Salmo trutta (river trout): 115179797
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Entry
115179797 CDS
T08542
Name
(RefSeq) CLIP-associating protein 1-B-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115179797
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115179797
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
115179797
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
115179797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Vac14_Fab1_bd
Sec7-like_HUS
Adaptin_N
Cnd1
MMS19_C
HEAT_DAAF5
ParcG
Paxt-1_C
ZapG-like
KH_DEAH11_1st
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
115179797
NCBI-ProteinID:
XP_029597435
Ensembl:
ENSSTUG00000048061
LinkDB
All DBs
Position
39:17914723..17952829
Genome browser
AA seq
1557 aa
AA seq
DB search
MEWNMEYCMEQVMQKDLGRRLQVGQDIIDSILDKDKSQDLEQDQTMLDRMVDGVATNWVN
SSNFKVALLGMDILTALVTRLQERFRTQIGTVLPSLIDRLGDSKDQVRDQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNNRTRESVCICLIATLNVYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMILSPVSDK
NYDDDDDSVDGGRSSSSKGPTSGKKAVSMGSFRRPGSASSTKSTGRDGPSAAAAGAVDEE
DFIRAFEEVSTMELFSNREMEDAMTKIREVLADDKRDWEHRVTALKKMRSLLLAGAVEFD
GFSQQLRLTEAAFKMSAKDLRSQVVREACITLGHLSFVLGNRFDHCAESIMPTLLTLVSN
SAKVMATSGIAVIRLIIRHTHYPRLIPIVTSSCQSKSVAVRRRCFEFLDLLLQEWQTNSL
ERNVAVLTETIKKGVHDADSEARSVARKCYWTFHGHFSREAEQLFQALESSYQKALQSHM
KSSDSILSLPASDRSSSSSQESLNRPQSAKSSMGNTVTRTKAAPARGPSTPRSLQRSRSD
VDVNAAATASAKSRMTPVPGSPAPFSAASALPPGSYASLDNTPGNIRPVGRVRTRRTSSG
SCVGASPSVIDSRGRSRAKMVSVSQPGSRSGSPGRLLSHTYGRISRATGGTTPAESRPKV
PRSHGCSRDTSPDRSGLDRLGLAHQARISASVNAMRILNTGTEVEAAVADALLLGDARNN
KRRPVRRRYESPGIYSDDDANSDASSACSERSYGSRNGGPPHYMRQTEDVAEVLNHCASS
NWSERKEGLLGLQNLLVSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITL
HREDVQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPFDQQFNILMRFIVDQT
QTPNLKVKVAILRYIECLARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKSFHHSW
AGEELSGRPSTTIASLPGEGNVEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGA
TKLLHSHLRNSSNTGVASPSNTMGRTPPPPRHPSSRSSPLTSPTNCSHGGLSPSRLWGWS
ADGLSKYPPPFPSPLSSTPAAPSLKTLRSAYSPSMSEYDTENLNTDEIYSSLRGVTEAIQ
NFSFRSQEDLMEPGRGKREDTPGVGTASHSGVDVVEGPGGRTALDNKTSLLNTPSPRSFS
GPRGRDYNPYNYSDTISAYDKAALRETVYEDDVEQLRDGRQECGGENKRLRTKNSSPAEQ
LELVGELLKELSNPSERPEERRGALVELLKIAREDSLAVWEEHFKTMLLLLLETLSDQDN
TIRALALRVLKEILRNQPARFKNYAELTIMKTLELHKDSHKEVVRAAEESASTLAGSIHP
EQCIKVLCPIVQTADYPINLASIKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSV
RKASVFCLVAVYSVIGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atggagtggaatatggagtactgtatggagcaggttatgcagaaggacctgggtaggaga
ctacaggtgggccaagacatcatagactccatcctggacaaggacaagtcccaggacctg
gagcaggaccagaccatgctggacagaatggtggatggtgtcgctaccaactgggtcaac
tccagcaatttcaaggtggctttgttgggaatggacatactgacagctttagtaacaaga
ctacaggaacggtttaggacacagattggaactgttttgccgagcttgatagatcgacta
ggcgactcaaaggaccaagtccgagaccaggaccaagctctcctgctaaagatcatggac
caagccgctaacccacagtatgtatgggaccgaatgttagggggattcaaacacaagaac
aacaggaccagggagagtgtctgcatttgccttatcgccacgttaaatgtatatggagct
caaggcttgaccctcagcaaaattgtcccccacatatgtaatcttttaggagaccctaca
agccaggtgcgagacggggccatgaactgtcttgttgaaatctacagacacgtcggggag
agggtgcggatggacctggggaaaaaaggactgccacagtcacggttgaatgttattttc
agtaaatttgatgaagttcaaagatcagggaacatgatcctgtcccctgtctcagataag
aactatgatgatgatgatgattctgtggatggggggcggtcctcctcttctaagggcccc
acgtcagggaagaaggcagtgagcatgggatccttccgcaggcccggctctgcttccagc
accaaatcaacagggagagatggtcctagtgcggctgctgcaggggctgttgatgaggag
gactttatccgtgccttcgaggaagtgtccactatggaacttttctccaacagggaaatg
gaggacgccatgaccaagatcagagaggtgctggctgacgacaaacgagactgggagcac
agagtcactgcgttgaagaagatgcgttctctgctcctggcgggagcggtggagtttgac
ggtttctcccagcagctgcgtctcacggaggcagccttcaagatgtctgctaaagacctg
