Salmo trutta (river trout): 115180027
Help
Entry
115180027 CDS
T08542
Name
(RefSeq) zinc finger protein 135-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115180027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115180027
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115180027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
TINF2_N
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-H2C2_5
zf-C2H2_11
Zn_ribbon_SprT
zf-C2H2_5
BDHCT_assoc
DUF629
YjdM_Zn_Ribbon
zf-Di19
Motif
Other DBs
NCBI-GeneID:
115180027
NCBI-ProteinID:
XP_029597760
LinkDB
All DBs
Position
40:918797..925827
Genome browser
AA seq
1030 aa
AA seq
DB search
MDSEFSAADNAGLPLLSLCLLVPPIQLMSASIWQVVQQRDVMNYAMLAEFVSLVTEMVPE
LLIYRHRAQLILGLRARHILELCRSEHPVEPQVILTQLYMIQPLTHFSNDVSDTEVESSE
THFLELVQTLLKDPDEREHFFTEIFPVEYGPQYDIELQTLLWEFLSRLVQLLPTPDLAQT
IAWLGTAPSVLDDCAHVISHPADLKSLLQHHKRLGHLEQHVPPCAMGDCILSSLSIPPHS
RTVISTEQTSCHNQSEPSQEFVDDFEVEIVTLTDYEEVELGLSQEVVEDGNDDEGQTMED
KEEEPKETSAEEVEEEEKVMEDHEEGGLESNSHLEEAEDDPASSHHQTSSGPHICSVCEK
SFKFASALIAHQVIHTGERPYVCNLCGRCFSFRQSLDRHKPTHKDGRVYDCLICGETFQS
LSARTEHKKSHMEEGAYQCSQCHRKFNWASAMVRHLKAHTEGTEVKTQELTKSLKSEKED
IGIKEIVGEVAIDPPETDLVLEDGGKSCHNPQEGADHKQQEGDGQSTSSEPAVLVPGLLD
KVVTLVKVRTSGRKTKPTLKVQMVNLQKLKGKVATPKRRMGGSLMNPQGFTPLHFKSEEH
SYGSPVVSTKEGDTGWCPFSCPECSFVNSDEASVQQHIETNHSGEAQEDAQSAPHQTGQA
GHYDCPDCNSSYKFQSLLKYHRRVHTGERPYVCPQCGRRFSFKQSLERHKQTHKDGRKHD
CLICGQNFKSLSAYTEHKKNHMENGVYRCSECDRRFSWKSALVRHLRTHTENATEAELSY
KCPRCDLGFSSSTYLNRHLLTHQEERLHVCSCGKNFAYKAALTAHQRTHLKERPHQCKQC
GKGFLYKGGLVSHMKIHSEEMPFMCSFCGKSFKRERNMKKHERCHTRENVFSCSQCDKTF
VYKATLTRHELTHSGERPFLCSDCGKGFFSHAELLKHERFHTGHKPFQCSHCGKQFTQSC
YLTIHLRYHTGVRPYSCTHCDKSFLSANRLKRHLRTHTGEKPYLCSECGKGFKQSYHLKM
HQQTHATKIC
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggactcggaattttcggcagcggacaatgcaggtctccctctcctctccctctgcctc
ttggttccacccattcagcttatgtcagcgtccatatggcaggtggtgcaacagcgagat
gtcatgaattatgcaatgctggcagagtttgtctccctggtgacagagatggtccctgag
ttgctaatctataggcacagggcccaacttattttgggattgcgagcaaggcacattctg
gagttgtgtcgcagtgagcatcctgtagaacctcaggtcatcttaacccagctgtacatg
attcaaccacttacccacttcagtaatgatgtaagtgacacagaggtggagtcgtcagag
actcattttctggagctggtccagaccctgcttaaagaccctgatgagagagagcatttt
ttcacagagatattcccagtggagtatggaccacaatatgacatcgagctgcagactcta
ctgtgggagttcctgtccagattggttcaactgttaccgacccctgacctcgcacagaca
atagcatggctcggtactgccccctcagtcttggatgattgtgcccatgttatatctcat
ccagcagatctgaagagtctgcttcagcaccataaacgtcttggacatttggagcaacat
gtacccccctgcgccatgggcgactgcatcctgtcctctctctccatcccgccacacagt
