Salmo trutta (river trout): 115179866
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Entry
115179866 CDS
T08542
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115179866
Membrane trafficking [BR:
stru04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115179866
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
115179866
NCBI-ProteinID:
XP_029597604
Ensembl:
ENSSTUG00000014271
LinkDB
All DBs
Position
3:56283232..56328054
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AA seq
1500 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGSAPLDEEGQQRGGRVVEPVTDLVVIARGLGEEVPEGFT
CIEKTQGGHPAELSAGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWYVIETTP
YSRSASLSFGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAAHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKHGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKSDVEKPEEVRLI
DLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDQPQDQLRVPTKGSA
PSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRAL
QTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYAY
YNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPVRQRQKSGSVGSRTDTMDSDQRS
RPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTDKSKLSMKAVLRNAGANGC
SDPASRKPPVGPRDTSTPSPFPPGGVLVRRDQVCLSNFYKDCAETADSDPDCSCQPGERD
GRPPGPRDTVSRKAVDENYNNVSPPSRGSLTGKLQQLLTPTRHRVSGRRAASVDARRSGG
ENGPVHRVSEQRQSRKAQVAESLLKAKERLYNATSESSLSVGSDVDLPDTTNLAFPLRKS
WDTNQEGAGLQVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLNA
EICDLGPISSAHHSLERTNWNTEEEVESAAKPPGGQEAILGHNGVSEDSSSETSSYSESS
SATMGSSVGESPQVTVAYLSPLVLRKELESLLENEGEAVLAQGQLLDSHSIIFWNLVWYF
HRLGLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDHWPPLYILWRIHSGV
PMRNHSWRRHNHPFTLAFLEEVLRWVGMNEVHKGITLFLETIAKHPGTPKIQRSLYREML
FLTLAAMGRDHVAAFDKKYKAAYQRLSGSLGRGELRRKRAQPPSPKAVDCRRSFLLPLEC
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgcccccagctagtggactactttgtggtggcagggctggctccg
gggggctcggccccactggacgaagagggccagcagagagggggccgggtggtggagccc
gtcacagacctggtggtgatcgcccggggcttgggggaggaggtgcccgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgagctgagcgccggactcatcaacaac
ccccacatgtacctgtgttaccgccgtgggcatgacaagccacccatcctcgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggtacgtgatcgagaccaccccc
tacagccgctcagccagcctgagcttcggggggcccgccacccaccgcaccttcctgact
taccgccgggccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
cttctgcccagcaagggggaggtggccgcccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacctgtgctacaagagagctgtagccaaagcc
aatgccctagtctatgaagcaggtctgatcagtcggtatccggaagcggacgtggagtcg
ttccccctgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagc
tggcccctcaacaccaagtaccagctccctgtcttctctaccttcgtcctcactagcgcc
tgtggcgacaaggtttacggtgctgccatccagttctacgaggcgttcccacgggagtgc
ctctcggagcggcagagtgtccgtctgggcctggtgagcgtggtggaccggcggcctatc
accaaccgcaccctgcaagtgaagaagagcgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcacctttgtctaccgatactccatctccggaccccacgtg
ctgcccctcgagaagcacatctccagcttcatgcacaacgtcccgttcccttcccctcaa
cggcctcgcatcctagtgcagctctccccctatgacaaccttctcctctgtcagcctgtc
tcctcccccttactgctcagtggtgccagctttgtgaagctgctgcagaacctgggccct
gagaacgcctgtgtcctgctgctggccgtgctgacggagcacaaactactgctccactct
ctccgccccgacgtcctcacctccgtcagcgaggccctggtgtctatgacgttccctctg
cgttggcactgcccgtacatccccctgtgcccgctgcggctggcagacgtactgtgtgcc
