Salmo trutta (river trout): 115180025
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Entry
115180025 CDS
T08542
Name
(RefSeq) zinc finger protein 420-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115180025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115180025
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115180025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
TINF2_N
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
115180025
NCBI-ProteinID:
XP_029597758
Ensembl:
ENSSTUG00000044337
LinkDB
All DBs
Position
40:869784..880289
Genome browser
AA seq
1162 aa
AA seq
DB search
MQSQDPCENCPLLLPSLRLFIPPLRLVSAAMWQVVQRGDVQDYGMLEEFVTMVTEIVPEL
WSCSQRAQLLLGLRARLVLELCRTEQTLDLTNIQKHLDRIRSLTSTGEAESNDAEVQLSE
SNFVELVESLLKDPSERENFYQDVFPVEFGPKYDTAIQMLMLEFLSRFEKLLPIPDLEQT
ASLLNAVPSALEKCLQFVPDPIQLRTLLQYHRKLGHLDSIRTPSSFGDCILSSLSLPPYV
QVVTAPHVDSDTQSESMNLEGMEARELLEHRTKEIDVLVPADEVRRYIITEPDYSMDMES
AVGEIDNQAVTGLNLLRPSHFQQLKRSKRLQIMNIFSKRRKPRKIDSSVRAIKQPSSKVR
VSPKGRKPRKTDSSRRAIKQPSSSKGRPSPKKSCRRGPFSKTCEVCGKTFTRVTAMKRHQ
LTHTGDLKFKCLVCEKSFRDGHNLKRHQKRVCEKELNMLDEDKNEEEMPQPSTSKPQITS
LLKTPSPPGPSHLGTLDTITASNTCSVCGRYFARTSSLVRHMSSHSKERPFGCVNCDKRF
KYSYDLKKHQRELCQKMTQGDLCQDVGQNMAQQKSGPEPEKVFLATAENRTQIDSKTCYV
CGKILTCTSQMERHLKSHSKARPFNCAICERSFKYKDTLKKHQEILGHEGILEDFGQSVD
QQEVEVKTESCISHLTTKENDTEPLITATTSVPTLKEPKPCTVCGKIFNRASVMAIHMRS
HSDERPYQCGNCEQRFKYMHNLNQHQRYICKVNREESSQMVDQHQEEESSELLAVKADTP
ETSTGQLQLVHWCKKCGKCFDDICNLKQHQESSCKEEKIKVVFQCEKRKVVFKCDDCGKD
FKGSSSLRTHKRIHNPFYCSDCGRVLPNSIAFDRHKLMQHKEIQCTMCEKTFTLLGRLRD
HYLHQHKFTGPYPCSQCEKTFTQLRYLVEHERVHSGEYPYQCSVCQAKFNKANSLTIHSR
KHTGEKPFLCWQCGKSYKDRGNLSMHMGTHSEEKPFSCSQCDMTYRTKIQLNTHIEQVHE
GVRYTCAVCGKQFLKAVSLIRHELTHTGERPWPCSYCTKTFITANERRLHERYHTGERPY
KCQDCGKSFVQLCFLKSHQRLHTGEKPFACSVCDKRFRLNYHRQRHEQTHTGKQKPHVCA
ECGLAFAQRKRLTEHQCTHSLS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtcaggatccatgcgaaaattgtcctcttcttcttccctctctgcgtctcttc
attccaccactgcggcttgtctctgcagccatgtggcaagtggttcaacgaggagacgtt
caagattatgggatgctggaggagtttgtcaccatggttacagagattgtgccagagcta
tggagttgcagtcagagggcccaactcctcctggggcttagagcaaggctggttctggag
ttgtgtcgcactgagcagacattagacctcacgaatattcaaaaacacttggacaggatc
cgatccctcacatccactggggaagcagagtcaaatgatgcagaggtgcaattatctgaa
tcaaactttgtggagctggttgaatctctgctgaaagacccaagtgaaagggagaacttc
taccaggacgtgttccctgtggaatttgggcccaagtatgacactgcaatacagatgctg
atgttagaattcctttccagatttgagaagttacttcccataccagaccttgaacagact
gcctccttgttaaatgctgttccctctgccctggagaaatgtttacaatttgtacctgac
cccatacaattgaggaccctgctccagtaccacagaaaacttggacatttggactccatc
cgaactccatcatcctttggtgactgcatcctctcctctctgtctcttcctccatatgtg
caagtggtgactgccccacatgtagactcagatacacaatcagaaagcatgaatttggag
ggaatggaagcaagagagttgttggagcatcggacaaaggaaatcgatgtactagtccca
