Salmo trutta (river trout): 115179846
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Entry
115179846 CDS
T08542
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115179846
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
115179846
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
23S_rRNA_IVP
Motif
Other DBs
NCBI-GeneID:
115179846
NCBI-ProteinID:
XP_029597548
Ensembl:
ENSSTUG00000046182
UniProt:
A0A674E671
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Position
39:13308840..13323351
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AA seq
899 aa
AA seq
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MGLKDHPEEDGAGRILDLGLDLEYLHIEGSVSRKAGADTGPSVERGEEEEEACEGSGSCS
LSTPGGKEGEVVGEESAGFDSDPEPARNSTGSNPAGGVSVSELDGGVPVPNTHQPLCRTP
CVDLGSEGPPDPPSGEPSPGEALREYQSKLEFALKLGYAEELVRLVLAKLGPYTLINDIL
GELVKLGRKAETNQQLTGSTASQPGPSSCSSSSSSSTCGYVEAVEAQQGRSDSPYQTDLL
LGDKDNLRPVVLDGSNVAMSHGNKEVFSCYGIQLAVDWFLERGHRDITVFVPSWKKEQSR
PDALITDQDILRRLEKDKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRD
LASEKPEWKKLIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPIMPEHKKQPCPY
GKKCTYGHKCKYYHPERSAQCQRSVADELRASAKTSATSTSAKGQAGEAGLVKSHSVPNN
VAMGTKRGSAPKRQCDPSIRALSYGEAEDKLRHAEKCNSLSSSSGSSCCSGSVTLSPAPG
GPPSSALSDPQEQPPSLGRDTPYMTLPPPHPDPYSSSCDPPDQSYYSVTPVHSGLAARRS
PMSRFPLDTDLRLLGSSDCGDSGCDSYGERASCLCCPGPLLDKYIHHQHHQHHQHNRLYS
QHSAPLLDPHPSPHTSVLHGYHQSLARGHSFPHHEPPDPHLKRPLYPLPPPLQHQAVGAR
SSCPGDYPSVSQSGPYPAGSPLGRCLANTRLETLSDSRLYERSPLPPRKAFSWDPYCGQP
PQSRYETYQSLPETHDVGWGHTSPWGQTTHSYHPPHPPYPSQPPHPSHAPQPSHPSMPPH
HMHQEPPALSRYGEVRGKVYLNLCNIFPSELVGRVMGRNPQVTDAQQLAAAILAEKSGY
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatccggaggaggatggagcaggccgcatccttgacctggggctg
gatttagagtacctccacatcgaaggctccgtcagcaggaaggctggcgccgatacaggg
cccagtgtggagcggggcgaggaggaggaagaggcctgcgagggcagcggcagttgcagc
ttgtccacgcctggggggaaggagggggaggtggtgggggaggagagcgctgggttcgac
agtgacccggagccagcccgaaacagcaccggttctaacccggctggaggagtgtccgta
tctgagcttgatggaggtgtgcctgttcccaacacccaccaacctctgtgcaggactccc
tgtgtggacctggggtccgaggggcctcctgaccctccgtcgggggagccttcacccggg
gaagctctgagggagtaccagtccaagctggagtttgccctgaagctgggctacgccgag
gagctggtgcggctggtgctggccaagctggggccgtacacgctcatcaacgacatactg
ggagagctggtcaaactgggccgtaaggccgagacaaaccaacagctgactgggtccacg
gcttcacagcccggcccctcctcctgctcctcctcttcctcctcttctacctgtgggtat
gtggaggcagtggaggcgcagcaggggaggtcagactccccctatcagacagacctcctc
ctgggggacaaggacaacctgcggcccgtcgtcctggacggtagcaacgtggcaatgagc
catggcaataaggaggtgttctcctgctacggcatccagctggctgttgattggttcctg
gagcgaggtcaccgtgacatcactgtgtttgtgccgtcctggaagaaagagcagtcccgc
cctgatgccctcatcacagaccaggatatcttacgtcgtctggagaaggacaagatcttg
gtgttcactccatctcgtcgggtccagggtcgccgggtcgtctgctacgacgaccgcttc
atcgtcaagctggcctacgagtccgacggcatcatcgtctccaacgacaactaccgcgac
ttggccagtgagaagccagagtggaagaagttaattgacgagcggctgctcatgtactcg
tttgtcaatgacaagttcatgcctcctgatgaccctctaggtcgtcatggtcccagtctg
gagaacttcctgaggaaacgtcccatcatgccagagcacaagaagcagccctgtccttac
ggcaagaagtgcacttacggccacaagtgtaagtactaccacccggagaggagtgcccag
tgccagcgctcggtggcagacgagctgcgtgccagcgccaagacctctgccacctctact
agcgccaagggccaggctggcgaggccgggctggtgaagagccacagcgtgcccaacaat
gtagcgatgggcaccaagagaggttctgcccccaaaaggcagtgtgaccccagcatccgg
gcgctgtcctacggcgaggcagaggacaagctgagacacgctgagaaatgcaacagcctc
agtagtagtagtgggagtagttgttgcagtgggagtgttactctgtcccctgcccctgga
ggacccccctcctctgccctcagcgacccccaggaacagccaccgagcctgggcagggac
acaccctacatgaccctgccgcccccccaccctgacccctactcctccagctgtgaccct
ccagatcagagctactactcagtgacgccggtccactctggtctggcagcacggaggagt
ccgatgtctcgcttcccgctggacacggacctgcgtctgctgggctcgtcagactgtggc
gacagcggatgtgactcgtacggagagagagcctcctgtctgtgctgccccggccctctg
ctggacaaatacatccaccatcagcatcatcagcaccatcaacacaaccgcctgtactct
caacactctgcccccctgctcgacccccacccctccccccacacctctgtcctccatggc
tatcaccagagcctggcacggggccacagcttcccccaccacgagccccctgacccccac
ctgaagcgccctctgtaccccctcccgcctcccctccagcaccaggccgtaggcgcccgc
tccagctgccctggagactacccctctgtgtcccagtccggcccctaccctgctggctcc
cctctgggccgctgcctggccaacacgcggctggagacgctgtcagactcccggctgtac
gaacgctccccgctgccccccaggaaagccttctcctgggatccctactgcggccaaccc
cctcagtcccgctatgagacctaccagagtctaccggagacccacgatgtaggctgggga
cacacatctccatggggacagaccacacactcttaccacccccctcacccaccctacccc
tctcagccccctcacccatcccatgcccctcagccatcccacccgtccatgcccccccac
cacatgcaccaggagccccccgccctgagccggtacggggaggtgcgggggaaggtctac
ctcaacctgtgtaacatcttcccctctgagctggtgggccgggttatggggaggaacccc
caggtgacggacgcccagcagctagctgccgccatcctggctgagaagtccggctactga
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