Salmo trutta (river trout): 115180441
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Entry
115180441 CDS
T08542
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115180441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115180441
03041 Spliceosome [BR:
stru03041
]
115180441
03032 DNA replication proteins [BR:
stru03032
]
115180441
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
115180441
Spliceosome [BR:
stru03041
]
Complex A
U1 snRNP components
Sm proteins
115180441
U2 snRNP components
115180441
Complex B
U1 snRNP components
115180441
U4/U6.U5 tri-snRNP components
115180441
Complex C
U2 snRNP components
115180441
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
115180441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
115180441
NCBI-ProteinID:
XP_029598384
Ensembl:
ENSSTUG00000030214
LinkDB
All DBs
Position
40:11558676..11560336
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDSYMNMQLANTEEYVDGALAGHLG
EVLVRCNNVLYIRGVEEEEEDGEMKE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacctctgaaccccaagcccttcctgaacggcctgacaggcaagccggtgatg
gtgaagctgaagtgggggatggagtacaagggttacctagtgtctgtggacagctacatg
aacatgcagttggcgaacacagaggagtatgtggatggagcgttggctggtcaccttgga
gaagtacttgttaggtgcaataatgttttgtatattagaggagtggaggaagaagaggag
gacggagaaatgaaagaatga
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