Salmo trutta (river trout): 115180305
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Entry
115180305 CDS
T08542
Name
(RefSeq) non-muscle caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
stru
Salmo trutta (river trout)
Pathway
stru04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
115180305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115180305
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115180305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
115180305
NCBI-ProteinID:
XP_029598149
LinkDB
All DBs
Position
40:19712445..19767109
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AA seq
526 aa
AA seq
DB search
MDDDFERRRELRRQKREEMRLEAERMAFQGSNEDEEEAARERRRRARQERMRGMGGEEPS
DSVVMTNSHSVTESVSVSSSSVTSSGGGDDDEQALLERMAKREERRQKRMMEALEREKDQ
NPGNAGNHGSGENSVDEKSVGRRGRYQDNEEEVEERNCRKNEKEEGEAAPEEEEAEQGEE
EEEEEVAEEKPRRSYMREQESIDEKTRNEVNEKQNGGLHEETPPKHKKTERTLSRGSVRS
LEAGAEEQDDAARLEAELKLEELKRRRDDAESEEFERMRQKQQEAEQELEELKKKREERR
KIIEEEERQKKQEEAEKKDREEEEKRRMKEEIERRRAEAAEKRQQMGVEPVDGEAKPFKC
FSPRGSSLKIGERAEFLNKSAQKSTVKTSHSPVVSKIDNRLEQYTSVAQNKEMRSPRSGA
VDLPMVTDGIRNIKTMWEKGNVFNSPGGGGATYKEAAGMKIGVAGRINDWLNKTPESKTP
GGRPADLKPGDVTNKRSLWENKGSSPGKVTGRGENKSVANAGMGHE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgactttgagcggcgcagagagctcaggaggcagaagagggaggagatgcgc
ctggaggctgaacggatggccttccagggtagtaatgaggatgaggaggaggctgcaagg
gagcgtagacgcagggcacgtcaggagaggatgagagggatgggaggcgaggagcccagt
gacagcgtggtgatgaccaacagccacagtgtgactgagagtgtgtcggtgtcctcctcc
tctgtgacctcctcgggtggaggagacgatgatgagcaggccctgctggagcgcatggcc
aaacgagaggagcgcaggcagaaaagaatgatggaagctctggagcgagagaaggatcag
aaccccggcaatgccggtaaccacggcagcggggagaatagtgtggatgagaagtctgtc
ggccgcaggggccgttaccaagacaacgaagaagaggtggaagagcggaactgccgaaag
aatgagaaggaggagggggaggctgctccggaggaggaagaggctgagcagggagaggaa
gaagaggaggaagaggtggcggaggagaaaccgagacgatcctatatgagagaacaggaa
tccattgacgaaaaaactagaaacgaggtgaatgaaaagcagaatggaggtctgcacgag
gagactcctccaaaacacaaaaaaacagaaaggaccctgagccgcggcagcgtgcgctcc
ctggaggcgggggcggaggagcaggacgatgcggcgcgcctggaggcggagcttaagctg
gaggagctgaagcgtcgccgtgacgatgcggagagcgaggagtttgagaggatgagacag
aagcagcaggaggctgagcaggagctggaggagctgaagaagaagagggaggagaggagg
aagatcatagaagaggaggagagacagaagaaacaggaggaggccgagaagaaggacaga
gaggaggaggagaagaggaggatgaaggaggagatagagaggaggagggcggaggcggcc
gagaagagacagcagatgggggtggagcctgtcgacggagaggccaagcccttcaaatgc
ttcagccccagaggatcctccctcaagattggagaaagggcagagtttctgaacaagtcg
gcacagaaaagcacggtgaagacgtctcactctcctgtcgtctctaagattgacaacaga
ctggagcagtacacctctgttgcccagaacaaggagatgcggtccccacgttccggtgcc
gtggacctgcccatggtgacagatgggatacgcaacattaagaccatgtgggagaaagga
aacgtgttcaactcgcccgggggcggcggggccacgtacaaggaagcagctgggatgaag
ataggtgtggcgggccgcatcaacgactggctgaataaaaccccggagagcaaaacgccg
ggaggaaggcccgcggatctgaagccaggtgatgtgactaacaagagaagtctgtgggaa
aacaagggatcctccccaggcaaggtgactggcagaggggagaataaatctgttgccaat
gcaggtatgggacacgaatga
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