Salmo trutta (river trout): 115180474
Help
Entry
115180474 CDS
T08542
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115180474
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115180474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
115180474
NCBI-ProteinID:
XP_029598435
Ensembl:
ENSSTUG00000050683
LinkDB
All DBs
Position
40:complement(13508630..13672908)
Genome browser
AA seq
562 aa
AA seq
DB search
MLELSSELGFVQSVCVDGICCPPSAPHPTGGSMRADDLLLSNGTAGKMNGALEHSDQPDP
DAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRKAAL
EAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSAFGQ
IEECRILRGPDGLSRGLSQREANVKGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVV
KFADTQKDKEQRRLQQQLAQQMQQLNNATTWGSLTGLGGLTPQYLAVRGHATSPTPYCSP
AANASVAAALLQQATSSSNLGAFSGIQQMAGMSALQLQNLATLAAAAAAAQNSAGPNANP
LSSNAASLGALASPANSSGMTSLTSLGTLQGLAGATMGLNNINALAVAHMLSGMAALNGG
LGGAGLTNGTAGTMDALTQAYSGIQQYAAAALPTLYSQSLLQQQGAAGSQKEGPEGANLF
IYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNG
FQIGMKRLKVQLKRSKNDSKPY
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgttggagctctcgtccgagctgggctttgtgcagagtgtgtgtgtcgacggcatatgc
tgccccccctctgcaccccaccccaccggcggatccatgagggccgacgatctgctgctg
agtaacggcacggccgggaagatgaacggggcgctggagcattcggaccagcccgaccca
gacgccatcaagatgttcgtgggccagatccctcgctcctggtcagagaaggagctgaag
gagctgtttgagccctacggggccgtctatcagatcaacatcctccgagaccgcagccag
aaccctccacagagcaaagggtgctgttttgtcacgttttacacacggaaagctgccctt
gaagcccagaatgcattacataacataaagaccttaacagggatgcaccatcccattcag
atgaagcctgcagacagtgagaaatcaaacgcggtggaggacaggaaactgttcatcggc
atggtgtcgaagaagtgcaatgagaacgacatccgggtgatgttctccgcgtttggacag
atcgaggagtgccggatcctgcgagggcccgacggactcagcagaggcctcagccagagg
gaagccaacgttaagggatgtgcgtttgtcacgttttctaccagggctatggcacagaat
gcaatcaaagccatgcaccagtctcagactatggagggttgctcgtctcccatcgtggtg
aagtttgccgacacgcagaaggacaaggagcagcggcgcctgcagcagcaactggctcag
cagatgcagcagctcaacaacgccaccacctgggggagtctgacagggctgggtggcctc
accccgcagtatctggctgtaagaggacacgccacgtcgcccaccccttactgcagcccc
gcagccaacgcatccgtcgccgccgcattgcttcagcaggccacctcctccagtaacctg
ggagccttcagtgggatccaacagatggcaggtatgagtgctctgcagttgcagaacctg
gccactttagcagcggcagcagcggcggcccaaaactcagccggccccaacgcaaacccc
ctgtcctccaacgcggcctccctcggagcgctggccagcccagccaactcctcgggcatg
acctctctgacctctctgggcactctgcagggcctggctggcgccaccatgggtctgaac
aacattaatgcactagcagttgctcacatgctctcaggtatggcagccctgaacggaggc
ctgggcggcgcggggctgaccaacggcacggcgggcaccatggacgcgctcacacaggcc
tactcagggatccagcagtacgctgccgcagccctgcccaccctctacagccagtccctg
ctgcagcagcaaggtgccgccggcagccagaaagaggggcctgaaggtgccaacctgttc
atctaccacctgccccaggagtttggggaccaggacatcctgcagatgttcatgcctttt
ggaaacgtggtctctgccaaagtcttcattgacaaacagacaaacctgagcaagtgcttc
ggcttcgtcagctatgacaatcctgtgtcggcgcaggcagccatccaggccatgaatggc
ttccagatcggcatgaagaggctgaaggtgcagctcaagcgctccaagaacgacagcaaa
ccatactga
DBGET
integrated database retrieval system
