Salmo trutta (river trout): 115180354
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Entry
115180354 CDS
T08542
Symbol
slco1c1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1 isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
stru
Salmo trutta (river trout)
Pathway
stru04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115180354 (slco1c1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115180354 (slco1c1)
Transporters [BR:
stru02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
115180354 (slco1c1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
115180354
NCBI-ProteinID:
XP_029598260
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All DBs
Position
40:17747309..17814705
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AA seq
730 aa
AA seq
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MPRNSIRVTLPKENESHLCRMEPAAKERGTTENGGSSSTRAQRSSCSSLKMFLVALSFAY
FAKALSGSYMKSTITQLERRFDIPSYLTGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIA
MGCVLMAMGTFIIALPHFLIGRYKFETSIRSSVNSTNNLSPCPARLLSPAALASGDPLSK
APGTGTVGCEGESNLSMWIYVFLGNVLRGIGETPVQPLGISYIDDFAREENAAFYIGCVQ
TIAVIGPVFGYLLGSLCAKIYVDIGFVNMESITISPGDARWVGAWWLGYLIAGVITLLSA
IPFWFLPRSLPIPSDRGPAQCTPEQISFINDSPLLEHKYQADEPASFLEMAKDFIPTLKT
LLGNPVYFIYLCVTIIQLNSLIGMVTYKPKYIEQHYGQSASKANFLMGTINIPAVALGIF
TGGLLMKRLKLSIMGAAKFAFGTSLIGYFLSLFFFAMSCENAKVAGITLPYNRVDGVSYE
ERSVFSACNSDCVCSDRDWDPVCGENGITYVSPCLAGCQTSTGSGKNTVFSNCSCVVVAG
LSSGNLTASVGHCPHRDDCDRVFPYFLALSVITSFIISLGGTPGYMVLIRCIKPQLKSLA
LGFHTLSTRTLAGIPAPIYFGAIIDTTCLKWGQKRCGGRGACRIYNTTAYRIAYLGLTMG
LRTVSFLLCILGFVLLKRHLRREERSAHQVANGGAELEVLRKEEVLASNSDQSLRTSTTD
YNNTERETRL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaattccataagggtaactttgcccaaggaaaacgagagccatctgtgtagg
atggagccggcggccaaggagagagggacgacagagaacggaggcagctcctcgacgagg
gcgcaacgctcctcctgctccagcctcaagatgttccttgtggctctgtcgtttgcctac
tttgccaaggccttgtctggcagctacatgaagagcacaataacccagctggagaggcgc
tttgacatccccagttacctaacaggcgtcatcgacgggagctttgagataggtaacctg
ttggtgatagcattcgtgagttactttggtgcaaagctgcatcggcccaagatcatagcc
atgggctgtgtactaatggccatgggaacattcatcatcgctctgccacacttcctcatc
ggacgctataagttcgaaacgtcaatccgatcgtcagtgaattcaaccaataacctctct
ccatgtccagcgcgcctgttgtcacccgccgcgctagcttcgggtgacccgctttctaag
gcaccaggcacaggaacagtaggttgtgaaggagagtccaacctctccatgtggatctat
gtgttcctggggaacgtcttacgagggatcggggagacgccagtgcagccccttgggatc
tcgtatatagatgatttcgccagggaggaaaatgctgcattttacattggctgcgttcag
accatagcagtcattggtcctgtgtttggctatttactgggatccctgtgtgccaaaata
tatgtggacattggatttgtcaacatggagagtatcaccataagccctggtgatgctcgc
tgggtgggggcctggtggttaggttaccttatagctggggtgatcaccctgctttcagcc
atccccttctggttcctgccccgttccctgcccatcccgtcagaccgaggcccagcccag
tgcaccccggagcagattagcttcatcaacgactcccctctcctggagcataagtaccaa
gccgacgagccagccagctttctggagatggccaaagatttcataccaacgttgaaaacc
ctcctggggaacccagtgtacttcatctacctgtgtgtgaccatcattcagctgaactct
ctcatcggcatggtaacctacaagcccaagtacatagagcagcattacggacagtcagca
tcaaaagccaatttcctgatgggtacaatcaacatccctgccgtggcgttgggaattttc
actggcggcctgctcatgaagaggctgaagctgagcatcatgggagcggccaagtttgcg
ttcggcacctctctgataggctacttcctatccctcttcttcttcgccatgagctgcgag
aacgccaaagtggctgggatcacgctgccctacaaccgggtggatggtgtatcgtatgag
gagcgctcagtattctcagcctgtaactcagactgtgtgtgttcagacagagactgggac
cctgtctgtggagagaacggcatcacgtacgtctctccctgcctggctggctgccagacc
tccacaggatcagggaagaacacggtgttctctaactgtagctgtgtggtggtagcaggg
ctgagcagtggtaacctgacagccagtgtaggccactgtcctcacagagacgactgtgac
cgtgtcttcccttacttcctggctctctctgtcatcacttcctttatcatctccctgggt
ggcacgccaggctacatggtcctcatcaggtgtatcaagcctcaactgaagtccttagct
ctggggttccatactctgtccacacgcacacttgcgggcatcccagcgcccatctacttt
ggggcgatcatcgacaccacgtgtctgaagtggggccagaagagatgcggagggagagga
gcctgtcggatatacaacactacagcatacaggatagcttacctgggtctaactatgggc
ctgaggacagtttccttcctgctgtgtatactgggattcgtgctgctcaaacgacacctg
cggagagaggaacgcagtgcccaccaagtggccaacggcggagcagaactggaggtactc
aggaaagaggaagtcctagcctccaactcggaccaatcgctacggacttccacaacagac
tacaacaacacagagagagagacacggctgtga
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