Salmo trutta (river trout): 115179745
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Entry
115179745 CDS
T08542
Name
(RefSeq) rho guanine nucleotide exchange factor 2-like isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115179745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115179745
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115179745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
C1_2
SOS1_NGEF_PH
CM_2
Myc_N
Motif
Other DBs
NCBI-GeneID:
115179745
NCBI-ProteinID:
XP_029597325
Ensembl:
ENSSTUG00000010367
LinkDB
All DBs
Position
3:complement(55998995..56069294)
Genome browser
AA seq
1263 aa
AA seq
DB search
MPVAIEDSPTDALEHAREMITTPPHSPRLPGSPSYLGGRCVPCPAPPPSSPCPSPPSSPS
SGGVTLRRIPSYCLTHNLDHLRRHSWQPGAMMYGCPPQYQQRSVSLEGFDTEEMERVLLG
ALEGFSRGGRDPRRAPITSYGQELGSLLSLTEEEACCQTQLFSPFEEQLSQLQGFSASAP
SLSASPSLRQLPKANLHPPTHAHTHTHSPTPHTHPYTHSQNHQHHQHQPCHRSYSNSNSI
SQRHYQESSLGSVFGGSTQSVDAELGELWGQEERQRLGEERERRREERRTEGLRGAPPGE
ERGEKTGSPLGRTFSFLRKMAGQRKNKEKERMKEREKEAREREARYSNGHLFTSLTVSAT
TLCSACNKSITAKEALSCPTCNVTIHNRCRDTLANCAKMKQKQQKLALVRNSSALPNVAL
RTKTPMMKERPSSAIYPSDSLRQSLLGARRVRSGLSLSKSVSTQNLAGNLNDDSPLGLRR
ILSQSTDSLNFRNRAMSMESLNDEGEVYYAAMLEELEREGKDFEADSWSRAVDPSYLQTH
RKDVIKRQDVIYELIQTEFHHVRTLRIMEGVFRQGMLDEVLLEPGVAHAVFPCLEQLMAL
HTRFLSQLMTRRTHSLAPGSTTNFTINQLGDILTEQFSGQCADEMRKAYAEFCSRHPKAV
KLYKELLARDKRFQHFIRRVSRGPLLRRHGIQECILLVTQRITKYPVLIQRILDNTKGSE
EEAQSLAQSLSLIRDLLSSVDQQVAELERTQRLQEIRARLDPRAQAEVRGGGVFRGGELL
RRTLLHEGTLLWKTQGSRLKDVQVLLMTDILVFMQEKDQKYLFPCIDKPAVLSLKNLIVR
DIANQERGMFLISDSTPPEMYELHGASRDDRNNWMRLIQQTVSSCPSREDFPLIETEDKA
LLRRLRADIQQKDREVLELLQERVTLFSDLAEVTGGGQEVTPPTNSRNIFRADTPYAPQA
EYLLTDAISEVDRLSELLLGSNIELPNGSTNGTNGDQNNKGAPVSNGDSISVNGTHEIKG
SPVSKDRNGNQLQDRPLNEEVCQRLVNLSAHLHSLQAAVIHQDSVLELRLHEGTGPASSG
SPTPTPPNSFPRLCRSMSRDTGLDAGTVAAMGEMAKLQKQHDLLQEEVVRLRPLEARLRE
CERARAQLEQQIRDNKGRRGRRGRRGSRGSNEDIVVDVTALEQAPAKRRGSGDGEPSPVA
PLACQEPVDQLDGVQEGSEEEEEEESEEEADVVKVSPRSDSPRDLQDIPEESECGPEAQE
SKG
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgccatagaggactcaccaacagacgcactcgagcacgcaagagagatgatc
accactcctcctcactcccctcgtctcccaggctccccgtcatatctgggaggccgctgc
gtcccatgtccggcccccccaccctcctccccttgcccctcccctccctcctctccctcc
tctggaggggtgacactacgtcggatcccctcctactgtctcacacacaatctggaccac
ctccgcaggcacagctggcagcctggagccatgatgtatggctgccccccgcagtaccag
caacgcagtgtgagtctggagggttttgacacagaagagatggagcgggtgctccttggg
gccctggagggcttcagcagaggggggcgggaccctcgccgagcccccatcacctcctat
ggccaggagctgggctctctgctgtcactcacagaggaggaggcgtgctgccagacccag
ctcttctccccatttgaggagcagttgtctcagctgcagggcttcagtgcctccgctccc
tccctgtctgccagtcccagtctgcgccagctacccaaagccaacctccaccctccaacc
cacgcacacactcatacacactctccgacacctcacacacacccctacacacactcacaa
aaccaccagcatcatcaacatcagccttgccatcgctcctactcaaactccaattccatc
tcccaacgccactaccaagagtcatccctgggctctgtatttgggggttccacacagagt
gtggatgcagagcttggtgagctgtgggggcaagaagagaggcagcggctaggtgaagag
agagagaggcggagggaggagagaaggacggagggactgaggggtgctccccccggggag
gagaggggggagaagacgggaagccctctgggacgcaccttcagcttcctgcgcaagatg
