Salmo trutta (river trout): 115179443
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Entry
115179443 CDS
T08542
Name
(RefSeq) obscurin-like protein 1 isoform X1
KO
K19574
obscurin-like protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115179443
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
115179443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Izumo-Ig
Ig_4
Ig_6
Ig_5
C2-set_2
C1-set
VEGFR-1-like_Ig-like
fn3
Motif
Other DBs
NCBI-GeneID:
115179443
NCBI-ProteinID:
XP_029596839
LinkDB
All DBs
Position
39:complement(5739656..5759468)
Genome browser
AA seq
2243 aa
AA seq
DB search
MDIFGGAPRVLGYARPVAAQCGTDAVLQCKIGGDPRPEVVWEKKNVQILSEGRYRLSEEG
QAYFLHITGVRLEDAGQYICKASNSVGETCAPATLKVEGDSQEREGVQKQTEVNGVQQTR
LENGELGGQRNGEVEQRSGEVDQQSGEVDQQSGEVDQQSGEVDQQSGEVEKENGEGSERE
KKKQRYEGEPLLSDDRPHFLIKPLSLRVDRGEDAAFSCKLSGNPLPQVVWEKDGKKLSDI
FESAHFNVSSQDGGWFQLKIFRTRMPDGGVYTCRAHNNQGGALAGAVLLVELVPERQESG
ASTSNGCSNGQTSPRSMRHRMGRHGLSRQPDEPNLNSANVKKFAVSEGKHAKFRCFVTGK
PKPEIIWKKDGAPLEAGRRHLLFEDREGYYTLKVMYCKHQDTGLYVCAASNALGHTLSSV
YLTVKAPAVRFRRSLQDVEVRERGMAVLECEVPNEGIPTAWYLEDQRLQPGGKYGIEQKG
TRRRLTIRDVGADDDGVYLCEMPDGGKSIAELAVKGTIVKKLPRKLDVLEGENAVFCVEV
EEENMDVHWFKDGLKLRESHQTILKSFGKTHILVFVNVCHGDTGVVTFVVGRSKTSSRLR
VKAARHSPPICPVGVEMDVDRPNSVLLSWEPAPTSQTTTRSVYVLERQEVGSQEWLRCAT
SDTVTSAEVMGDSVPCEGDYRFRVCCINKYGRSGHVEFPKVVHLVPGPKIRTPLQGCEVT
EGEDALFSIDLSVMVTGTWFLNSTQLQDSQRYSIQQAKTQHSLIIHSTKVEDHEAEVTFI
ANGVRDSAVLKVQAAVVKFSPMSESDSNKRVETGDPVVLYCEVSHPSARVGWFKDGVELQ
VKDGLNIQSEGNMRRIVIQSAEFTDSGVYTCETMVDVIKFNVEVEGPPVQFSEVPEEELQ
KSAMELDPVVLTCEVSREDANATWYKDGVEVQASDNITIQTEGNMRRLIIRCAETSDAGT
YSCQSGDNSLSFTVNIKEPPVMIVEPKEDVVMEGHISEQVVLQCELSRSSGKVHWFKDGL
QVLETENVQLTSEGPYRRLTVLCGSAEDSGEYVCDTDGDSVFFQVTITELPVRIVSPTES
ELELTNLTSERLELSCEISQSDAQVRWYRDGLEVEESASLILEVQGAHRTLVIPTTTVED
TGEYVCDTEDDSVTWLVTITEPPVKLARSETMSDVMDCFSGDPIILEIEVSRFNAEVIWM
KDGGEVEESSDVTITDDGLIRRLTIHTPAPGDSGKYTCLASDDLIDFQVKVSEPPVKIVN
RSEVKTEVKSLPSDDIELECQLSRANAVAKWYKDGRRLNEDERFCEEEEGAFRSLVILNA
ELEDCGDYFLDAGDDNITFHVTVQEPPVTILGNSEDADYQEMVAGDDLILACEVSRANAP
VQWYCNDRQLTSDDRTYIESYGTLRKIILSDILPSDSGKYMCDAIDDKMVTMVKIQDSPV
TFVDKQAVNIITGYEAESVTLMGVVSKENAPVRWLKDWTPVIGDRFHTGVDGTTRFLTID
PLRRSDSGEYTVDANTDEMHFSLLVKEMRVKFAKPLHDTVAHADGMVTIRCEVCKPKADV
QWLKNGVEIVPSRRFTIRADGVERSLTIHRLTREDTGEYACESKDDRTAARLRVEMPRVV
EFLTELHNTMVLEGEDATFKCVVSPEDVQLVWGMDGELVVMGDRFQATQNGLCHTLVIKS
CQVLDSSKITVEAEGNVSKATLKVQEAQVTFTKKMEAVMAEEYGDATMETEVSLDTGEVQ
WMRQGVVIQPGPRHTLGQSGCKRSLTICNLNLSDRGTYRCETLHDRTQVKLNVEPRKIAI
