Salmo trutta (river trout): 115180006
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Entry
115180006 CDS
T08542
Name
(RefSeq) liprin-alpha-2-like isoform X1
KO
K26226
liprin-alpha
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115180006
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115180006
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
MAGI_u1
Motif
Other DBs
NCBI-GeneID:
115180006
NCBI-ProteinID:
XP_029597713
Ensembl:
ENSSTUG00000024089
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Position
40:9897736..10128579
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AA seq
1318 aa
AA seq
DB search
MMCEVMPTISEDTALSQRGSQSSASDPDSHFEQLMVNMLDERDRLLDTLRETQESLGLSQ
QHLEDVIYDRDSLQRQLSSALPQEFAALTKELNVCRENLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVS
LERVSALEEELTSANQEIVALREQNAHIQRKVASGDGSEDILEGTDASQKVHSKRLSNGS
MESAHEAGQVVELQDLLEKQNYELAQMKERMSSLSSRVSEVEQELDTARKDLIKTEEMST
KYQRDIKEVRREAMCQKEDMEERIVTLEKRYLSAQRESTSLHDISDKLENELANKEAFLR
QMEDKNRQLLERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEERMRH
LEGQLEEKHQELLRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNV
LIQDSEGYRKQYEDSIHEKTHLADEIDKLRSELDQFRLRTGSLTEPTLSRYGSHLDTSGE
LRFSLGSLAETQSDHYRSAKVIRRPRRGRMGLRRDESKAKSLGEHEWRSQQLGILGSHPF
ESEMSDMSDIDDDDRETMFSSMDLLSPGGHSDAQTLAMMLQEQLDAINKEIRLIQEEKES
TELRAEEIENRVASVSLEGLNLARMHHPGASITASATASSLASSSPPSGHSTPKLDHRST
TDMERMGIMTLPSDLRKHRRKIAATDDDGQDKATIKCETSPPPTPRTVRMTRTLPASSHN
EARGIAASLEAEASALSSVASSQDSINKQPKKKGIKSSIGRLFGKKEKTRLAQLHAHREA
IGQSQGVSDPDLGQDMAVGKLGTQAEKDRRLKKKHELLEEARRKGLPFAQWDGPTVVAWL
ELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSP
SAPPTSRTPSGNVWVTHEELETLAAPSSKTRSGESEEGSWAQTLAYGDMNHEWIGNEWLP
SLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMGLKKLNYDRKE
LERRREHSQHEMRDVLVWSNERVIRWVQSIGLKDYANILLESGVHGALVALDDNFDHTSL
ALLIQIPNQSTQARQILEREYNNLLALGTERRLDEYEDNDLRGPSWRRQFPPRDVHGISM
MPGSAETLPAGFRVTTGSHSRRLPPEVLYEALDDSPDDMYLDWFQGQIYWSYTMWPAVGL
CAFTPPKTPRFLLSTLPYLLSSPTVFTRYLYCSVPLFRSALEANYKGGHLFVKVVSLF
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggacacggcgctgagccagcggggctcc
cagagcagcgcctcggacccagactcccactttgagcagctgatggtcaacatgctggat
gagagagaccgcctgttggacacgctgagggagacccaggagagcctggggctgtcccag
cagcacctggaggacgttatctacgaccgggactcactgcagcgccagctcagctccgcc
ctgccacaggagtttgcagccctgaccaaggagctgaacgtgtgcagagagaaccttctg
gagaaggaggaggagatctccgagctcaaggccgagaggaataacaccaggttgcttctg
gagcatctggagtgcctggtgtccaggcatgagcggtcactacgcatgaccgtggtcaag
cggcaggcccagtccccctcaggcgtgtccagtgaggtggaggtcctcaaagcgctcaag
tccctgttcgagcaccacaaagccctagacgagaaggtgagggagagactgcgggtgtcg
ctagagagggtctcggcattggaggaggagctaacatcagccaaccaggagattgtggcc
ttacgggagcagaatgcccacatccagaggaaggtggcgtcaggggacgggtcagaggac
atactggagggaactgatgccagccagaaggtacatagcaagcgcctgtccaacggctcc
atggagtcggcccatgaggcgggccaggtggtggagctgcaggacctgctggagaagcag
aactatgagctggcccagatgaaggagcgcatgtcttccctctcgtcccgcgtctccgag
gtggagcaggagctggacaccgcgcgcaaggacctcatcaagacagaggagatgagtacc
aagtaccagagggacatcaaagaggtgaggagagaggctatgtgtcagaaggaggacatg
gaagagaggatcgtcactctggagaagcgatacctcagcgcccagagagagtccacctcc
