Salmo trutta (river trout): 115179450
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Entry
115179450 CDS
T08542
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115179450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115179450
03021 Transcription machinery [BR:
stru03021
]
115179450
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115179450
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115179450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115179450
NCBI-ProteinID:
XP_029596853
LinkDB
All DBs
Position
39:complement(3621565..3635404)
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AA seq
647 aa
AA seq
DB search
MLLFHFAKEKHVITTLCHGLFVVMLLSLLMPDSIINLSVSSKSNMENGDIVKGVLTNGRD
SQKQTVMSLTNAQSQALLQQLTLSPAQQQLFLQQAQAQLLAAAVQQHSASQTQNSSTTGA
AISASAATPITTQLPLSQPIHITPLQQQGLQQFVLVQPGHSMATQLQPQFFISQTPQGQP
SMFQYHNLLQAQNLLTQLPQSQANLLQTPTITMAPQAAAPTRTITATPGQLLIHSQTPPP
KGLGTPTLEDASDLEELEIFSKAFKQRRIRLGFTQGDVGLAMGKLYGNDFSQTTISRFEA
LNLSFKNMCKLKPLLEKWLNDAENVSSESSPSLSPLGSGHGSPSLASDLNSRRRKKRTSI
DTNIRVALEKSFLQQNQKPSSDEISLIADQLNMEKEVIRVWFCNRRQKEKRINPPSSSAF
QKSIFSSPTTASLVNTVPQTTVTVTPSLPVTSFSLTDRTLASATGNTASVISSTPTVPSM
SLTPSSSVTTMSQPAVTMTQAGQMLYSNGGGLAAMAAAAAGISPSLMPSSQFNTGGALLN
LTTAGFGGALATIQGVLSALASSGSFPITTLDGNGNLLFANTSMPGSAPSMVNTPLFLNP
QSLSLLGSNPVSFIPASALSLQLTAGTNTITTATTPVNTIVRASKAQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgctactgttccactttgcgaaagaaaaacatgtcattactactctctgccatggttta
tttgtagtgatgttattgtctcttttgatgccagactcgataatcaacctgtcagtatcc
agtaaaagcaacatggagaacggggacatagtcaaaggcgtgctgaccaatggccgggac
tctcagaagcagactgtcatgtccctcaccaatgcacagtcacaggctctgctgcaacag
ttgaccttgtctccagcgcagcagcagctgtttctccagcaggctcaggcccagctcctt
gcagcagccgttcagcagcactccgccagccagacccagaacagcagcaccacgggggcc
gccatctctgcctccgcagccacccccatcaccacccaactcccactgtcccagcctata
cacatcactcctctccagcagcagggcctgcagcagtttgtgttggtccagccaggtcat
tccatggccacccagcttcagcctcagttcttcatctcccagactccacagggacagccc
agtatgtttcagtatcataatctcctgcaagcccaaaatcttctcactcaactacctcag
agccaagccaacctcctacagactccaactatcacaatggctccacaggcggccgctccc
acgcggaccataactgccacccccggccagctcctcatccacagccagaccccgccccct
aagggtctgggcacgcccactctggaggacgccagtgatctggaagagctggagattttc
tccaaggccttcaaacagaggaggatcagactgggcttcacacagggtgacgtggggctg
gccatggggaagctgtatggtaatgacttcagccagaccaccatctcccgctttgaagca
ctcaacctgagcttcaagaacatgtgcaagctgaaaccgctgctggagaagtggctcaac
gacgcagagaatgtgagctcagagtccagccccagcctcagtcccctgggctctggtcac
gggtcacccagcctggcgtctgacctcaatagccggcgccgcaagaagaggaccagcatc
gacaccaatatccgcgtggccctggagaagagcttcctccagcaaaaccagaagccgtcg
tcagacgagatctccctgatagcagaccagctgaacatggagaaggaggtgatccgggtg
tggttctgtaaccgccggcagaaggagaagaggatcaatcctcccagcagctcagctttc
cagaagtccatcttctcgtcccctactactgccagcctggtgaacactgtaccccagacc
actgtgaccgtcaccccctctctgcctgtcaccagcttcagcctcacagacaggacccta
gcgtcagccaccggcaacacagcatccgtcatctccagcacccctacagtcccctctatg
tccctcacaccctcctcctccgtgacaaccatgtcacagccagccgttaccatgacgcag
gcggggcagatgctctacagcaacggcggcggtctggctgcaatggcggctgcagcggcg
ggaatcagcccgagtctcatgccctcatcgcagttcaacacagggggggccttactgaac
ctaaccactgcaggttttggaggagcgctcgccaccatccaaggtgtgttgagtgctctg
gcctccagcgggtccttccccatcaccaccctggacgggaacgggaacctgctatttgcc
aacaccagcatgcctggctccgcccccagcatggtgaacacgcccctcttcctgaacccc
cagagcctgtccttattgggtagtaaccctgtcagcttcatccctgccagtgccctcagc
ctgcaactcaccgctggcaccaatactatcaccacggcaaccacaccagtcaacaccatc
gtcagagcctctaaggcccaatga
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