Salmo trutta (river trout): 115179695
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Entry
115179695 CDS
T08542
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115179695
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115179695
Enzymes [BR:
stru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115179695
Peptidases and inhibitors [BR:
stru01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115179695
Ubiquitin system [BR:
stru04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115179695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
115179695
NCBI-ProteinID:
XP_029597238
Ensembl:
ENSSTUG00000037972
LinkDB
All DBs
Position
39:complement(6954004..6977369)
Genome browser
AA seq
2596 aa
AA seq
DB search
MTVTTRGSPVGGNDSQGQAPADSQSQPPPTQAQMVSPNPSSTEPSPVSPLAAEEEQGQGD
SAPALEEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCE
ACQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIITNTHRLVELCVTKLPQDWFPLLELL
ATATNPHCKFHIYNGTRPSETIPAGATLADDELFARSPDPRSPKGWLVDLINKFGTLNGF
QTLHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEEL
KKEAKNEAKNDALSMIIKSLKNLSSRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNA
LNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLE
KILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKE
SWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIK
ILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSP
HVFYRHDLINQLQHNHALVTLVAENLSAYMETMRPFSKAEHADFDPQTVRVGSRYSHVQE
VQERLNFLRFLLKDGQLWLCAPQAKQIWRCLAESAVFLCDREACFKWYSKLMGDEPDLDP
DINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDY
LWRVVIQGTDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQLCFDRLKASYDTLCVL
DGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERSILPMSRAFRGKHITLIVRFP
NQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGEVVDPADDRKLIGQL
NLKDKALITAKLTQVSATVPSSPDSSSDSSTGSPSNHGNHFSEGPNPEVEGCLPGVIMSL
HLRYISFLWQVADLGCTLNMPLLRDGARLLMKLMPPDNSTVENLRAICLDHAKLGENSLS
PTLDSRFFGPSPSQVLYLTEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVLSMLTRN
NFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTSPASPINQATHD
QALVLQSALQNIPNPASECMLRNVAIRLAQQISDESLPPNSQNFFQASKYIPDLCVIRAV
QKIVWASGCGTVQLVFSSNEEISQIYEKTNAGKEPDGEDEMVCCEALEIMTLCFALLPTA
LDTLSKEKAWQTYIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLG
STAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEALLNNEIDWLKKIRDEVKRTGETGV
EETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSGE
FPTEQAIPVCSSPASINAGFELLVALPVGCVRNLKQIVDTLTDMYYLGCEALTEWEYLPP
VGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGVLAVEGTGTDVDDELSGDEKQEN
ETNADGTARDEVFAYQHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYVPR
GFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKAMGHPSMLSKVLGGSFADQKICR
DCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLL
IKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDGNPESQ
MIMQNEPSEPDPPGCSSKYRLVGVLVHSGQASGGHYYSYISQRDGGAGGSANSGQKERWY
