Salmo trutta (river trout): 115180461
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Entry
115180461 CDS
T08542
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115180461
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115180461
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
115180461
NCBI-ProteinID:
XP_029598423
Ensembl:
ENSSTUG00000046012
UniProt:
A0A674E504
LinkDB
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Position
40:complement(16117259..16125673)
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AA seq
942 aa
AA seq
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MVQLSPSPARDVSPSPECSEKGRQGSPKAGSPKMGSPGGLSSLQLALAASTTIYQGYESY
IEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAVEKYDEVIHNLQFAQELH
KTLGGLTQELLKAQKKALKKEQMAKQEVEKRRLCVVLQVKFLLQTLLQHERIRKDLLSAR
NPQLQVAELQSLLELAELLGVKRDNNVSLEEQMESAALVYLDLLEGKNKAVAGTTYKVLK
AKLAKLMDCGYFDCVPPPPSNSPKEVEVPMTKKTVSQTASLSTLMTSNQKDMPSREFLNR
HYLPDTDPNGCRDTPVTPNWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVFISK
VPVTTKKQNAEPKQRRVKSKRERDATAALRVDTPVEVFNSQSSLPKDPILRKQQLEDLMT
KIRGSFSFMQDSLLDGEGSPTNGHPRLGRRASGSPSPLVQRESRRSPVDHLPKTLHSTPL
PSKLLPVDDEPNLTNGDGGCLESCDLDLTTEDLAHVITIEPCLLLSESETACPSPPPFYR
RESSMSITLDEKTSARTTISESGKQSPCNGVVPPCTPTPTQGQLFSTPPSRRTLSMVPSV
PFQTMHSVFKVNAPLLPTGDFKSDIIPYSDSNDLCYVTTSTQTPPEFAPLEDEHLQSVNQ
SECLVGSGGQIFLSPSQSGGTMGCSDQSYYRGSVRGIARGGKGLAHSYFRSSGGHRGGSF
IPQAHLYGARDTGYQPSYRRGGGNAGQRHNNGGWSDSSQVSSPDREGNYSLVDSAHGDSL
QGVGMDLTPQVTPHALMHVPMYPLPQHPQPLRVAFTAARTANYTPGTLDQPIAFDQLHSN
LGEMFNTNVGRFTCPANGTYVFLFHILKLAVNVPLYVNLMRNDEVMVSAYANDGAPDHET
ASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccatccccagcccgggatgtgtccccttcacctgagtgctccgag
aaggggaggcaggggagcccgaaggcaggtagccccaagatgggctcccctggtgggctg
agttctctccagctagccctggcagcttccactaccatctaccagggctacgagagttac
atcgaggacggcctcatctgcctcaagcacaagatccgcaacctggagaaaaagaagatt
aaattggaggactacaggaagcgtttgaaacatggggaatcactcaatcaagaccagata
gatgcagtggagaagtatgatgaagtgatccacaacctgcagtttgcccaggagctgcac
aagacccttgggggtttaacacaggaactgctaaaggcccagaagaaggcattgaagaag
gagcagatggccaagcaggaggtagagaagaggaggctgtgcgtagtgctgcaggttaag
ttcctcctgcagaccctgctgcagcacgaacgcatcaggaaggacctcctctctgcccgc
aacccccagctccaggttgcagagctacagagcctgcttgagctcgctgaactactgggg
gtgaagagggacaacaatgtgagtttggaggagcagatggagagcgcagccctggtctac
ctggacctgctggaggggaaaaataaagcagtagctggaaccacctacaaggtcctgaag
gctaagttggcgaagctgatggattgtgggtactttgattgtgtaccgccgcctccgagc
aatagtcccaaggaagtagaggttcccatgaccaagaagacggtgtctcaaacagccagc
ctctctaccctaatgacgtcaaaccaaaaagacatgcctagcagagagtttcttaacaga
cactacctgcctgacacagaccccaatgggtgtcgagacactcccgttactccgaactgg
aaggctgagttccaggccatgaaggaacaggagccaccggactcgtgggatatggagtcc
gactccactcagcctgtaatccagaaaccatggagaggggcggctgttttcatctccaaa
gtgccggttactaccaagaaacaaaatgctgaacccaaacagagaagagtgaagtctaaa
agggagcgggacgccacagctgcacttcgtgtggacacccctgtggaggtgttcaactcc
cagtcttccttgcccaaggaccccatcctgcgcaagcagcagctggaggacctgatgacc
aagatcagaggctccttcagcttcatgcaggattctcttctggatggagaaggatcaccc
actaacggccatcctagactgggccggcgtgcctctggatccccctctccactcgtacag
agagagtcaaggagaagcccagtggaccatctccccaaaacactgcattccactccgttg
ccttctaaactcctccctgttgatgacgaacccaatctgaccaatggcgacgggggttgt
ctagagagctgtgacctggacctaactacagaggacctagctcacgtcataaccattgag
ccatgtctgctgctgtctgagagtgagactgcctgcccctctcctcctcccttctaccgt
agggagtcatccatgtccatcaccctggacgagaagacctctgctcggactaccatctct
gaatctgggaagcaatccccctgtaacggggtggtgcctccttgtaccccaacccccacc
caggggcagctgttttctacccctcccagcagacgtacactcagcatggtcccctctgtt
cccttccagaccatgcattcggtattcaaggtgaacgcccccttacttccgactggagac
tttaaatctgatattatcccctattcggactccaacgacctgtgctatgtcaccaccagc
acccagaccccaccggagttcgctcccctggaggatgaacacctacagtcagtgaaccag
tctgaatgtctggtgggtagtggtgggcagatcttcctgtcccctagccaatcaggtggc
accatgggctgttctgaccaatcatactacagaggatctgttagaggtattgcacgtggt
ggcaaggggctggcacactcctactttcgctcttctggtgggcacagaggaggaagcttc
atcccccaggctcacttgtacggcgctcgggacactggctaccagccaagctacaggcgt
ggtggaggcaatgcaggacaaaggcacaataatggtggttggagtgactcctcccaggtg
agcagcccagaccgggagggcaactactccctggtggactctgcccacggcgactcactg
cagggtgttggcatggacctcaccccccaggtgacccctcatgccctgatgcatgtaccc
atgtacccgctcccccagcatccccagcccctccgtgtggccttcacagcagcccgcaca
gccaactacaccccgggcaccctggaccagcccatcgcctttgaccagctccacagcaac
ctgggggaaatgttcaacaccaacgtgggtcgtttcacctgcccagccaacggcacctac
gtcttcctcttccacatcctcaagctggcggtcaacgtgccgctctacgtcaacctgatg
cgcaatgacgaggtgatggtgtctgcgtacgccaacgacggggctccggaccacgagacg
gccagcaaccactccatcctgcagctgtaccagggagaccaggtgtggctgcggctgcac
cgcggctctatctatggcagcagctggaagtacagcacattctctggcttcctgctctac
caggactga
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