gcagatgaagttagaagatacataattactgagccagattacagtatggacatggagtct
gccgttggggaaattgacaatcaagctgtcactggcttgaatttactcagaccatcacat
tttcaacaattaaaacgaagcaaaaggctgcagattatgaatattttttcaaaacgacgg
aaacctcgaaagatcgattcctccgtgcgtgcaatcaaacagccatcatccaaggtgcgc
gtctcccccaaaggacgaaaaccacgaaagactgattcttccaggcgtgcaatcaaacag
ccatcatcctccaagggtcggccctccccaaagaagtcatgcagaagaggcccattcagt
aagacatgtgaagtgtgtgggaagactttcactcgagtcacagccatgaaaagacatcag
ctaacccacactggagatctcaagtttaagtgcctcgtgtgtgaaaaaagcttcagggat
ggtcataatctgaagagacaccagaagcgagtttgtgaaaaggagctaaacatgttggat
gaagataaaaatgaggaagagatgccacaaccctcaactagcaaacctcagatcacatca
ctcctcaagactccctctccaccagggccatctcatctaggaactctagacactatcaca
gcctctaacacatgctctgtgtgtgggaggtattttgctcgtacttcaagcttggtgagg
cacatgagctcccactcaaaagagcgtccatttgggtgtgtcaattgtgataagagattc
aagtattcgtacgatttgaaaaaacaccagagagaattgtgtcagaaaatgacccaggga
gatttgtgtcaggatgttggtcagaacatggcacaacaaaagagtggcccggaaccagag
aaggtttttcttgccactgcagagaatcgaacccagatagattccaaaacctgttatgtc
tgtggtaagattttgacttgtacctcacagatggaaaggcacttgaaatctcactcaaag
gcacgtccctttaattgtgctatttgtgagagaagttttaagtacaaagataccttgaag
aaacatcaggaaatccttggccacgagggcatcctagaagacttcggtcagagtgtggac
cagcaagaagtggaagttaaaacagagagttgcatcagccatctcactaccaaggaaaac
gacactgagccccttatcacggctactacctcagtgccgactctcaaagaacccaaacca
tgcactgtgtgtgggaagatttttaaccgtgcttcagttatggctattcatatgagatcc
cattcagatgagcgtccttatcaatgtggcaactgtgagcagcgctttaagtacatgcac
aatctgaatcaacaccagagatatatctgtaaggtgaaccgagaagagtcctctcagatg
gtagaccagcaccaagaggaggagtctagtgaactgctggctgttaaggctgatacccca
gagacatctaccggtcaactccaactggttcactggtgtaaaaaatgtggaaagtgtttc
gatgacatctgtaatttgaagcaacaccaggaaagttcatgcaaagaggaaaaaataaag
gtggtcttccaatgtgaaaaaagaaaggtggtcttcaaatgtgatgattgtgggaaggac
ttcaaaggttcatcatccctaaggacacacaagcgaattcacaacccattctattgctct
gattgtggaagggtcctcccaaactccattgcctttgacagacacaagctgatgcagcac
aaggaaatccagtgtaccatgtgtgagaagacctttaccctgttggggcgtctgagagat
cactatctgcatcaacataaattcacaggaccatacccctgctctcaatgtgagaaaact
tttacccagttaagataccttgttgaacatgagagagttcactcaggagagtacccttac
cagtgctctgtttgtcaagcaaagttcaataaagcaaattctctaacaatacacagtagg
aagcacacaggagaaaagccgttcctgtgctggcagtgtggaaagagctacaaggatcgt
ggaaacctgtcaatgcatatggggacccactcagaggagaagcccttttcttgttcgcag
tgtgacatgacttatcggacaaagattcagctgaatacacacattgaacaagttcatgag
ggggtgagatatacctgtgcagtctgtggaaagcaatttttgaaagcagtgtcattgata
agacatgaactcactcacacgggggaaagaccatggccatgctcctattgcacaaaaacc
ttcatcactgccaatgaaaggagattgcatgaaagataccatactggtgagagaccatac
aaatgccaagactgtggaaagtccttcgtacagttatgtttcctgaaatcacaccaacga
cttcacacaggagagaagccatttgcatgcagcgtttgtgacaaacgtttcagattaaat
taccataggcaaagacacgagcaaacccatacaggaaaacagaagccacatgtgtgtgcg
gaatgtgggttagctttcgctcaaagaaagcgcctgactgaacaccaatgcactcactcc
ttgagttaa
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