KFDDGDVTECKMDDDEEMKSQCFGGEYMGEVFDHMMKKMSYRRQKRWWNAYILFYERMDA
AGGGAAVEADGELARCISELTVSPTTPRQVTMPGAIECSVRKQNVQFMHSRMQYSLEYFQ
FVKKLLTCNSVYLNPPPGQDHLLPEAEEIAMISIQLAARFLFSTGFHTKKVVRGPAGDWY
DALCILLRHSKNVRCWFAHNVLFAYPTRFSEYLLECPSAEVRGAFAKLIVFIAHFSLADG
PCPAPASSPEGSTQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLA
EKTQLLKLSVPATFMLVALDEGPGPPIKYQYAELTKLYAVVSQLLRCCDVSTRMQSSING
NPALANPYGDANLTTPIMPLQQLVSEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENP
QFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFD
TIQRSKNHYQKRAYQCIKCMVALFSNCTVAYQILQSNGDLKRKWTWAVEWLGDELERRPY
TGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEVRKEPDDQEATEDH
DSSPPEDTALYPHNPAPATQFQQQNNHPHAQPYTGPAAQHMNTPQRPPQRAQESWESTTE
EVGPVAPPPAVQTAKE
NT seq
7791 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcaccacccgtggctcccccgtggggggcaatgatagccagggccaggcaccc
gctgattctcagagccagcccccacccacacaggcccagatggtttcccccaacccgtcg
tccacagagccgtctcctgtgagcccactggcggcggaggaggagcagggccaaggagac
tctgcccctgctctggaggaggaggaggagcctgccttccctcacactgacctggccaag
ctggacgacatgatcaacaggccccgatgggtagtcccagtcctgccaaagggggaatta
gaagttttacttgaagctgctatagacttatgtaaaaaagggcttgatgtgaagtgtgag
gcgtgccagaggtttttcagggacggcctgaccatctccttcactaagatcctcacagac
gaggctgtcagcgggtggaagtttgagatccataggtgtatcatcaccaacacacaccgg
ctggtggagctgtgtgtgaccaagctccctcaggactggttccccttactggagctactg
gccacagccaccaacccccactgcaagttccacatctacaacggcacgcggccctctgag
accatccccgccggggccacgctggccgatgacgagctcttcgcccgctcacccgaccct
cgctcacccaagggctggttggtggacctgattaataagtttggcacgctgaacgggttt
cagactctacacgaccgcttcatgagcggacaggcactcaacgtacagatcatcgctgcc
ctcatcaagccgttcggccagtgctacgagttcctgaccttgcacacagtgaagaagtac
ttcctgccagtgatcgagatggttcctcagttcctggagaacctgacggacgaggagctg
aagaaggaggccaagaacgaggccaagaacgatgccctgtccatgatcatcaagtccctg
aagaacctgtcctccagggtgcccggtcaggaggagaccgtcaagaacttggagatattt
aggttgaaaatgatcctaaggttattgcagatttcctcgttcaacggcaagatgaacgct
ctgaatgaggtcaacaaggtcatctccagcgtgtcctactacacgcatcggcatggcaac
cccgaggaggaggagtggctgacggcagaacgcatggcggagtggatccagcagaaccac
atcctgtccatcgtgctgagggacagcctccaccagcctcagtacgtagagaaactagag
aagatactccgcttcgtcatcaaggagaaagccctcaccatgcaggacctggacaacatc
tgggcagcgcaggctggtaagcacgaagctatagtgaagaacgtccatgaccttctggcc
aaactggcctgggacttctctccagagcagctcgaccatctctttgattgcttcaaggag
agttggacgaatgcgagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctg
gcggaggacgataaggatggagtgatggcccacaaggtgctcaacctgctgtggaacctg
gctcacagtgacgacgtccccgtggacatcatggaccaggccctcagtgcacacatcaag
atactggactacagctgctctcaggacagagacacccagaagatccagtggatagaccgc
ttcatcgaggagctgcgcaccaacgacaagtgggtcataccagccctgaagcagatcaga
gagatctgcagcctgtttggggaagctcctcagaacctcagtcagacccagaggagtcct
catgtgttctatcgtcatgacctgatcaaccagctgcagcacaaccatgccctggtcact
ctcgtggctgagaacctgtctgcctacatggagaccatgagaccgttctccaaagctgaa
catgcagactttgaccctcagacggtcagagtgggaagtcgctatagtcatgttcaggag
gtccaggagaggctcaacttcctgaggttcctgttgaaggacggacagttgtggctatgt
gctcctcaggccaagcagatctggaggtgtctggctgagagcgctgtcttcctgtgtgac