RKGLVETDTFERETASFEVELSHTDVEGVWQKDGIRVKPSNHWRVSCNGLVHGLTLSNLT
LEDTGTIVFSAEGVRTSARLTVKETPVTIMKELVDMRLEQGSPATLECELSRQNVEVRWL
KNGTELKPGKTQYRIYSMGRKRFCQLLQCSLSDVGTYTCDVGDVNTSCNLEVYEPELEVL
HGLEDLYVQEDQNAVFMCEVSMEDVTGEWYKDGHKIRPTSTIKIRTEGTKHFLLMCNVQA
EDSGEIRFVTKQTESTAYLEVEEAPVSIVKPLRDRTALEKHRVILDCTVSTPRCDLTWYR
GKAELVSSDRLEIHSDGCYHKLTIHEATVEDEGTYSIEVGEHTSTAQLLVEAQSLVIETE
LEDVAVTAPDQACFQCEVSVAISRPPVWTLNGETIQSSPDVRLENHGTVHKLNLKQTRPD
MSGTVTFAMGKAKSSAKLNVMWK
NT seq
6732 nt
NT seq
+upstream
nt +downstream
nt
atggacatattcggtggtgccccccgtgtactgggctacgcgcgccccgtggcagcacaa
tgtggcacggacgccgtcctgcaatgcaagatcggcggcgaccctcgtcctgaggtggtc
tgggagaagaagaatgtacagatcctgtcagagggacgctacaggctgtcggaggagggc
caggcctacttcctacacatcactggggtcaggctggaggacgcaggccagtatatctgc
aaggccagtaacagcgtgggtgagacgtgcgcccctgccacactgaaggtggagggggac
agtcaggagcgggaaggggtacagaaacagacagaggtcaatggggtgcagcaaaccagg
ctggagaatggagagttaggggggcaacggaatggggaggtagagcagaggagcggagag
gtagaccaacagagcggagaggtagaccaacagagcggagaggtagaccaacagagcgga
gaggtagaccaacagagcggagaggtagagaaggaaaatggagaggggagtgagcgggag
aaaaagaagcagcgctatgaaggggagcccctgctgtcagacgacagacctcacttcctc
atcaagcccctctccctgagggtggaccggggcgaggacgcagccttctcctgtaagctg
tcgggcaaccctctgccacaggtggtgtgggagaaggacgggaagaagctgagcgacatc
ttcgagagcgcccacttcaacgtcagcagccaggacggaggctggttccagctgaagatc
ttccggacgcggatgcccgatgggggtgtctacacctgcagagctcataacaatcaagga
ggggcgctggcgggtgcagtgctgcttgtggagctcgtcccggaacggcaggagagcggg
gcgtccacgtcaaatgggtgcagcaacgggcagacatcacctcgtagtatgaggcacagg
atgggaagacacggtttgtcgagacagccggacgagcccaatctgaactctgccaatgtg
aagaaatttgcggtgtcggaggggaaacatgctaagttccgctgcttcgtgacagggaaa
cctaagcctgagatcatctggaagaaagacggagcgcccctagaggctgggaggcgtcac
cttctgtttgaggacagagagggttactacacgctcaaagtgatgtactgtaaacatcag
gacacagggctgtacgtgtgcgctgcgtccaatgctctgggacacaccctcagctctgtt
tacctgactgtcaaagctccagcagtgcggttcaggcggtcactgcaagacgtggaggtg
agagagagaggcatggccgtgttggagtgtgaggtacctaatgagggcatccctactgcc
tggtacctggaggaccagagactgcagccaggaggtaaatacggcatagagcagaaagga
accaggcgcaggctcaccatccgagatgtaggagcggacgacgatggggtctatctctgt
gagatgcctgatggagggaagagtattgctgagctggccgtcaaaggcacaattgttaaa
aaacttcctcgaaaactagacgtgttagagggggagaacgcagtgttctgtgtggaggta
gaggaggagaacatggatgtccactggttcaaagatggcctgaagctacgcgagagccac
cagactatcctcaagtcctttggtaaaacccacattctggtgttcgtcaacgtctgccac
ggggacactggggtcgtgaccttcgttgtgggaagatccaagacctcttcccggctcaga
gtcaaagctgccagacacagccctcccatctgtccagtgggggtggagatggatgtggac
aggcccaacagcgtactcctctcctgggagccggcccccaccagccagaccaccacgcgc
tccgtctatgtcctggagagacaggaggtgggatcgcaggagtggctgaggtgtgcgacc
