcatcatggagctcaagaagactttt
gagatcatctga
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