cgggaggcgtgcttcaaatggtactctaagctaatgggagatgagccagacctggacccg
gacatcaacaaggacttctttgagaacaatgttctgcagctggacccgtccctgctcacg
gagaacggcatgaagtgcttcgagaggttcttcaaggccgtcaactgccgcgagggcaaa
ctggtggccaaacgcagggcctacatgatggatgacctggaactcataggactggactac
ctctggagggtggtgatccagggtactgatgacatcgccagccgagccatcgacctgctg
aaggagatctacaccaacctggggcccaagctgcaggtcaaccaggtggagatccacgag
gacttcatccagttgtgttttgaccgtctgaaggcgtcgtacgacacgctgtgtgtcctg
gacggggacaaggacagcatcaactgtgcccggcaggaggccattcgcatggttcgcgtg
ctcactgtgctcaaggagtacatcaacgagtgtgacagcgactaccacgaggagaggtcc
atactgcccatgtccagggcgttccgggggaagcacatcacgttgattgtgcgtttccct
aaccagggtcgtcaggtggatgacctggacatctggtctcacaccaatgacaccatcggc
tcggtgcgccgcggcatcctcacacgcatcaaggccaacgccacgcacaccaagatagag
ctcttcattggcggggaggtcgtcgacccggcggatgacaggaagttgattggacagctc
aacctcaaggataaagcattgatcacagccaagctgacccaggtgagtgccaccgtgccc
tccagtcctgacagctcctcggactcctccaccggctcgcccagtaaccacggcaaccac
ttcagcgaagggcccaacccagaggtggagggctgcctgcctggagtgatcatgtctctc
cacctgcgctacatctcgttcctgtggcaggtcgcagacctgggctgtaccctcaacatg
cctctgctgcgagacggagccaggctcctcatgaagcttatgcctccagacaacagtacc
gtggagaacctgcgtgctatctgtctggatcatgccaagctgggagagaacagcctgagc
cccacactggactcccgcttctttggcccctcgccctcacaagtcctctacctcactgag
gtggtgtatgcgttgctgatgccggccagcggcaccctcggcgaggacgccagcgacttc
cagtacaacttcctgaagagcggcggcctcccgctcgtactgagcatgctcaccaggaac
aacttcctgccgtcggccgacatggagacgcgacggggggcgtacctcaatgccctgaag
atcgccaagctgctgctgaccgccgtggggttcggacacgtcaaagctgtggccgaggcc
tgccagcccgtagtggaggggaccagccccgcatcaccgatcaaccaggcgacccacgac
caggccctggtcctccagagtgctctacagaatatccccaaccccgcctctgagtgcatg
ctccgcaacgtggccatacgactggcccaacagatctctgacgagtctctgcccccgaac
tcccagaacttcttccaagcatccaagtacatcccagacctctgtgtgatccgggcggtg
cagaagattgtgtgggcttcaggctgtggcacggtacagctggtcttcagctctaatgaa
gagatcagtcagatctatgagaagacgaacgcgggtaaggagccggacggggaggatgag
atggtgtgctgtgaggcgctggagatcatgaccctgtgttttgccctgctgcccaccgct
ctggacacgctcagtaaggagaaggcctggcagacttacatcatagacctgctactgcac
tgccacagcaagtcagttcgtcagatggctcaggagcagttcttcctcatggccactagg
tgctgtatgggacacagacccctcctcttcttcatcactctcctcttcaccgtcttaggg
agcacggcaaaggagagggcgaagcacgcaggggactactttacgctgctgaggcacctg
ctgaactacgcctacaacagcaacatcaacctgcccaacgctgaggcgctgctcaacaac
gagatcgactggctcaagaagatcagggatgaggtgaagcggacaggagagacgggggtg
gaggagaccattctagaaggtcacctgggggtcaccaaggagctgctggccttccagaca
ccagagaagaagtactacattggctgtgagaagggcggggccaacctcataaaggagttg
atagatgacttcatcttcccggcgtctaacgtgtacctgcagtacatgaagagtggggag
ttccctacggagcaggccatccctgtctgtagcagccccgcctccatcaatgccggcttc
gagttgctggtggctctgccggtcggctgtgtccggaacctcaagcagatcgttgataca
ctcactgatatgtactacctaggttgtgaggctctgacagagtgggaatacctcccccca
gtggggccgcggcccaccaaaggctttgtggggctgaagaacgcgggggccacctgctac
atgaactctgtcatccagcagctctacatgatcccgcccatccgtaacggcgtcctggcc
gtggagggcaccggcaccgacgtggacgacgaactgtccggggacgagaagcaggagaac
gagactaatgccgacggaacggcgcgggacgaggtgttcgcctaccaacaccagtttgac
gacaagccctcgctgagtaagtcggaggacaggaaggagtacaacatcggggtgctacgc
