Salmo trutta (river trout): 115180042
Help
Entry
115180042 CDS
T08542
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stru03009
]
115180042
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
90S particles
Other 90S particles
115180042
Pre-60S particles
Other pre-60S particles
115180042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_EML_2
WD40_RFWD3
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD_LRWD1
Beta-prop_TEP1_C
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
115180042
NCBI-ProteinID:
XP_029597794
Ensembl:
ENSSTUG00000044206
UniProt:
A0A674DTP7
LinkDB
All DBs
Position
40:8040641..8046370
Genome browser
AA seq
493 aa
AA seq
DB search
MSSQITCVGWVKRGVSKETPDKVELSKEELQRIIAEAKEQLGERVGEEEEDDEGMASGQE
QSDEAEAVQGQEPEQDENEAGREEADELAEYGLDRYDEEDSVTANLGDSLAGLTVFSTNE
EDPYITIKDTDQYEREDFQIKPNDNLIISGRAEKDSCNLEIHVYNAEEESLYVHHDILLP
AYPLCVEWLNFDPSPEGTGNYAAVGNMTPQIDVWDLDVVDCLEPAFTLGSKKASKKKKKS
KKAAAEPVEGHTDAVLDLSWNKLVRNVLASGSADKTVILWDLAQGKPATTLRRHTDKVQT
LMFHPFEAQTLISGSYDKSAILYDCRSPDSSHRTWRFSGQVERVAWNHFSPCNFLASTED
GFIYCLDARSDKPVFTLRAHDGEVSGLDLSSQIRGCLVTSSADKHVKIWDILGNKPNLVH
TRDMKMGVLFCAACCPDMPFVYAFGGQRDGLRVWDISDVAAVAKVFGNRERLVATTAPEA
SSSTSSTADMELS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaaatcacttgtgttggatgggtaaagcgaggcgtttcgaaggaaacacca
gataaggtggagttgagcaaagaagaattgcaacgcattatagcagaggcaaaagaacaa
ttgggtgaacgtgtaggtgaagaggaggaggatgatgaaggcatggccagcgggcaggaa
cagagtgacgaggcagaagctgttcagggacaggagccagagcaagatgaaaatgaagca
ggaagggaggaagctgatgaactagcagagtatggtttggatagatatgacgaggaagac
tcggtgactgccaaccttggtgacagccttgccggcctcacagtgttcagcaccaatgag
gaggatccttacattaccatcaaagacacagaccagtatgagcgagaggactttcaaatc
aagcccaatgataacctcataatttcaggcagagcagagaaggactcctgcaatctggag
attcacgtatacaacgccgaggaggaatccctctatgttcaccatgacatactcctgcca
gcctatccattgtgtgtggagtggcttaactttgaccctagtccagaaggcacaggcaat
tatgcggctgtaggcaacatgacaccgcagatcgacgtgtgggacctggatgtggtggac
tgcctagagcctgccttcaccctggggagcaagaaggcctccaagaagaaaaagaaaagc
aaaaaggctgcagcagagccagtggaaggtcatacagacgctgtactggacttatcctgg
aacaaactggtccgcaacgtcttggccagtgggtcagccgacaaaaccgtgatcctgtgg
gatctggcacagggaaagccggcaacaacactgcgcagacacactgacaaggttcagacg
ttgatgttccacccctttgaagctcagaccctgatatcaggatcatatgataagtcggca
atcctgtatgactgccgcagcccggacagcagccatcgcacttggaggtttagcgggcag
gtggaaagggtcgcctggaaccacttctcgccctgcaacttcctggcgagcacagaggac
ggctttatttactgtctggacgcgcgctcggacaagccagtgtttacgctaagggcacat
gacggagaggtgtcaggcttggaccttagcagccagatccggggatgcttggtcacctcg
tcagcagacaaacacgtcaagatttgggacatcttggggaacaagcccaatctggttcac
acccgggacatgaaaatgggggtgctgttctgtgcagcatgctgtcctgacatgcccttt
gtatatgcctttggaggacagagggatggcctgcgggtttgggacataagtgatgtggca
gcagtcgctaaggtgtttggcaatcgggagcggttggtagcaaccacagcgcctgaggca
tccagcagcacttcctccacagcagatatggagctttcctag
DBGET
integrated database retrieval system
