Salmo trutta (river trout): 115179869
Help
Entry
115179869 CDS
T08542
Name
(RefSeq) alsin-like isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115179869
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
115179869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
MORN
VPS9
PH
RhoGEF
Motif
Other DBs
NCBI-GeneID:
115179869
NCBI-ProteinID:
XP_029597603
Ensembl:
ENSSTUG00000046283
LinkDB
All DBs
Position
39:17754729..17775406
Genome browser
AA seq
1773 aa
AA seq
DB search
MKKWTWSGDRAEFRNGFGVFQVEFHQSMHQHCHGQISVMESQRKSSGEEDSSGERGLLHT
WKGYSYSVTPERVLLSRPVLQAALGTRHGVLLVEGGQVYSFGEFPWKQSQVSEVGPLKPV
LESALSGQRVVAVAAGSFHSGAVTEDGGVHMWGENSFGQCGLSSLTVVPNPTPVAVLDPD
TSPPHTIRVLELACGEQHSLALSAQHEVWAWGSGCQLGLVTTIFPVWKPQKVEHLAGRHV
LQVACGAFHSLALVRCQPPQEARRPLPDKCGQCNQLLYTMTDKEDHVIISDGHYCHLGVE
LLADGEARLGPGRSPPLGLQSSPSEPLLSSHTSASAPGPYPTITDHTDNERGRTVAQNGE
VLTTTDSDISAAGTDSDRTVGGVGGAGSQNSPYPDDQAVKEYLKKLSDTSLAEETAKMTI
AGASFQPPADSLDLLTSDLIPGVMPVTTSSALNSLVSSCASAVGERVVSTYEALSLKKMI
NYYYPGVGGVAGVPGGVPGGFPGGRAEERVGLEESMQGKKSCSTGDIREEEDEGLSRRLS
LPGLLSQGRYAVRLLSSTSAHRLLSSLTSSYTLMLSPRLMRRASRPRVRAVPLTPVGGLP
EAGELLPSLQTEVWSWGRGEEGQLGHGDNLPRLQPLCIKCLSSKEVVLVAAGAHHSLALT
AQSQVFSWGSNSSGQLGHMGCPTTIPRLAKLSEGIRVWDVGAGAQHTLLLADGDCYQPIL
YYSGQQVRDGAQDAPQDQTEGYSYTQQPVLLPFCMNLGYVSAVFAGGQSCVALADRNVMG
FIASLHELAAAERKFYCKLSSVKNHVLRPLLDLGENYRCRYSSAGQRPWVRESLSTALGP
ASTVLLQSLARGYSRLCHLTGQHSASLTANLRRRREVKSLVMLEHASIFLDTYTEYCCSV
GNFLVMGGFQALAKPSLDFFGKCPELLQRLAESSEENIPLSDLLVALFYLPMRHLHEYGR
LLLKLGTCFQVSSVDYQKLQDGCSKFEALALHLKRRRKEAEYTYHFWKSFPGKMTVSGLD
SLRKPRRRLICESSNKALTLQNSGRFSVNWFILFNDALVHAQGVVPYKSLFSTHHVFPLA
TLWVEPILEENTGLYGLKVISPEETFTLLACSSMEKAKWLRSINQAVDQAMRGAGQRAEP
PISRTASYTFYKDSRLKEATYEGHWLAGKPDGRGMMKWLDGRIYTGTFKNGLEDGFGDYV
IPSKTLNLNDHYQGHWKEGKMHGIGTYKYATGEFYEGSFQDNMRHGHGMLRSGTLNSSSP
SVFIGQWVHDKKTGYGVFDDITRGEKYMGMWQDDQRQGTGVIVTQFGLYYEGAFNNNKMQ
GTGVLLSEDNTTYEGEFSEDWTLNGKGVLTMANGDYFEGSFTGEWSSGLKVTGSFFKPNL
YDSDGDKGRAVKLGRLAVRPEEKWRAVFEECWMRLGCEAPGQGENQRAWENIAEALTTSR
RQHGDSPEMNLSQTHNRTLGSLEFIPQQHVGPVTMEKYDRIRHYLIKACDTPLHPLGRLM
ETLVAVYRMTYVGVGANRRLLLQAVNEIMSYLARIFQLVRFLFPDLPEEGGAIPEPSSDP
QDKKDSNCADTQLESPKPGRVVSSSALLLPVLLPGLYPPLFTLYVLEKEREDDVYWECVL
RLNKQPDMALLAFLGVQHKFWPVSVPVLGEKTEVVSSTKDACFASATETLQQIRQFVFST
TFTPSDKLQVIQLTFEEITKEVMSSLEGNFLWSMDDLFPVFLYVVLRARIRNLGSEVSLI
EDLMDPCVQHGEHGIMFTTLKACYYQIQHEKTT
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatggacatggtcaggggaccgggctgaatttagaaacggatttggagttttt
caagttgagtttcaccagtctatgcatcagcattgccatggacaaatctcagtgatggag
tcccagaggaaaagctctggtgaggaggacagttcaggggagcgaggtttgctccacact
tggaagggctactcctatagtgtcaccccagagagagtgctcctgtccaggcctgtgctg