ctgcacgacatcagcgacaaactggagaatgagctggccaataaggaagccttcctcaga
cagatggaggataagaacaggcagctgctggagcgtttggagctagcagagcagaagctg
cagcagaccatgagaaaggctgagaccctgccagaggtggaggctgaactagcccagagg
atagcagcactcaccaaggcggaggagcgccacggcagcatcgaggaacgcatgaggcac
ctggagggccagctggaggagaagcaccaggagctgctcagagctcggcagagagaaaag
atgaacgaggaacacaacaagcgcctgtcggacacggtggacagacttctcacagagtcc
aacgaacgtcttcagctccacctgaaagagaggatggctgctctggaagagaagaacgtt
ttaatacaagactcggaaggctacagaaaacagtacgaggattcaatccatgaaaaaact
catctggcagatgagatagacaagctgagatcagagttggaccagttccgactgagaaca
ggctcactcacagaacccactctgtcacggtatgggtctcacctggacacgtcgggggag
ctccgcttctccctgggctccctggctgagacccagtcagaccactaccggtcagccaag
gtcatccgcaggcccaggagaggacgcatgggtctccgcagggacgagagcaaggctaag
tcactgggggagcacgagtggcgctctcagcagctaggcatcctgggtagccaccccttt
gagagtgagatgtctgacatgtcggacattgatgacgatgaccgggagaccatgttcagc
tccatggacctgctgtcccccggcggtcactcagacgcccagaccctagccatgatgctg
caggagcagctggatgccattaacaaagagatacgactgatccaggaggagaaggagtcg
acagagctgcgggcggaggagatagagaaccgtgtggccagcgtcagcctggagggtctc
aacctcgcccgtatgcaccacccaggagcctccatcaccgcctcggccaccgcctcctcc
ctggcctcttcctccccgcccagcggacactccacccctaagctggaccaccgcagcacc
acagacatggagcgcatgggtatcatgacactgcccagtgatctgaggaaacacaggaga
aagattgcggccactgacgatgacggccaggacaaggctaccatcaagtgtgagacgtcc
cctccccccacgccccggaccgtacgcatgacccgcacactgccagcctcctcacacaac
gaggcccgaggcattgctgccagcctggaggcagaggccagtgctctgagcagcgtagcc
agcagtcaggactccatcaacaagcagcccaagaagaagggcatcaagtcctccatcgga
cgcctgtttggcaagaaggagaagaccagactggcacagctgcatgcccacagggaggcc
atcgggcagagccaaggagtgtctgatccagacctgggtcaggacatggctgtggggaag
ctggggactcaggctgagaaagaccgccggctgaaaaagaagcacgagctgttggaagag
gcgaggaggaaaggcttacctttcgcccaatgggacggccccacagtggtggcctggctg
gagttgtggctggggatgcccgcctggtacgtggcggcatgtcgtgccaacgtgaagagc
ggtgccatcatgtctgccttgtcggacacagagatccagagggagatcggcatcagtaac
cccctgcaccgcctcaaactacgcctggccatccaggagatggtctccctcaccagtcca
tctgccccgccaacctccagaaccccgtcaggcaatgtatgggtgacccacgaggaactg
gagaccctcgcagcaccctcctcgaaaacgaggtccggggagtccgaggaggggagctgg
gcgcagactctagcgtatggtgacatgaaccatgagtggatagggaacgagtggttgccc
agtctaggactacctcagtaccgcagctacttcatggagtgcctggtggacgcacgcatg
ctggaccacctcaccaagaaggacctccgggtgcatctcaaaatggtggacagctttcac
aggacgagtttgcagtatggtatcatgggtctgaagaagctcaactatgacaggaaagag
ctggagagacgcagagagcacagccagcatgaaatgagagatgtgctggtgtggagcaac
gagcgggtgattcgctgggtccagagcatcggtctaaaggactatgccaacatcctgctg
gagagcggcgtgcacggggccctggtcgccctcgacgacaactttgaccacaccagcctg
gcgctgctcatccagatccccaaccaaagcactcaggcacgtcagattctggagagggaa
tacaataacctgctagccctgggcactgagagacgactggacgagtatgaagataatgac
ctccgggggccatcgtggaggaggcagttccccccgcgggacgtccacgggatcagtatg
atgcccggctcggcagagaccctccccgctggcttccgcgtcaccaccggctcacactcc
cgtaggctaccccccgaagtgctctatgaggcgctggatgacagtcctgacgacatgtat
ttggactggtttcaaggtcagatatactggagctataccatgtggcctgctgttggcctg
tgtgcctttacgccccccaaaactccccggttcctgctgtccaccctaccgtacctcctc
tcttctccaactgtcttcactcgctacctctactgctctgttcctctgtttcgttctgcc
cttgaagccaactacaagggtggccatttgtttgtcaaggttgtcagtttgttttag
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