cacctacaggtcatctttggtcacctggcctcctcccgactgcagtactacgtaccccga
ggcttctggaaacagttcaggttatggggtgagccggtgaatctgcgagagcagcatgat
gccctggagttcttcaactctttagtggacagtctggacgaggctctgaaggccatgggc
cacccctccatgctcagcaaggtgcttggaggctcctttgccgaccagaaaatctgccgt
gactgcccacacaggtatgagtgtgaggagtcattcaccacgttgaacgtggacatcagg
aaccaccagaacctgctggactctatggagcagtatgtcaaaggagacctgctggaggga
gccaacgcataccactgtgagaagtgcaacaagaaggtggacacggtgaagcgtctgctg
ataaagaagcttcctccagtgctggccatccagctgaagaggtttgactacgactgggag
agggagtgtgccatcaagttcaacgactactttgagttccccagggagctggacatggag
ccctacactgtggccggggtggccaagctggagggagacgacggaaacccggagagccag
atgatcatgcagaatgaaccatcggaacccgacccaccaggctgcagttctaagtaccgc
ctggtgggggtgctggtgcattcgggccaggccagcggcggccactactactcctatatc
agccagcgagacggcggtgccggcggtagcgccaacagcgggcagaaggagcgctggtac
aagtttgacgacggtgacgtgacggagtgcaagatggacgacgacgaggagatgaagagc
cagtgcttcgggggggagtacatgggagaggtgtttgaccacatgatgaagaagatgtcc
tacaggaggcagaagagatggtggaatgcctacatcctgttctatgagaggatggatgcg
gcagggggaggggccgcagtggaggcagacggagagttggccaggtgcatctcagagctg
actgtgtctcccactacaccacgacaggtgacgatgccgggggccattgaatgcagtgtg
aggaagcagaacgtccagttcatgcacagccgcatgcagtacagcttggagtacttccag
ttcgtcaagaagctgctgacctgcaacagcgtctacctcaaccctcccccaggtcaggac
cacctgctgccagaggcagaggagatagccatgatcagcatccagctagcagctaggttc
ctcttcagcaccgggttccacaccaagaaagtagtccgggggcccgctggtgactggtat
gacgccctgtgcatcctgctacgccacagtaagaacgtccgctgctggtttgcccacaat
gttctgtttgcgtaccccacgcgcttctctgagtacctgctggagtgtcccagtgccgag
gtccggggggccttcgccaaactcatcgtcttcatcgcccacttctccctggcggacggg
ccatgccccgcccccgccagctcccctgaggggtccacacagggctgtgataacctgagt
ctgagtgatcacctgttgagggctgtgttgaacctgctcaggagagaggtgtcagagcac
ggccgacacctgcagcagtacttcaacctcttcgtcatgtacgccaacctgggtctggca
gagaagacccagttgttgaagctgagtgtccctgctaccttcatgctggtggctctagac
gaggggcctggccctcccataaagtaccagtatgcagaactgaccaagctctacgctgtg
gtctcccagctactgcgctgctgtgacgtctccacacgcatgcagtcctccatcaatggt
aacccggccctggccaacccgtacggagacgccaacctgaccacccccatcatgcccctg
caacagctggtgtcagagatcctcttcgttaggaccagctacgtgaagaagatcatcgag
gactgcagcaactctgaggagacggtcaagctgctgcgcttcagctgctgggaaaacccc
cagttctcctctaccgtgctgtctgagctgctctggcaggtagcgtactcttacacatac
gagctgaggccttacctggacctgctgctgcagatactgctgatagaggactcctggcag
acccacaggatccacaacgtgctgaagggtataccagacgacagggacggcctgtttgac
accattcagcgctctaagaaccactaccagaaacgggcctaccagtgtatcaagtgcatg
gtggccctgttcagcaactgtactgtggcctaccagatactacagagtaacggggacctg
aagcgtaagtggacgtgggcggtggagtggctgggggacgagctggagaggaggccctac
acagggaacccccagtacacctacaacaactggtctccacccgtccagagcaacgagacc
tccaacgggtacttcctggagcgctcgcattccgcacgcatgaccctggccaaggcctgc
gaactttgccccgaggaggtacggaaggagccagatgatcaggaggcaacagaagatcat
gactcctcccctcccgaggacacagcgctgtacccccataaccctgctcctgccacacag
tttcagcagcagaacaaccacccccatgcccagccctatacgggtccggctgcccaacac
atgaacacgccccagcggcccccacagagagcacaggagagctgggagagcaccacagag
gaggtggggcccgtggcacccccgcccgctgtccagacggcaaaagagtaa
DBGET
integrated database retrieval system