cgctctcaggtggtcagagaggcctgtatcactctgggccacctgtccttcgtcctgggg
aacaggtttgaccactgtgcagagtccatcatgcccactctcctaaccctggtctctaac
tcggccaaggtcatggccacatccggcatcgctgtcatacgactcatcatcaggcataca
cactaccctcgtctcattcctatcgtgaccagcagctgccagtccaaatctgtggccgta
agaaggcgctgttttgagtttttggacctcttgctgcaggagtggcagaccaactctcta
gagaggaatgtagctgttctgacagagaccatcaagaaaggagtccatgatgcagactcc
gaggccagatcagtggccaggaagtgctactggacgttccacggccacttcagccgggag
gcggagcagctgttccaggctctagagtcgtcctatcagaaggctctccagtcccacatg
aagagttctgacagcatcctgtccctccctgcctcagaccgctcctcctcctcctcacag
gagagcctcaaccgccctcagtctgccaagagctccatgggaaacaccgtgaccaggacg
aaagcggctcccgccagaggtccctccaccccgcgctctctccagcgttcccgtagcgac
gtggacgtgaacgctgctgccaccgctagtgccaagtccaggatgactccagtgcccggc
tcgcctgcccccttcagcgctgcctcggctctgccacccggctcctacgcctctctagac
aacacacctggtaacattagaccagtgggccgtgtgcgcaccaggagaacgagttcgggg
agctgcgtgggggcgagtccctctgtcatagacagtagggggaggagtcgagccaaaatg
gtgtcagtgtctcaacctggcagtcgttctggctcccctggtcgtctcctgagccataca
tatggcaggatctccagggccactggagggacaacgccagcagaaagcaggcctaaagtc
ccccgcagccatggctgcagccgagacaccagtccagacagatcaggcctggaccgtcta
ggtctggcccaccaggcccgtatctcagcctctgtcaacgccatgaggatcctcaacact
gggaccgaggtggaggcagctgtagccgatgccctgttactaggagacgccaggaacaac
aagcggcggccagtcagaaggcggtacgagtccccggggatctactcagacgacgacgct
aacagcgacgccagcagcgcctgctctgagcgctcgtatggctcgcggaacggcggcccg
ccccactacatgagacagacggaggacgtggccgaggtgctgaaccactgtgccagttcc
aactggtctgagaggaaggaggggctgctgggactgcagaacctgctcgttagccagaga
attctcagtcgtgtggagctgaagagattgtgtgagatcttcacaaggatgtttgctgac
ccacacagcaagcgagtgttcagcatgtttctggagaccctggtagacttcatcaccctg
cacagagaggacgtgcaggactggctgtttgtcctgctcacccagctgctgaagaagatg
ggagctgacctcctggggtccgtacaggccaaggtccagaaggctctggacgttaccagg
gaatcattcccgttcgaccagcagtttaacatcctgatgcgtttcatcgtggaccagacc
cagacccccaacctgaaggtcaaggtggccatcctgaggtacattgagtgcctggcccgt
caaatggaccccgcagactttgtcaactccagcgagacgcgcctggccgtctcccgcatc
atcacctggaccacggaaccaaagagctccgacgtcaggaagagcttccaccatagctgg
gcaggtgaggagttgtcaggcaggcccagcaccaccatagcctctctacctggagagggg
aacgtggaggagaggtgcaagcaggcggctcaggtggttctgattgccttgtttgagctg
aacaccccagagttcaccatgctgctgggggccctgcccaagaccttccaggacggagcc
actaaactcctgcatagccacctccggaactccagcaacaccggcgtggcttctcccagt
aacaccatgggacggactcctcccccacctcgccaccccagcagtcgcagcagccccctc
acctctcccaccaactgctcccatggggggctctctcccagccggctatggggttggagt
gctgatggcctgtcaaagtaccctcctcccttcccttctcctctctcctccacccctgct
gcaccctccctcaagaccctacgaagtgcttactctcccagcatgtcggagtacgacaca
gagaacctgaacaccgatgagatctatagctccctgcgaggcgtcactgaggccatccag
aacttcagcttccgcagtcaggaggacctcatggagccaggcagaggcaagagagaggac
acgccgggtgttggaacagcatcacactctggtgtcgacgtggtggaggggcccgggggt
cgcacggccctggacaacaagacctccctactcaacaccccctccccccgttccttctcc
gggccccggggccgcgactacaacccctacaactactctgacaccatcagcgcctacgac
aaggctgccctgagagagacggtgtacgaggacgacgtggagcagcttcgagatggccgc
caagagtgtggtggagaaaacaagaggctgcgcactaagaacagttcccctgcggagcag
ctggaactggtgggcgagctgctgaaggagctgtctaaccccagtgagaggccagaggag
aggaggggagccctggtggagctgctgaagatagcccgggaggacagcctggcagtgtgg
gaggaacacttcaaaaccatgctgctcctgctgctggagactctgtcagatcaagataac
accatccgggcactggcgctacgagtgctaaaggagatcttacgcaaccagccggcccgc
ttcaagaactacgcagaactcaccatcatgaagaccctggagctacacaaagactcccac
aaagaggtggtgcgggcagcagaggagtcagcctccaccctggccggctccatccaccca
gaacagtgtatcaaggtgctgtgtcccatcgtccagacggctgactaccccatcaacctg
gcttccatcaagatgcagaccaaggtgatagaacgcatcaccaaggagtccctacaccag
ctgctgcctgacatcataccaggactcctgcaggggtacgacaacacagagagcagtgtg
aggaaggccagtgtgttctgtctggtggctgtctactctgtcatcggtgaagagctgaag
ccctacctggcccagctcacaggaagcaagatgaagctgctgaacctgtacataaagaga
gcccagacgtccaccagcaacagcagcagctcctcagacatctcctcatactaa
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