tccgacacagtgacctcagcagaggtcatgggagacagcgtaccgtgcgagggcgattac
cgcttccgcgtctgctgcatcaataagtatggtcgtagtggacacgtggagttccctaaa
gtcgtccatcttgtgccaggtcccaagatcaggacccctctccagggctgtgaggtgacg
gagggggaggacgccctgttctccatcgatctgtcagtgatggtgacgggtacctggttc
ctgaacagcacccagctacaggacagccaacgctattctatccaacaggccaagacacag
cactccctgatcatccacagcaccaaggtggaagaccacgaggcagaggtcaccttcatc
gccaatggagtcagagactcagcggttctcaaggttcaagctgcggtggtgaagttcagc
ccaatgtcagagtccgacagtaacaagagggtggagactggtgaccctgtggtcctgtac
tgtgaggtgtcccacccctcagccagggtgggctggttcaaggatggggtggagctacag
gtgaaagacggcctcaacatccaatcagaaggcaacatgaggaggatcgttatccaatca
gctgagttcaccgactctggcgtgtacacatgcgagacgatggtagatgtcatcaaattc
aacgtggaggttgaaggtccccctgtgcagttcagtgaggtccctgaggaggagctccag
aagtctgccatggagctggatcctgtggtgctcacctgtgaggtttccagagaggacgcc
aacgctacctggtataaggatggggttgaggtccaggccagtgataacatcaccatacaa
acagagggcaacatgaggagactgatcatccgttgtgctgagacctcagacgcaggaacc
tacagctgtcaatcaggagacaacagcctctcattcactgtcaacatcaaagagcctcca
gtgatgatcgtggagcccaaggaggacgtggttatggagggtcatatctctgagcaggtg
gtgctgcagtgtgagctgtcccgctccagcggtaaggtccactggtttaaggatggcctt
caggtcctggagacggagaacgtccagctgacgtccgagggaccgtacaggaggctgacc
gtcctctgcggctcggcagaagattccggagagtacgtctgcgacacggatggagactct
gtgttcttccaggtcaccatcacagagcttccggtgcgaatcgtctcccccactgagtct
gagctggagctgaccaacctgacctctgagaggctggagctcagctgtgagatctcccag
tctgatgcccaggtacggtggtaccgtgacgggctggaggtggaggagagtgcctctctc
atcctggaggtccagggagcccacaggacactggtcatccccacgaccactgtggaggac
acaggagagtatgtgtgtgacacagaggacgactcggtcacatggctggtcactattaca
gagcctcctgtgaagctggcccgctctgaaacaatgtctgacgtaatggactgtttctct
ggagaccccatcatcctggagattgaggtgtcacggttcaacgctgaggtgatctggatg
aaggatggaggagaggtggaggagagcagtgatgtcaccatcactgacgacggactcatc
cgccgcctcaccatccacacgcccgcccctggggactctggaaaatacacctgtcttgcc
tcagatgacctcatcgacttccaggtcaaggtgtcagagcccccagtgaagatcgtgaat
aggtcagaagtcaagacagaggtcaagtctctgccctctgatgacatcgagttggagtgt
caactctccagggccaatgccgtcgctaagtggtacaaagatggccgccggttaaacgag
gacgagaggttctgtgaggaggaagaaggggcgttccggtccctggtgatccttaacgct
gagctggaagattgcggagattacttccttgatgccggagatgacaacatcaccttccat
gtcactgtgcaagagcctccagtgaccatcctggggaactctgaggacgcagactaccag
gagatggttgccggggacgacctgatcctggcctgtgaggtgtcccgggccaatgcccct
gtccagtggtactgtaacgacagacagctgactagcgatgaccggacctacatcgagagc
tatggcacactgaggaaaatcatcctctctgacatcctgccctctgactctgggaagtac
atgtgtgatgctatcgatgacaagatggtcaccatggtgaagatccaagactcccctgtc
accttcgtagacaaacaggcagtgaacatcatcacgggttacgaggcagagagcgtgacg
