Salmo trutta (river trout): 115180239
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Entry
115180239 CDS
T08542
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04514
Cell adhesion molecules
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115180239
04514 Cell adhesion molecules
115180239
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115180239
09142 Cell motility
04820 Cytoskeleton in muscle cells
115180239
04810 Regulation of actin cytoskeleton
115180239
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115180239
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115180239
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
115180239
NCBI-ProteinID:
XP_029598036
Ensembl:
ENSSTUG00000008399
UniProt:
A0A673XJ74
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All DBs
Position
3:complement(56831827..56887742)
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AA seq
1056 aa
AA seq
DB search
MCAYRMCAFGGMMCRVVLVLWLVLSVVSGFNLHAERPAVYRGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPPNPDPTKQPYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKVDGEKDPVGTCFVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVPGEKHTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQKDLTARGLTLSQELYGAWTSSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRTRPVVSVEAEMILTPRILNPDDRSCLLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGLRGGVKRVHFLDSHQPQHTEALTLGNSRPHSCLNYTVYLREEDEFRDKLTP
ISLALNYSLAPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNKCIPDLQLSASMDRTEL
VVGDDNLVMLTINAVNKGEGAYETELHTLLPPEADYIGVERRIESLSRLNCEYRMVNDSR
LVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHVDFDLQIHSSNEDNSKSNPVSLSLSIS
ARAQLDLRGVCHPSQVVLPFPHWEPKENPVKEDDVGPQVTHIYELHNSGPSSIREAELQV
GWPSRFRDEHLLYALEVLTDGPISCRSNTSLNPLGLQTSSVQDTPELLGFLRNSSSPHRY
RRATSAAQPYSSKTLNCSNIICLGVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYL
LNSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAVPLWVIILAILLGLLVLA
MLTLAMWKCGFFDRARPPADDVSDREQLTSDQLADA
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcctataggatgtgtgcatttggtgggatgatgtgtcgcgtggtgttggtgcta
tggcttgtcctttcggttgtctcgggcttcaacctgcatgcggagcgccctgcggtgtac
cgaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacgtcccagccaggcatc
atagagggaggagcagtctactactgtccctatcccccaaaccctgaccccaccaagcaa
ccctacagctgtacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggcaaagtggtggcctgtgctcctctctaccactggcgtactgtgaaggtggac
ggtgagaaggacccggtaggaacctgctttgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggcggacctggcagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagccgtgctcaggagagtccctggagagaaacacacacacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggtgttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggctgttactgacctcaacggagacgggtatgatgatgtactggtaggagca
cctctctacatggagagagagagggagagtaagcccaaggaggtgggccgtgtctacctg
tacctccagcactccccgctcaccttctccgagccccttctcctgacgggaacacacacc
ttcggacgctttggcactgccatcgccccgttaggtgacctcaaccaggacggatacaac
gacgtggcagtgggttgtccgtttggtggggaggaccggagtggcctggtgttgatctac
aatggccagaaagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tggacctccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacaggactcgtcctgtagtgtcagtggaggcagagatgatcctgactcctagaatcctg
aaccctgacgaccgatcctgcctcctgacagaatctgataccatggtaacctgtctcagg
gtagatatttgtgcgaaggtgagcggtgtggggatcccagactctgtagtcctgaatgca
gagctgcaactggattggcttaaaggtttgaggggtggagttaagagagttcatttcctg
gattcccatcagccccagcacacagaggccctaacgcttggcaacagccgtccgcactcc
tgcctgaactatactgtctacctacgagaggaggatgagtttagggataaattgactccc
atctcattggctctgaactatagtttagcccctccttccaacctggatctcccccctgtc
ctcaaccgctacagcagtaccttcctgcaggaacaggcatatattctgctggactgtggg
gaagacaacaagtgtattccagacctccagctgtctgcaagcatggaccgtacagagctg
gtggtcggggatgacaacctggtcatgttgaccataaacgcggttaacaaaggagagggg
gcatatgagactgagctacacacactcctaccccctgaggctgattacataggagtggaa
cgcaggatagagtctctatccaggttgaactgtgagtacaggatggtgaatgactccaga
ctggtggtgtgtgacctggggaaccctatggttgccggaacagaagtatctgtaggttta
aggtttgctgtccaaaggctggatgatgccggtcctcacgttgactttgacctacagatc
cacagttcaaacgaagacaactccaagagcaacccagtcagtctgtctctctccatctct
gcgagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgttt
cctcattgggagcccaaagagaatccggtcaaagaggatgacgtaggaccccaggtcaca
cacatctacgagctccataactcaggtcccagtagtatccgggaggcggagctccaggtg
ggctggccatctcgtttccgtgatgaacacctgctctacgctctggaggttctaacagat
ggaccaatcagctgccggagcaacaccagcctcaaccccctgggcctgcagacatcctct
gtccaggacactccagaattgttgggctttctgagaaacagtagctctcctcaccgctac
agacgagccaccagtgctgcccagccctacagcagcaagaccctgaactgcagtaacatc
atttgtctaggagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtc
aagatccgctcccgactctgggcccacaccttcctccagagacgtaacgacccatacctc
ctcaactctaccgtgtccttcagagtgacggccctgccctaccgcctccaaccctcctcc
ttaccccaacacaccacttcaatgggtacactggtgctgtgggggactcctgatgtggcg
tttgctgttcctctgtgggtcatcatcctggccatcctactgggactgttggtcctggcc
atgctaacactggccatgtggaagtgtgggttctttgaccgggcacggccgccagcggat
gacgtgtcagaccgtgagcagctgacctctgaccaattagcagacgcctaa
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