agaacggtgatcagcactgagcagaccagctgtcacaaccagtcagaaccctcgcaggag
tttgtggatgacttcgaggtggaaattgtaactctgacagattatgaagaggttgaatta
ggtttgagtcaggaggtggtggaggatgggaacgatgatgaagggcagaccatggaggac
aaggaagaagagcctaaagaaacgtctgctgaagaagtggaggaagaggagaaagtgatg
gaggaccatgaagaggggggcttggagagcaactcgcatctagaagaagccgaggatgac
ccagcatcctcccatcaccaaacatcctctgggccccacatctgctcagtctgtgagaag
agcttcaagtttgcctctgcactaatagcccatcaggtcatccatacaggagagcgcccg
tatgtgtgcaatctgtgcggacggtgtttctccttcaggcagtctctagacaggcacaaa
ccaacacataaggatgggcgcgtttacgactgcttgatctgtggggagacctttcagtcc
ttgtcagcccgcacagagcacaagaagagtcatatggaggaaggcgcttaccagtgctca
cagtgccacaggaagttcaactgggcatcggccatggtgagacacctgaaggctcacaca
gagggcactgaggtcaaaacgcaggaacttacaaaaagcctgaagtctgagaaagaggat
atagggattaaagagattgtaggagaggtggctattgatccccctgaaacagacctggtg
ttggaggatggagggaaatcctgtcacaatccacaggaaggagcggatcacaaacaacag
gaaggagatggtcagtccacttcgtctgagcctgcagtgttggtgcctggacttctggac
aaggtcgtaacacttgtcaaggtccgtaccagtggtaggaaaacgaaaccgaccttgaag
gtgcagatggtgaacctgcagaagctcaagggaaaggttgccaccccaaagaggaggatg
ggtggaagcttgatgaacccccaaggtttcacaccattgcattttaagagtgaggaacac
tcctatggctcaccagtggtctcaacaaaggaaggagacacagggtggtgtccattctcc
tgtcccgagtgctcattcgtcaactcagacgaggcgtccgtccagcagcacattgagacg
aaccactcgggggaagcacaggaagacgctcagtccgctccgcaccaaacaggccaagct
ggacactatgattgcccagactgtaacagcagctacaagtttcagtccttactgaaatac
catcggcgcgtccacaccggcgagcgcccatacgtgtgccctcagtgcggacggcgcttc
tccttcaagcagtcactagagaggcacaaacagacacacaaggatgggcgcaagcatgac
tgtctgatctgtgggcagaacttcaagtccttgtcagcgtacacagagcacaagaagaac
cacatggagaacggtgtgtatcggtgttcggaatgcgaccggcggttctcctggaagtct
gcgctggtaagacacctccggactcacacggagaacgccaccgaggctgagctctcttac
aaatgcccaaggtgtgacttgggattcagcagtagtacgtaccttaacaggcacctgctc
acacaccaagaggagaggttgcatgtctgcagctgtggcaagaactttgcctacaaggct
gctctgaccgcacaccagcgcacccacctgaaagagaggccacaccagtgcaagcagtgt
ggaaagggtttcctctacaagggagggctggtaagtcacatgaagatccactccgaagaa
atgcctttcatgtgctcattctgcgggaagagcttcaagagggagaggaacatgaagaaa
cacgaacgctgccacaccagggagaacgtgttcagctgctcgcagtgcgacaagaccttt
gtgtacaaggccacactgaccaggcacgagctaacccactcgggggagagaccgttcctg
tgctccgattgtggcaaagggtttttctcccatgcggagcttctaaagcatgagcgcttc
cacacgggccacaagccgttccagtgctcccactgcgggaagcagttcacccagtcctgc
tacctgaccattcacctgcgctaccacacaggggtacggccttactcctgcacccattgt
gacaagagctttctcagcgccaaccgtctaaagagacacctgagaacccacacaggagag
aaaccctacctgtgttcggagtgtgggaaagggttcaaacagtcatatcacctcaagatg
caccagcagactcatgccactaagatttgctga
DBGET
integrated database retrieval system