gccggccagcgcaagaacaaagagaaggagcggatgaaggagagggagaaggaggcgcgg
gagcgggaggcgcgctacagcaacggccacctcttcacttccctcaccgtgtctgccacc
accctctgttccgcctgcaacaagagcatcaccgctaaagaggccctcagctgccccacc
tgcaacgtcaccatccacaaccgctgtcgagacacactggccaactgtgccaagatgaaa
caaaagcaacagaagctagccctggtgaggaacagctccgcgctgccgaacgtagctctg
aggaccaaaacccctatgatgaaggagcggcccagctcagccatctatccgtccgacagt
ctccgtcagtccctgctgggtgcccgccgtgtccgctctggcctctccctctccaagagt
gtctccacacaaaacctcgcagggaatctgaatgacgactcgccgttggggctgcggagg
atcctgtctcagtccacagactccctgaacttcagaaacagagccatgtccatggagtcc
ctcaacgacgagggggaggtgtactatgctgccatgttggaggagctggagagggagggg
aaggactttgaggctgactcatggagccgggccgtagacccctcctacctgcagacgcac
cgcaaagacgtcatcaagagacaggatgtcatctatgagctgatccagacagagttccac
cacgtgaggaccctgcggatcatggagggggtgttccggcagggcatgctggacgaggtg
ctgctggagccgggcgtcgcgcacgccgtcttcccctgtctggagcagctgatggcgcta
cacacacgtttcctttcccagcttatgacacgacgcacacacagcctggcccccggaagc
actaccaactttactatcaaccaactgggggatatactgactgaacagttctcaggtcag
tgtgcagatgagatgaggaaagcctatgctgagttctgtagccgccaccccaaagctgtg
aaactgtacaaggaactgctggccagagacaagaggtttcagcactttatacggagggta
agccgggggcccctgctgcgtcgccatggcatccaggagtgcatcctgctggtgactcaa
cgcatcaccaaataccctgtcctcatccagcgcatcctggacaacaccaagggcagtgaa
gaggaggcccagtccttagcccagtccctgtccctgatccgggacttgttgagctctgtg
gatcagcaggtggcagagctggagcggacccagaggctccaggagatcagggccagattg
gacccccgggcccaggcagaggtcaggggaggaggggtgttcaggggaggggaactgctc
cgcaggacgctcctccacgagggcacgctgctgtggaagacgcaaggatccagactcaaa
gacgtgcaggtcctgctgatgacagacatcctggtgttcatgcaggagaaggaccagaag
tatttattcccctgcatagacaagcctgcagtgttgtctctgaagaacctgatcgtgagg
gacatagccaatcaggagcgagggatgttcctgatcagtgactccacccccccagagatg
tacgagctgcacggtgcctcacgagacgacaggaacaactggatgagactcatacagcag
acagtcagcagctgtccgtccagagaggacttccccctgatagagacagaggacaaggcc
ttactgcgccgactcagagctgacatccagcagaaggacagagaggtgctggagctcctc
caggagagagtgactctgttctctgacctggctgaggtcaccggtgggggtcaggaggtc
acgccccccaccaactctaggaacatcttccgggccgacaccccctacgcaccccaggcg
gaatacctactcaccgacgccatctcagaggttgacaggctgagtgagttgctgctgggc
tccaacatagagcttcccaacggtagcaccaacggtaccaatggtgaccagaacaacaaa
ggggcgccagtgagcaatggagattcgatctccgtcaacggaactcatgaaatcaaagga
agtccagtgtccaaggacagaaatggtaaccagctacaggacagacccctaaatgaggag
gtgtgtcagaggcttgtgaacctcagtgctcatctccactctctacaggccgccgtcatt
caccaggactctgtcctcgaactccgcctccatgagggcacaggccctgcctcctcaggt
tcccccacccccactcctccaaactccttccccaggctgtgccgttccatgtcacgtgac
acaggtcttgatgcgggcactgtggcagccatgggggagatggccaagctccagaagcag
catgatctgctgcaggaggaggtggtgaggctgcgccctctggaggccaggctgagggag
tgcgagagggcccgggctcagctggagcagcagatcagggacaataagggcaggaggggc
aggaggggcaggaggggcagcagaggcagcaacgaagacattgtggtggatgttacagcc
ttagagcaggctcccgctaaaaggagaggaagtggtgatggcgagcccagtcctgtcgcc
ccattggcctgtcaggaaccagtggaccaattggacggcgtacaggaaggcagtgaggag
gaggaagaggaggagtcagaggaagaggcggatgtagtgaaggtttcaccacgctccgac
agtccaagagatctccaggatatcccggaggagagcgagtgcggaccggaagcacaggaa
tccaaaggctga
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