cccatgcccttcatcgtgggtgtccactccagctactttgacctctatgacccccctact
gatgtggtgtgtgttgacctggacaccaacaccatctttcaagcagaggacaagaagccg
ttgtcatggcgatcgctaccaaggaagcatggcaagatgctggtgaataccctcaccaac
ttgatgaagactctggagaaaatctacaccactggccaagaggaggccaccctggagttc
ctgctgacggactatgacttgatctacgggcgtcagaagcagctggagctggagatccag
gaggccttcctgcgcttcatgagctgcttgctgaggggctaccgcgcctacctgctgccc
atcacccaggccccctcagacaggaccaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtctcgtgaacgcacccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaggagtgctcatttgtcagtgaccgccacgcctgtctggag
ttcttcgacgagtgtgtccagaagtcggatgtggagaagcctgaggaggtgcgtctaata
gacctggatgaggcccacagtggggagcacacagtcttcatcatgcccccagaggaaccc
caggagccagacggttcagagtgccccactcactacagctatgagacgttccctgtgctc
tgcatggatctgtttgaccagcctcaggaccagctacgtgtccctaccaaggggagtgcc
cccagcagccctgctccacggcggactaaacaggagattaagctggcacagaagcgggca
cagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctatggg
ctgtggttcatctacctgcccacctttgtgcgggcggagagtgccaaggtgcgtgccttg
caaacggcatacgaggtgctcaagcacatggagaccaggaaggtggtactaccagatgag
gtgtgttacaggatcctgatgcagctgtgtgggcagtacgggcagcctgtgctcgctgtt
agggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgcatac
tacaacaaggcagtgctggagagcaagtggccctccaccaatcagggtggccgtctgcgc
tgggccaagttgcgtaacgttctgatggccgtggcgcagttcagacagccagtcagacag
cggcagaagagtggttcagtaggctcgcggacagatacaatggacagtgaccaacggtcc
cgcccacaatctaacctgattcgtcagtccagctggagcggcctgagtgaaagctccagc
cacgaatcgctgacggggtctatggtgaagagcaacagcctgaacagcatgagaggctca
acagacaagtctaagctctcaatgaaggcggtgctccggaacgcaggtgccaatggctgc
agcgatcccgcctcccgtaaaccccccgtggggccacgagacacatccaccccttctccc
tttccccctggtggtgtcctggtgcgccgcgaccaggtgtgcctgtccaacttctacaaa
gactgtgccgagacggccgactctgacccagactgcagctgccagcctggggagagagac
ggcaggccacctgggcctagagacactgtgagccgcaaggccgtggacgagaactacaac
aatgtgtcaccgccgagtcggggcagtctgacggggaaactgcagcagctgctcacgcct
actcgccatcgagtctcggggcggcgggccgccagtgtagacgcccgacgctcgggggga
gaaaacgggccggtgcacagggtgtcggaacagagacagtcccgaaaagcccaggtggct
gagagcctactgaaggctaaggagaggctctacaatgctacctctgagagttctctgtcg
gtggggagtgacgtcgacctccctgacaccaccaatttggcctttcctctccgcaagtcc
tgggacaccaaccaagagggagcgggactacaggtgttgatgtcgagctgctccttgtgt
cggagctgtaactccctggtctatgacgaggagattatggccgggtggacgtctgatgac
tccaacctcaactccagctgtcccttctgctcgaccaccttcgtcccccttctcaacgct
gagatctgtgacctaggacccatcagcagcgctcaccacagcctggaacgtaccaactgg
aacacggaggaggaggttgagagcgcagccaagccccctggtggccaggaggccatcctg
ggtcacaacggtgtgagtgaggactccagctctgagaccagcagttattctgagagcagc
agcgctaccatgggttcatcagtgggcgagtctccccaggtgacggtggcctacctgagc
ccattggtgctgcgcaaggagcttgagagcctgctggagaacgagggcgaggcagtgctg
gcacagggccagctcctggacagccactccatcatcttctggaacctggtgtggtacttc
catcgcctgggcctgcccagcaacctgctgcagctggttcgctcctcaccgctggccaac
caactagcacagacttcagagaactcagcagtgagggtgaggctgctgtgggacacactg
acccctgacacagaccactggccccccctctacatcctgtggaggatacacagtggcgta
cccatgcggaaccacagctggcggaggcacaaccaccccttcaccctggccttcctggag
gaagtgctgcgctgggttggcatgaacgaggtacacaagggaatcaccctcttcctggaa
accattgccaagcacccaggcacgcccaagatacaaaggagtctgtacagagagatgctc
ttcctcacgctggctgccatgggtagagatcacgttgctgcgtttgataagaaatacaag
gctgcgtaccaacggctgagtggctccttgggtcgcggggagctccgcaggaagcgagcc
cagccacctagccccaaggctgtggactgcagacggagcttcctgctgcccctcgagtgc
tga
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