caggctgccctgggaacacgccatggggttctactggtggagggcgggcaggtgtacagc
tttggtgagttcccatggaaacagagccaggtctcggaggtgggccccctgaagcccgtc
ctagagagcgctctcagcggccagcgcgtggtcgccgtggcagcgggcagcttccacagc
ggggcggttaccgaggacggcggggtccacatgtggggggagaactccttcggccagtgt
ggcttgtccagcctcactgtagtccccaacccgactccagtggctgtcctggaccccgac
accagcccccctcataccattcgggtcctggagctggcctgcggggagcagcactccctt
gctctctctgcccagcacgaggtgtgggcctggggcagcggctgccagctgggcctggtc
accaccatattccccgtgtggaaaccccagaaggtggagcacctggcaggcagacacgtc
cttcaggtggcctgtggggccttccacagccttgccttggtgcgttgccaaccccctcag
gaggcccggcggcccctgccagacaagtgtggccagtgcaaccagctgctctacaccatg
acggacaaggaggaccacgtcattatctcagatggtcattactgccacctaggggtggag
ttgctggctgacggagaggccaggctggggcctggaaggtcccctccgctagggcttcag
agctccccttcagagcccctcctctcctctcatacctcggcctcagcgcctggtccctat
cccaccataacagaccatacagacaatgagagggggaggacagtggcacagaatggggaa
gtcttaaccaccacagactctgacatctctgctgctgggacagactctgatcgaactgtt
ggaggtgtggggggtgcagggtctcagaactccccctaccctgatgatcaggcagtgaaa
gaatatctcaagaaactgtctgacacctctttggctgaggagactgccaagatgaccata
gcaggagcaagttttcagcccccagcagatagccttgacctcctgacctctgacctcatc
cccggggtcatgccagtgaccaccagctctgccctcaacagcctggtctcatcctgcgcc
tccgccgtgggcgagagagtggtctccacctacgaggctctgtccctgaagaagatgatt
aactactactaccctggggttgggggtgtagcaggagtacccggtggggtgccagggggg
tttccagggggacgcgcggaggagcgggtgggtctggaggagtccatgcaggggaagaag
agctgcagcacgggggatatccgtgaggaggaggacgagggcctgagtcgacgcctctct
ctgcctggactcctctctcagggtagatacgctgttcgcctcttatcctccacctctgct
catcgcctcttatcctccttaacttcctcctatactctgatgttgtcccccaggttgatg
cggagggccagccggcccagggtgcgagcagtgcccctcacccctgtgggagggctccca
gaggcgggggagctgctcccctccctgcagaccgaggtgtggagctgggggcggggtgag
gagggccagcttggccacggggacaacctccccaggctgcagccactgtgtatcaagtgt
ctgagcagtaaggaggtggtgcttgtggctgctggggcacatcactccctggccctgact
gcacagtcccaggtcttctcctggggtagtaacagctctggccagctgggacacatgggg
tgtccaactactatccctcgccttgccaagctgtctgaggggatccgtgtatgggacgtg
ggtgctggggcgcagcacaccctcctcctggccgatggggactgttaccagcccatcctt
tactatagcggacagcaggtcagagatggggcgcaggacgcaccccaggaccagacagag
gggtacagctacacccagcaaccagtgctgctccccttctgcatgaacttgggctacgtg
agcgccgtgtttgcggggggccagagctgcgtggcgctagccgaccgcaacgtcatgggt
ttcatcgccagcctccacgagctggctgctgccgagaggaagttctactgcaagctgagc
tctgtgaagaaccacgtactgcgccccctgttggacctgggtgagaactaccgctgccgc
tacagctccgctggacagaggccatgggtcagagagtcgttgagtacagccctaggcccg
gcgtccacagtgctgctacagagcctggcgaggggttatagccgcctgtgtcacctcact
gggcagcactccgcctccctcaccgccaacctgcgccgccgtcgggaggtgaaaagcttg
gttatgctggagcatgccagcatcttcctggacacgtacactgagtactgctgctctgtg
ggtaacttcctggtgatggggggcttccaggctctggccaagccctcgctagatttcttt
gggaagtgtccagagctgttgcaacggctggcagagtccagcgaggagaacattcctctg
