Salmo trutta (river trout): 115180029
Help
Entry
115180029 CDS
T08542
Name
(RefSeq) zinc finger protein 883-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115180029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115180029
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115180029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_8
zf-C2H2_6
DUF5795
TRAF6_Z2
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
115180029
NCBI-ProteinID:
XP_029597764
LinkDB
All DBs
Position
40:880675..889921
Genome browser
AA seq
692 aa
AA seq
DB search
MPQPPTSKSEITSLLKTPSPPGPSHQGTLDTITSSNTCSVCGRFFTRTSSLVRHMSSHSK
EHPFRCVNCGKRFKYSYDFRKHQKELCQKVTQGDLCQDVGQNMAQQKSGLQPEVFLATAE
NQAQVDSKTCYVCGKILTCTSQMERHLKSHSKARPFHCAICERSFKYKDSLKKHQEILGH
KGILEDFGLSVDHQQVDVNTESCSSPLTTKENYTEPLIKAFTPAPTAKEHACTVCGKILD
CASHLATHMRSHSVERPYQCVNCEQRFKYKQSLNQHQRYICKVNREESSQMVDQHQEESS
ELLAVKADTPETSTSQLQLVHWCKKCGKSFDDTCNLKQHQESSCKEEKRKVVFQCEKRKV
VFKCDDCGKDFKGSSSLRTHKRIHNPFYCSDCGRVLPNSIAFDRHKLMQHKEIQCTMCEK
TFTLLGRLREHYLHQHKFTGPYPCSQCEKTFTQLSYLVIHERVHSGEYLYQCSVCQAKFN
SANSLTIHSRKHTGEKPFLCWQCGKSFKAAGELSVHMGTHSEERPFSCSQCDMSYRTKLQ
LNSHIEQVHEGVRYPCTICGKQFYKAVSLKRHELTHTGERPFPCSYCTKTFITANEKRLH
ERYHTGERPYKCQDCGKSFIQSGYLKSHQRLHTGEKPFVCSFCDKSFRLFYHRLKHERTH
TRKNKPYVCEECGLAFAQRKRLTEHLCTHPVN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgccacaacccccaactagcaaatctgagatcacatcactcctcaagactccctctcca
ccagggccatctcatcaaggaactctggacactatcacatcctctaacacatgctctgtg
tgtgggaggttttttactcgtacttcaagcttggtgaggcacatgagctcccactcaaaa
gagcatccatttaggtgtgtcaattgtggtaagagattcaagtattcatatgattttaga
aaacaccagaaagaattgtgtcagaaagtgacccagggagatttgtgtcaggatgttggt
cagaacatggcacaacaaaagagtggcctgcaaccagaggtttttcttgccactgcagag
aatcaagcccaggtagattccaaaacctgttatgtctgtggtaagattttgacttgtacc
tcacagatggaaaggcacttgaaatctcactcaaaggcacgtccctttcattgtgctatt
tgtgagagaagctttaagtacaaagactctttgaagaaacatcaggaaatccttggccac
aagggcatcctagaagactttggcctgagtgtggaccatcaacaagtggacgttaacaca
gagagttgcagcagccctctcactaccaaggaaaactacactgagccccttatcaaggct
tttactccagcaccgactgccaaagaacatgcatgcactgtgtgtgggaagattttggac
tgtgcttctcatttagctactcatatgagatcccattcagtggagcgtccttatcaatgt
gtcaactgtgagcagcgttttaagtacaagcaaagtttgaatcaacaccagagatatatc
tgtaaggtgaaccgagaagagtcctctcagatggtagaccagcaccaagaggagtctagt
gaactgctggctgttaaggctgataccccagagacatctaccagtcaactacaactggtt
cactggtgtaaaaaatgtggaaagagtttcgatgacacctgtaatttgaagcaacaccag
gaaagttcgtgcaaagaggaaaagagaaaggtggtcttccaatgtgaaaaaagaaaggtg
gtcttcaaatgtgatgattgtgggaaggacttcaaaggttcatcatccctaaggacacac
aagcgaattcacaacccattctattgctctgattgtggaagggtcctcccaaactccatt
gcctttgacagacacaagctgatgcagcacaaggaaatccagtgtaccatgtgtgagaag
acctttaccctgttggggcgtctgagagaacactatctgcatcaacataaattcacagga
ccatacccctgctctcaatgtgagaaaaccttcactcagttatcgtaccttgtcatccat
gagagggttcactcgggagagtacctgtaccaatgctctgtttgtcaagcaaagttcaat
tcagcaaattctctaacaatacacagtaggaagcacacaggagaaaagccgttcctgtgc
tggcagtgtggaaagagcttcaaggctgctggagaactgtcagtgcatatggggactcac
tcagaggagagaccattttcctgttcgcagtgtgacatgtcctacagaacaaaacttcag
ctgaattcacacattgaacaagttcatgagggggtgagatacccttgtacaatctgtggg
aagcagttttacaaagcagtgtcattgaaaagacatgaactcactcacacaggagaaaga
ccatttccatgctcctattgcacaaaaaccttcatcactgccaatgaaaaaaggctgcat
gaaagataccatactggtgagagaccatacaaatgccaagactgtggaaagtctttcatt
cagtcaggttacctgaaatcacaccaacgtcttcacacaggagagaagccatttgtatgt
agcttttgtgataaaagtttcagattattttatcataggttaaaacacgagcgaacccat
acaagaaaaaataagccatatgtgtgtgaagaatgtgggttagctttcgctcaaagaaag
cgcctgactgaacacctatgcactcaccccgtgaattaa
DBGET
integrated database retrieval system