ctgatgggggttgtgtctaaggagaacgctcccgttcgctggctcaaggactggacgccc
gtcataggggaccgcttccacacgggggtcgacggcaccacccggttcctcaccattgac
ccgctgagacggtcggacagcggagagtacacagtagacgccaacacagacgagatgcac
ttcagtctgctagtcaaagagatgagggtgaagtttgccaagccgctccacgacaccgtg
gctcatgcggacggcatggtgaccatacgctgtgaggtgtgtaagcccaaggcggacgtc
cagtggctgaagaacggcgtggagatcgtccccagccggaggttcaccatccgggccgac
ggcgtggaacgcagcctcaccatccacaggttgaccagggaggacacgggggagtacgcc
tgcgagtccaaggacgaccgcaccgccgccaggctcagagtcgagatgccccgcgtggta
gagttcttgacagagctccacaacaccatggtgttagagggagaggacgccaccttcaag
tgcgtggtgtcgccagaggacgtgcagctggtgtgggggatggacggcgagctcgtcgtc
atgggtgaccgtttccaggcgacgcagaacggcctgtgtcacaccctggtgatcaagagc
tgtcaggtcctggactcctctaagatcacagtggaggctgaggggaacgtgtctaaagcc
accctcaaagtacaggaagctcaggtgaccttcactaagaagatggaggcggtgatggcc
gaggagtacggagacgctaccatggaaacagaggtcagtctggacacgggcgaggtccag
tggatgaggcagggtgtggtcatccagccaggaccccgacacaccctgggccagagcgga
tgcaaacgcagcctgaccatctgtaacctcaacctctctgaccgcggaacctaccgctgt
gaaaccctgcacgaccgcacgcaggtcaaactcaacgtggagccccgtaagatcgccatc
cgtaagggtctggtggagacggacacgtttgagcgggagacggcctccttcgaggtggag
ctgtctcacactgacgtggagggcgtctggcagaaggacggcatccgggtcaaacccagc
aaccactggcgggtgagctgcaacgggctggtccacggcctcaccctgtccaaccttacc
ctggaggacacgggtaccatcgtcttctctgcggagggagtccggacctctgccaggctc
actgtcaaggagactccagtgactatcatgaaggagctggtagacatgagactggagcag
ggctctcctgccacattggagtgtgagctgtccagacagaacgtggaggtcaggtggctg
aagaatgggacagagctgaagccagggaagacccagtaccggatttactccatggggagg
aagaggttctgtcagctgctacagtgtagcctctctgatgtaggcacctacacctgtgac
gtaggagacgtcaatacatcctgtaacctggaggtctatgagcctgaactggaggtgcta
catgggctggaggacctgtatgtccaggaggaccagaatgctgtgttcatgtgtgaggtg
tccatggaggacgtgactggggagtggtacaaggatggacacaagatacgacccactagc
accatcaagatacgcacagaggggaccaaacacttccttctcatgtgcaacgttcaagct
gaggattctggggagatccgctttgtgaccaaacagacagaatcaacagcctacctcgag
gtggaagaggcccccgtgtctatcgtgaagcctctgagagaccgcacggctctggagaag
caccgcgtgattctggactgcaccgtgtccacgccgcgctgtgacctcacatggtacaga
ggcaaggcagagctggtgtcttctgataggctagagatccacagtgacggctgctaccat
aaactgaccatccacgaggcgactgtagaggacgagggtacctatagtatagaggttggg
gagcacacatccacagcccaactcctggtggaagcccagtccctggtgatagagacagag
ctggaggatgtggcggtgacagctcctgaccaggcctgtttccagtgtgaggtgtccgtg
gccatcagcaggcccccagtctggactctgaacggagagaccatccagtccagccctgat
gtccgcttagagaaccacggaaccgtccacaaactgaacctgaaacagaccagaccagac
atgagcgggacggttaccttcgccatgggaaaggccaagagcagcgccaaactgaacgtg
atgtggaagtag
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integrated database retrieval system