agtgacctgttggtggcgctcttctacctgcccatgagacaccttcacgagtatggcagg
ctgctgctcaaactgggaacctgcttccaggtgagctcagtggactaccagaagcttcag
gacggctgctctaagtttgaggccctggctcttcatctgaagaggaggaggaaggaggca
gagtacacttaccacttctggaagagcttccctggcaagatgacggtcagtggcctggat
tccctgcgtaagccccgccggaggctgatctgtgagagcagtaacaaggccctgacgcta
cagaactctggaaggttctctgtcaactggttcatcctcttcaatgatgcactcgtccac
gctcagggtgtggttccctataaaagccttttctccacccaccacgtcttcccattggcc
acactgtgggtcgagcccatcctggaggagaacactggcctgtatggactgaaggtgatc
tcacctgaggagaccttcaccctgctggcctgttcttccatggagaaggccaagtggctt
cgctccatcaaccaggcggtggaccaggccatgaggggggcggggcagagggcggagcct
cccatctcccggaccgcctcctacaccttctacaaggacagccgtctgaaggaggccacc
tacgagggccactggctggccggcaagcccgatgggaggggaatgatgaagtggcttgat
gggagaatttacacggggacgttcaagaacggactggaggatggttttggagattacgtt
attcccagcaagacgttgaacctgaacgaccactatcaaggccactggaaagaagggaag
atgcacggcatcggaacatacaagtatgccacaggtgagttctacgagggctcgttccag
gacaacatgcgtcacggtcacgggatgctgcgcagcggcacgctgaactcctcctccccc
agcgtcttcatcggccaatgggtgcacgacaagaagacgggctacggcgtctttgatgac
atcaccagaggagagaagtacatgggcatgtggcaggatgaccagcggcagggcacgggc
gtcatagtaacccagtttggcctgtactacgagggagccttcaacaacaacaagatgcag
ggcacaggggtcctgctgtctgaggacaacaccacatatgaaggagagttctcggaggac
tggactctcaacggaaagggtgtgctgaccatggctaatggggactactttgagggctcc
ttcaccggggagtggagctccggcctgaaggtcaccggatccttcttcaaacccaacctc
tacgactcagacggggacaagggccgcgctgttaagctggggcgtctggcggtgcgtccg
gaggagaagtggagggcagtgtttgaggagtgttggatgaggctgggctgtgaggctcct
ggccagggagagaaccagagagcctgggagaacatcgctgaagccctgaccaccagcagg
agacagcacggagacagcccagagatgaacctgagtcagactcataacagaactctgggg
agtctggagttcatccctcagcagcatgttggccctgttaccatggagaagtatgaccgt
atccgccattacctcatcaaggcgtgtgacacgcccctgcaccccctgggcaggctgatg
gagaccctggtggctgtctacaggatgacctatgtgggggtgggggccaaccgccgcctc
ctactgcaggctgtcaacgagatcatgtcctacctggcccgcatcttccagctcgtcagg
ttcctgttcccagatctgcctgaggagggtggagcgatccctgaaccatcctctgacccc
caggacaagaaggattccaactgcgcagacacccagctagaatcccccaaacctgggcgt
gtagtgagtagctcagctctgctcctgccggtgttgctgcctggtctctacccccctctc
ttcaccctgtacgtcctggagaaggagagggaggacgacgtgtactgggagtgtgtcctc
cgcctcaacaaacagccagacatggccctgcttgccttcctcggagtgcaacataagttt
tggccggtttcggttccagtgctgggggagaagaccgaggttgtgtccagcacaaaagat
gcctgttttgcctcagcaacagagaccttacagcagatcagacagtttgttttcagcaca
acgttcaccccatccgacaagctgcaggtgatccagctgacatttgaggagatcacaaag
gaagtgatgtcatctctggagggtaacttcctgtggtccatggacgacctgtttcctgtg
ttcctctacgtggtactgcgcgcccggatcaggaacctggggtcagaggtgagtctgata
gaggacctgatggacccctgtgtacagcacggagaacacggcatcatgttcaccactctc
aaggcgtgttactatcagatccagcatgagaagaccacataa
DBGET
integrated database retrieval system